RNA–Protein interactions for RNA: ENST00000301843.12

CTTN-201, Transcript of cortactin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTTN, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-201ENST00000301843 SEMA6CQ9H3T2 930 aa12.19□□□□□ -0.46
CTTN-201ENST00000301843 MRPL22Q9NWU5 206 aaKnown RBP12.19□□□□□ -0.46
CTTN-201ENST00000301843 DHDHQ9UQ10 334 aa12.19□□□□□ -0.46
CTTN-201ENST00000301843 TMEM212A6NML5 194 aa12.19□□□□□ -0.46
CTTN-201ENST00000301843 MPGP29372 298 aa12.19□□□□□ -0.46
CTTN-201ENST00000301843 DHRS2Q13268 280 aa12.19□□□□□ -0.46
CTTN-201ENST00000301843 ATPAF1Q5TC12 328 aaPredicted RBP12.19□□□□□ -0.46
CTTN-201ENST00000301843 FAM122CQ6P4D5 195 aa12.19□□□□□ -0.46
CTTN-201ENST00000301843 TMEM184AQ6ZMB5 413 aa12.19□□□□□ -0.46
CTTN-201ENST00000301843 BPIFB2Q8N4F0 458 aa12.19□□□□□ -0.46
CTTN-201ENST00000301843 TMEM185AQ8NFB2 350 aa12.19□□□□□ -0.46
CTTN-201ENST00000301843 PXT1Q8NFP0 134 aa12.19□□□□□ -0.46
CTTN-201ENST00000301843 BPIFCQ8NFQ6 507 aa12.19□□□□□ -0.46
CTTN-201ENST00000301843 OTOSQ8NHW6 89 aa12.19□□□□□ -0.46
CTTN-201ENST00000301843 THAP3Q8WTV1 239 aaPredicted RBP12.19□□□□□ -0.46
CTTN-201ENST00000301843 PHYHIPQ92561 330 aa12.19□□□□□ -0.46
CTTN-201ENST00000301843 MCHR2Q969V1 340 aa12.19□□□□□ -0.46
CTTN-201ENST00000301843 CMTM3Q96MX0 182 aa12.19□□□□□ -0.46
CTTN-201ENST00000301843 TGM7Q96PF1 710 aa12.19□□□□□ -0.46
CTTN-201ENST00000301843 CDCA3Q99618 268 aaPredicted RBP12.19□□□□□ -0.46
CTTN-201ENST00000301843 FBRSQ9HAH7 460 aa12.19□□□□□ -0.46
CTTN-201ENST00000301843 CENPMQ9NSP4 180 aa12.19□□□□□ -0.46
CTTN-201ENST00000301843 OR5H14A6NHG9 310 aa12.19□□□□□ -0.46
CTTN-201ENST00000301843 CLDN4O14493 209 aa12.19□□□□□ -0.46
CTTN-201ENST00000301843 PRKACAP17612 351 aa12.19□□□□□ -0.46
CTTN-201ENST00000301843 CXCR1P25024 350 aa12.19□□□□□ -0.46
CTTN-201ENST00000301843 MRPS10P82664 201 aaKnown RBP12.19□□□□□ -0.46
CTTN-201ENST00000301843 DLX2Q07687 328 aaPredicted RBP12.19□□□□□ -0.46
CTTN-201ENST00000301843 EIF2B1Q14232 305 aaKnown RBP12.19□□□□□ -0.46
CTTN-201ENST00000301843 CDNFQ49AH0 187 aa12.19□□□□□ -0.46
CTTN-201ENST00000301843 TMEM225Q6GV28 225 aa12.19□□□□□ -0.46
CTTN-201ENST00000301843 EID2Q8N6I1 236 aa12.19□□□□□ -0.46
CTTN-201ENST00000301843 VRK1Q99986 396 aaPredicted RBP12.19□□□□□ -0.46
CTTN-201ENST00000301843 TMPRSS13Q9BYE2 586 aa12.19□□□□□ -0.46
CTTN-201ENST00000301843 TMEM231Q9H6L2 316 aa12.19□□□□□ -0.46
CTTN-201ENST00000301843 KLK13Q9UKR3 277 aa12.19□□□□□ -0.46
CTTN-201ENST00000301843 TMED7Q9Y3B3 224 aa12.19□□□□□ -0.46
CTTN-201ENST00000301843 LOC100289279A0A1B0GTE1 492 aa12.18□□□□□ -0.46
CTTN-201ENST00000301843 DCNP07585 359 aaKnown RBP12.18□□□□□ -0.46
CTTN-201ENST00000301843 AKR1C4P17516 323 aa12.18□□□□□ -0.46
CTTN-201ENST00000301843 INSM1Q01101 510 aaPredicted RBP12.18□□□□□ -0.46
CTTN-201ENST00000301843 EEF1A1P5Q5VTE0 462 aa12.18□□□□□ -0.46
CTTN-201ENST00000301843 TMPPEQ6ZT21 453 aa12.18□□□□□ -0.46
CTTN-201ENST00000301843 ROBO4Q8WZ75 1007 aa12.18□□□□□ -0.46
CTTN-201ENST00000301843 UBQLN4Q9NRR5 601 aa12.18□□□□□ -0.46
CTTN-201ENST00000301843 COA3Q9Y2R0 106 aaPredicted RBP12.18□□□□□ -0.46
CTTN-201ENST00000301843 C13orf42A0A1B0GVH6 325 aa12.18□□□□□ -0.46
CTTN-201ENST00000301843 OR6C65A6NJZ3 312 aa12.18□□□□□ -0.46
CTTN-201ENST00000301843 KRBOX1C9JBD0 128 aa12.18□□□□□ -0.46
CTTN-201ENST00000301843 GPR31O00270 319 aa12.18□□□□□ -0.46
CTTN-201ENST00000301843 HPP00738 406 aa12.18□□□□□ -0.46
CTTN-201ENST00000301843 CSF2RBP32927 897 aa12.18□□□□□ -0.46
CTTN-201ENST00000301843 NR0B1P51843 470 aaKnown RBP12.18□□□□□ -0.46
CTTN-201ENST00000301843 UBE2IP63279 158 aaKnown RBP12.18□□□□□ -0.46
CTTN-201ENST00000301843 MC2RQ01718 297 aa12.18□□□□□ -0.46
CTTN-201ENST00000301843 SLC17A1Q14916 467 aa12.18□□□□□ -0.46
CTTN-201ENST00000301843 UBXN2BQ14CS0 331 aa12.18□□□□□ -0.46
CTTN-201ENST00000301843 TFAP2EQ6VUC0 442 aa12.18□□□□□ -0.46
CTTN-201ENST00000301843 TTLL10Q6ZVT0 673 aa12.18□□□□□ -0.46
CTTN-201ENST00000301843 OVCH2Q7RTZ1 564 aa12.18□□□□□ -0.46
CTTN-201ENST00000301843 HDDC2Q7Z4H3 204 aa12.18□□□□□ -0.46
CTTN-201ENST00000301843 IQCF2Q8IXL9 164 aa12.18□□□□□ -0.46
CTTN-201ENST00000301843 CYP8B1Q9UNU6 501 aa12.18□□□□□ -0.46
CTTN-201ENST00000301843 MRPS33Q9Y291 106 aaKnown RBP12.18□□□□□ -0.46
CTTN-201ENST00000301843 HMSDA8MTL9 139 aa12.17□□□□□ -0.46
CTTN-201ENST00000301843 P2RY10O00398 339 aa12.17□□□□□ -0.46
CTTN-201ENST00000301843 TNFP01375 233 aa12.17□□□□□ -0.46
CTTN-201ENST00000301843 CLPSP04118 112 aa12.17□□□□□ -0.46
CTTN-201ENST00000301843 CD1AP06126 327 aa12.17□□□□□ -0.46
CTTN-201ENST00000301843 PI3P19957 117 aa12.17□□□□□ -0.46
CTTN-201ENST00000301843 HTR2CP28335 458 aa12.17□□□□□ -0.46
CTTN-201ENST00000301843 SLC25A1P53007 311 aa12.17□□□□□ -0.46
CTTN-201ENST00000301843 CXADRP78310 365 aa12.17□□□□□ -0.46
CTTN-201ENST00000301843 OR4D6Q8NGJ1 314 aa12.17□□□□□ -0.46
CTTN-201ENST00000301843 PPP1R1CQ8WVI7 109 aa12.17□□□□□ -0.46
CTTN-201ENST00000301843 ASB5Q8WWX0 329 aa12.17□□□□□ -0.46
CTTN-201ENST00000301843 DPYSL5Q9BPU6 564 aa12.17□□□□□ -0.46
CTTN-201ENST00000301843 UTP23Q9BRU9 249 aaKnown RBP12.17□□□□□ -0.46
CTTN-201ENST00000301843 VSIG4Q9Y279 399 aa12.17□□□□□ -0.46
CTTN-201ENST00000301843 LRP12Q9Y561 859 aa12.17□□□□□ -0.46
CTTN-201ENST00000301843 WDFY4Q6ZS81 3184 aa12.17□□□□□ -0.46
CTTN-201ENST00000301843 FRYQ5TBA9 3013 aa12.17□□□□□ -0.46
CTTN-201ENST00000301843 SHISA8B8ZZ34 492 aa12.17□□□□□ -0.46
CTTN-201ENST00000301843 SRPX2O60687 465 aaPredicted RBP12.17□□□□□ -0.46
CTTN-201ENST00000301843 CYB5AP00167 134 aa12.17□□□□□ -0.46
CTTN-201ENST00000301843 CD34P28906 385 aa12.17□□□□□ -0.46
CTTN-201ENST00000301843 CTHP32929 405 aa12.17□□□□□ -0.46
CTTN-201ENST00000301843 EIF2B5Q13144 721 aaKnown RBP12.17□□□□□ -0.46
CTTN-201ENST00000301843 HOXB13Q92826 284 aaPredicted RBP12.17□□□□□ -0.46
CTTN-201ENST00000301843 ABHD6Q9BV23 337 aa12.17□□□□□ -0.46
CTTN-201ENST00000301843 IFT46Q9NQC8 304 aa12.17□□□□□ -0.46
CTTN-201ENST00000301843 ZNF275Q9NSD4 429 aaPredicted RBP12.17□□□□□ -0.46
CTTN-201ENST00000301843 ASF1BQ9NVP2 202 aa12.17□□□□□ -0.46
CTTN-201ENST00000301843 ABCA7Q8IZY2 2146 aa12.17□□□□□ -0.46
CTTN-201ENST00000301843 ZNF736B4DX44 427 aaPredicted RBP12.17□□□□□ -0.46
CTTN-201ENST00000301843 SLC17A2O00624 439 aa12.17□□□□□ -0.46
CTTN-201ENST00000301843 LDOC1O95751 146 aaPredicted RBP12.17□□□□□ -0.46
CTTN-201ENST00000301843 GLULP15104 373 aa12.17□□□□□ -0.46
CTTN-201ENST00000301843 GNALP38405 381 aa12.17□□□□□ -0.46
CTTN-201ENST00000301843 ARRB1P49407 418 aaPredicted RBP12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms