RNA–Protein interactions for RNA: ENST00000302190.8

SDC2-201, Transcript of syndecan 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDC2, Length 3,759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-201ENST00000302190 ZNF440Q8IYI8 595 aa12.74□□□□□ -0.37
SDC2-201ENST00000302190 CMBLQ96DG6 245 aa12.74□□□□□ -0.37
SDC2-201ENST00000302190 SEMA6CQ9H3T2 930 aa12.74□□□□□ -0.37
SDC2-201ENST00000302190 BANF2Q9H503 90 aa12.74□□□□□ -0.37
SDC2-201ENST00000302190 A0A0B4J2A0 478 aa12.74□□□□□ -0.37
SDC2-201ENST00000302190 RAB19A4D1S5 217 aa12.74□□□□□ -0.37
SDC2-201ENST00000302190 DHPSP49366 369 aaPredicted RBP12.74□□□□□ -0.37
SDC2-201ENST00000302190 NANOS3P60323 173 aaKnown RBP12.74□□□□□ -0.37
SDC2-201ENST00000302190 ZNF169Q14929 603 aaPredicted RBP12.74□□□□□ -0.37
SDC2-201ENST00000302190 C19orf48Q6RUI8 117 aa12.74□□□□□ -0.37
SDC2-201ENST00000302190 TMEM92Q6UXU6 159 aa12.74□□□□□ -0.37
SDC2-201ENST00000302190 SLC16A9Q7RTY1 509 aa12.74□□□□□ -0.37
SDC2-201ENST00000302190 OVCH1Q7RTY7 1134 aa12.74□□□□□ -0.37
SDC2-201ENST00000302190 TMEM17Q86X19 198 aa12.74□□□□□ -0.37
SDC2-201ENST00000302190 ZNF595Q8IYB9 648 aa12.74□□□□□ -0.37
SDC2-201ENST00000302190 GTPBP8Q8N3Z3 284 aaPredicted RBP12.74□□□□□ -0.37
SDC2-201ENST00000302190 ARIH2OSQ8N7S6 290 aa12.74□□□□□ -0.37
SDC2-201ENST00000302190 ZNF321PQ8N8H1 164 aa12.74□□□□□ -0.37
SDC2-201ENST00000302190 MAFIPQ8WZ33 124 aa12.74□□□□□ -0.37
SDC2-201ENST00000302190 PPP4R1LQ9P1A2 415 aa12.74□□□□□ -0.37
SDC2-201ENST00000302190 SHPKQ9UHJ6 478 aa12.74□□□□□ -0.37
SDC2-201ENST00000302190 RBM7Q9Y580 266 aaKnown RBP12.74□□□□□ -0.37
SDC2-201ENST00000302190 EFCAB7A8K855 629 aa12.74□□□□□ -0.37
SDC2-201ENST00000302190 PTP4A3O75365 173 aa12.74□□□□□ -0.37
SDC2-201ENST00000302190 FBXO24O75426 580 aa12.74□□□□□ -0.37
SDC2-201ENST00000302190 CFIP05156 583 aa12.74□□□□□ -0.37
SDC2-201ENST00000302190 SEC61A1P61619 476 aaKnown RBP12.74□□□□□ -0.37
SDC2-201ENST00000302190 BDH1Q02338 343 aa12.74□□□□□ -0.37
SDC2-201ENST00000302190 TOMM34Q15785 309 aaPredicted RBP12.74□□□□□ -0.37
SDC2-201ENST00000302190 ZNF704Q6ZNC4 412 aaPredicted RBP12.74□□□□□ -0.37
SDC2-201ENST00000302190 MS4A3Q96HJ5 214 aa12.74□□□□□ -0.37
SDC2-201ENST00000302190 SLC41A2Q96JW4 573 aa12.74□□□□□ -0.37
SDC2-201ENST00000302190 GAS2L1Q99501 681 aaPredicted RBP12.74□□□□□ -0.37
SDC2-201ENST00000302190 TINAGL1Q9GZM7 467 aaPredicted RBP12.74□□□□□ -0.37
SDC2-201ENST00000302190 PARPBPQ9NWS1 579 aa12.74□□□□□ -0.37
SDC2-201ENST00000302190 ZMIZ1Q9ULJ6 1067 aa12.74□□□□□ -0.37
SDC2-201ENST00000302190 TRAV8-7A0A075B6U6 113 aa12.73□□□□□ -0.37
SDC2-201ENST00000302190 VSTM2BA6NLU5 285 aa12.73□□□□□ -0.37
SDC2-201ENST00000302190 F8W036 122 aa12.73□□□□□ -0.37
SDC2-201ENST00000302190 SEC14L5O43304 696 aa12.73□□□□□ -0.37
SDC2-201ENST00000302190 SRPX2O60687 465 aaPredicted RBP12.73□□□□□ -0.37
SDC2-201ENST00000302190 NGFRP08138 427 aa12.73□□□□□ -0.37
SDC2-201ENST00000302190 PLA1AQ53H76 456 aa12.73□□□□□ -0.37
SDC2-201ENST00000302190 TMUB2Q71RG4 321 aa12.73□□□□□ -0.37
SDC2-201ENST00000302190 TRAPPC6BQ86SZ2 158 aa12.73□□□□□ -0.37
SDC2-201ENST00000302190 RASGRP3Q8IV61 690 aa12.73□□□□□ -0.37
SDC2-201ENST00000302190 OR5T2Q8NGG2 359 aa12.73□□□□□ -0.37
SDC2-201ENST00000302190 HRH4Q9H3N8 390 aa12.73□□□□□ -0.37
SDC2-201ENST00000302190 MBD2Q9UBB5 411 aa12.73□□□□□ -0.37
SDC2-201ENST00000302190 STEAP1Q9UHE8 339 aa12.73□□□□□ -0.37
SDC2-201ENST00000302190 KIF26BQ2KJY2 2108 aa12.73□□□□□ -0.37
SDC2-201ENST00000302190 TMED7-TICAM2A0A0A6YYA0 188 aa12.73□□□□□ -0.37
SDC2-201ENST00000302190 CCDC163A0A0D9SF12 145 aa12.73□□□□□ -0.37
SDC2-201ENST00000302190 DCTN6O00399 190 aa12.73□□□□□ -0.37
SDC2-201ENST00000302190 ZNF208O43345 1280 aa12.73□□□□□ -0.37
SDC2-201ENST00000302190 PMP2P02689 132 aa12.73□□□□□ -0.37
SDC2-201ENST00000302190 CSTBP04080 98 aaKnown RBP12.73□□□□□ -0.37
SDC2-201ENST00000302190 PTBP1P26599 531 aaKnown RBP eCLIP12.73□□□□□ -0.375e-7■■□□□ 11.7
SDC2-201ENST00000302190 OR1D5P58170 312 aa12.73□□□□□ -0.37
SDC2-201ENST00000302190 FLI1Q01543 452 aaPredicted RBP12.73□□□□□ -0.37
SDC2-201ENST00000302190 FMODQ06828 376 aa12.73□□□□□ -0.37
SDC2-201ENST00000302190 BAMBIQ13145 260 aa12.73□□□□□ -0.37
SDC2-201ENST00000302190 SPAG16Q8N0X2 631 aa12.73□□□□□ -0.37
SDC2-201ENST00000302190 TMEM234Q8WY98 164 aa12.73□□□□□ -0.37
SDC2-201ENST00000302190 SERINC1Q9NRX5 453 aa12.73□□□□□ -0.37
SDC2-201ENST00000302190 B9D1Q9UPM9 204 aa12.73□□□□□ -0.37
SDC2-201ENST00000302190 TMED7Q9Y3B3 224 aa12.73□□□□□ -0.37
SDC2-201ENST00000302190 HELZP42694 1942 aaKnown RBP12.73□□□□□ -0.37
SDC2-201ENST00000302190 TMEM212A6NML5 194 aa12.73□□□□□ -0.37
SDC2-201ENST00000302190 IGKV1D-16P01601 117 aa12.73□□□□□ -0.37
SDC2-201ENST00000302190 CALCBP10092 127 aa12.73□□□□□ -0.37
SDC2-201ENST00000302190 IFNGR1P15260 489 aa12.73□□□□□ -0.37
SDC2-201ENST00000302190 POU3F2P20265 443 aaPredicted RBP12.73□□□□□ -0.37
SDC2-201ENST00000302190 SDHAP31040 664 aa12.73□□□□□ -0.37
SDC2-201ENST00000302190 BLOC1S1P78537 153 aa12.73□□□□□ -0.37
SDC2-201ENST00000302190 MC2RQ01718 297 aa12.73□□□□□ -0.37
SDC2-201ENST00000302190 OR52W1Q6IF63 320 aa12.73□□□□□ -0.37
SDC2-201ENST00000302190 TMEM88Q6PEY1 159 aa12.73□□□□□ -0.37
SDC2-201ENST00000302190 SYS1Q8N2H4 156 aa12.73□□□□□ -0.37
SDC2-201ENST00000302190 TMEM156Q8N614 296 aa12.73□□□□□ -0.37
SDC2-201ENST00000302190 OR52H1Q8NGJ2 320 aa12.73□□□□□ -0.37
SDC2-201ENST00000302190 LCORQ96JN0 433 aaPredicted RBP12.73□□□□□ -0.37
SDC2-201ENST00000302190 C10orf90Q96M02 699 aa12.73□□□□□ -0.37
SDC2-201ENST00000302190 RBM24Q9BX46 236 aaKnown RBP12.73□□□□□ -0.37
SDC2-201ENST00000302190 CA10Q9NS85 328 aa12.73□□□□□ -0.37
SDC2-201ENST00000302190 ICE1Q9Y2F5 2266 aa12.72□□□□□ -0.37
SDC2-201ENST00000302190 A0A087WUJ7 227 aa12.72□□□□□ -0.37
SDC2-201ENST00000302190 OIP5O43482 229 aa12.72□□□□□ -0.37
SDC2-201ENST00000302190 EMP2P54851 167 aa12.72□□□□□ -0.37
SDC2-201ENST00000302190 FXYD4P59646 89 aa12.72□□□□□ -0.37
SDC2-201ENST00000302190 SLC36A2Q495M3 483 aa12.72□□□□□ -0.37
SDC2-201ENST00000302190 PNLDC1Q8NA58 520 aaKnown RBP12.72□□□□□ -0.37
SDC2-201ENST00000302190 SMRP1Q8NCR6 262 aa12.72□□□□□ -0.37
SDC2-201ENST00000302190 TMEM231Q9H6L2 316 aa12.72□□□□□ -0.37
SDC2-201ENST00000302190 LMAN1LQ9HAT1 526 aa12.72□□□□□ -0.37
SDC2-201ENST00000302190 M0R036 132 aa12.72□□□□□ -0.37
SDC2-201ENST00000302190 IL9P15248 144 aa12.72□□□□□ -0.37
SDC2-201ENST00000302190 S100A12P80511 92 aa12.72□□□□□ -0.37
SDC2-201ENST00000302190 OR14A16Q8NHC5 309 aa12.72□□□□□ -0.37
SDC2-201ENST00000302190 SLC2A12Q8TD20 617 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms