RNA–Protein interactions for RNA: ENST00000296254.3

TMEM41A-201, Transcript of transmembrane protein 41A, humanhuman

TSL 2 BASIC

Gene TMEM41A, Length 1,060 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM41A-201ENST00000296254 TMEM239Q8WW34 195 aa13.49□□□□□ -0.25
TMEM41A-201ENST00000296254 STON2Q8WXE9 905 aa13.49□□□□□ -0.25
TMEM41A-201ENST00000296254 C1orf147Q96MC9 270 aaPredicted RBP13.49□□□□□ -0.25
TMEM41A-201ENST00000296254 POLR2J2Q9GZM3 115 aaKnown RBP13.49□□□□□ -0.25
TMEM41A-201ENST00000296254 POLR2J3Q9H1A7 115 aaKnown RBP13.49□□□□□ -0.25
TMEM41A-201ENST00000296254 TXNIPQ9H3M7 391 aa13.49□□□□□ -0.25
TMEM41A-201ENST00000296254 MSL2Q9HCI7 577 aa13.49□□□□□ -0.25
TMEM41A-201ENST00000296254 TMEM106BQ9NUM4 274 aa13.49□□□□□ -0.25
TMEM41A-201ENST00000296254 KLHL21Q9UJP4 597 aa13.49□□□□□ -0.25
TMEM41A-201ENST00000296254 NUP50Q9UKX7 468 aa13.49□□□□□ -0.25
TMEM41A-201ENST00000296254 POLR3KQ9Y2Y1 108 aaPredicted RBP13.49□□□□□ -0.25
TMEM41A-201ENST00000296254 SH3GLB1Q9Y371 365 aa13.49□□□□□ -0.25
TMEM41A-201ENST00000296254 A8MXK9 166 aa13.48□□□□□ -0.25
TMEM41A-201ENST00000296254 NGFP01138 241 aa13.48□□□□□ -0.25
TMEM41A-201ENST00000296254 CST2P09228 141 aa13.48□□□□□ -0.25
TMEM41A-201ENST00000296254 TNFRSF1BP20333 461 aa13.48□□□□□ -0.25
TMEM41A-201ENST00000296254 LAP3P28838 519 aa13.48□□□□□ -0.25
TMEM41A-201ENST00000296254 GZMMP51124 257 aa13.48□□□□□ -0.25
TMEM41A-201ENST00000296254 TNFAIP6P98066 277 aaPredicted RBP13.48□□□□□ -0.25
TMEM41A-201ENST00000296254 ZNF154Q13106 437 aa13.48□□□□□ -0.25
TMEM41A-201ENST00000296254 TOP3AQ13472 1001 aaPredicted RBP13.48□□□□□ -0.25
TMEM41A-201ENST00000296254 TAF11Q15544 211 aa13.48□□□□□ -0.25
TMEM41A-201ENST00000296254 KLF17Q5JT82 389 aaPredicted RBP13.48□□□□□ -0.25
TMEM41A-201ENST00000296254 FOXL2NBQ6ZUU3 175 aa13.48□□□□□ -0.25
TMEM41A-201ENST00000296254 ALDH16A1Q8IZ83 802 aa13.48□□□□□ -0.25
TMEM41A-201ENST00000296254 CLDN22Q8N7P3 220 aa13.48□□□□□ -0.25
TMEM41A-201ENST00000296254 DUX5Q96PT3 197 aa13.48□□□□□ -0.25
TMEM41A-201ENST00000296254 ALG12Q9BV10 488 aa13.48□□□□□ -0.25
TMEM41A-201ENST00000296254 PLEK2Q9NYT0 353 aa13.48□□□□□ -0.25
TMEM41A-201ENST00000296254 ZNF69Q9UC07 566 aa13.48□□□□□ -0.25
TMEM41A-201ENST00000296254 HIF3AQ9Y2N7 669 aa13.48□□□□□ -0.25
TMEM41A-201ENST00000296254 TRAPPC2LH3BP13 241 aa13.47□□□□□ -0.25
TMEM41A-201ENST00000296254 TIMM8AO60220 97 aaPredicted RBP13.47□□□□□ -0.25
TMEM41A-201ENST00000296254 ZNF12P17014 697 aa13.47□□□□□ -0.25
TMEM41A-201ENST00000296254 ARHGDIAP52565 204 aa13.47□□□□□ -0.25
TMEM41A-201ENST00000296254 PIN1Q13526 163 aaPredicted RBP13.47□□□□□ -0.25
TMEM41A-201ENST00000296254 TMEM155Q4W5P6 130 aa13.47□□□□□ -0.25
TMEM41A-201ENST00000296254 ALG10Q5BKT4 473 aa13.47□□□□□ -0.25
TMEM41A-201ENST00000296254 ZNF774Q6NX45 483 aa13.47□□□□□ -0.25
TMEM41A-201ENST00000296254 ZER1Q7Z7L7 766 aa13.47□□□□□ -0.25
TMEM41A-201ENST00000296254 KLHL36Q8N4N3 616 aa13.47□□□□□ -0.25
TMEM41A-201ENST00000296254 ZNF283Q8N7M2 679 aa13.47□□□□□ -0.25
TMEM41A-201ENST00000296254 FNDC8Q8TC99 324 aa13.47□□□□□ -0.25
TMEM41A-201ENST00000296254 TSPEARQ8WU66 669 aa13.47□□□□□ -0.25
TMEM41A-201ENST00000296254 C4orf45Q96LM5 186 aa13.47□□□□□ -0.25
TMEM41A-201ENST00000296254 C1QTNF5Q9BXJ0 243 aa13.47□□□□□ -0.25
TMEM41A-201ENST00000296254 ELOVL3Q9HB03 270 aa13.47□□□□□ -0.25
TMEM41A-201ENST00000296254 PATZ1Q9HBE1 687 aaKnown RBP13.47□□□□□ -0.25
TMEM41A-201ENST00000296254 RIMS3Q9UJD0 308 aa13.47□□□□□ -0.25
TMEM41A-201ENST00000296254 BAG5Q9UL15 447 aa13.47□□□□□ -0.25
TMEM41A-201ENST00000296254 MED31Q9Y3C7 131 aa13.47□□□□□ -0.25
TMEM41A-201ENST00000296254 TIMM10BQ9Y5J6 103 aa13.47□□□□□ -0.25
TMEM41A-201ENST00000296254 AUP1Q9Y679 476 aa13.47□□□□□ -0.25
TMEM41A-201ENST00000296254 PRKDCP78527 4128 aaKnown RBP13.46□□□□□ -0.25
TMEM41A-201ENST00000296254 F5H0A9 414 aaPredicted RBP13.46□□□□□ -0.25
TMEM41A-201ENST00000296254 SHOX2O60902 331 aaPredicted RBP13.46□□□□□ -0.25
TMEM41A-201ENST00000296254 RNASE1P07998 156 aaKnown RBP13.46□□□□□ -0.25
TMEM41A-201ENST00000296254 SBK2P0C263 348 aa13.46□□□□□ -0.25
TMEM41A-201ENST00000296254 THRBP10828 461 aa13.46□□□□□ -0.25
TMEM41A-201ENST00000296254 RBMXP38159 391 aaKnown RBP13.46□□□□□ -0.25
TMEM41A-201ENST00000296254 SLC6A9P48067 706 aa13.46□□□□□ -0.25
TMEM41A-201ENST00000296254 PCBD1P61457 104 aa13.46□□□□□ -0.25
TMEM41A-201ENST00000296254 SEC61A1P61619 476 aaKnown RBP13.46□□□□□ -0.25
TMEM41A-201ENST00000296254 BTG1P62324 171 aa13.46□□□□□ -0.25
TMEM41A-201ENST00000296254 PSG7Q13046 419 aa13.46□□□□□ -0.25
TMEM41A-201ENST00000296254 CDK5R2Q13319 367 aa13.46□□□□□ -0.25
TMEM41A-201ENST00000296254 ENDOGQ14249 297 aaKnown RBP13.46□□□□□ -0.25
TMEM41A-201ENST00000296254 LAPTM4AQ15012 233 aa13.46□□□□□ -0.25
TMEM41A-201ENST00000296254 ZMYND11Q15326 602 aa13.46□□□□□ -0.25
TMEM41A-201ENST00000296254 BEND6Q5SZJ8 279 aaPredicted RBP13.46□□□□□ -0.25
TMEM41A-201ENST00000296254 AGBL2Q5U5Z8 902 aa13.46□□□□□ -0.25
TMEM41A-201ENST00000296254 NPEPL1Q8NDH3 523 aa13.46□□□□□ -0.25
TMEM41A-201ENST00000296254 ZNF48Q96MX3 618 aaPredicted RBP13.46□□□□□ -0.25
TMEM41A-201ENST00000296254 SIGLEC11Q96RL6 698 aa13.46□□□□□ -0.25
TMEM41A-201ENST00000296254 DCLRE1CQ96SD1 692 aaKnown RBP13.46□□□□□ -0.25
TMEM41A-201ENST00000296254 GPA33Q99795 319 aa13.46□□□□□ -0.25
TMEM41A-201ENST00000296254 NDRG4Q9ULP0 352 aaKnown RBP13.46□□□□□ -0.25
TMEM41A-201ENST00000296254 INSIG2Q9Y5U4 225 aa13.46□□□□□ -0.25
TMEM41A-201ENST00000296254 CLDN34H7C241 214 aa13.45□□□□□ -0.26
TMEM41A-201ENST00000296254 PIP5K1CO60331 668 aa13.45□□□□□ -0.26
TMEM41A-201ENST00000296254 ABHD16AO95870 558 aa13.45□□□□□ -0.26
TMEM41A-201ENST00000296254 GSTM3P21266 225 aa13.45□□□□□ -0.26
TMEM41A-201ENST00000296254 MSR1P21757 451 aa13.45□□□□□ -0.26
TMEM41A-201ENST00000296254 TNFSF4P23510 183 aa13.45□□□□□ -0.26
TMEM41A-201ENST00000296254 RPL27P61353 136 aaKnown RBP13.45□□□□□ -0.26
TMEM41A-201ENST00000296254 FAM205BPQ63HN1 556 aa13.45□□□□□ -0.26
TMEM41A-201ENST00000296254 ARL9Q6T311 187 aa13.45□□□□□ -0.26
TMEM41A-201ENST00000296254 SYT9Q86SS6 491 aa13.45□□□□□ -0.26
TMEM41A-201ENST00000296254 BCL6BQ8N143 479 aaPredicted RBP13.45□□□□□ -0.26
TMEM41A-201ENST00000296254 THOC1Q96FV9 657 aaKnown RBP13.45□□□□□ -0.26
TMEM41A-201ENST00000296254 SAMD8Q96LT4 415 aa13.45□□□□□ -0.26
TMEM41A-201ENST00000296254 RBP7Q96R05 134 aa13.45□□□□□ -0.26
TMEM41A-201ENST00000296254 MRI1Q9BV20 369 aa13.45□□□□□ -0.26
TMEM41A-201ENST00000296254 UNKLQ9H9P5 680 aaKnown RBP13.45□□□□□ -0.26
TMEM41A-201ENST00000296254 EGFL7Q9UHF1 273 aa13.45□□□□□ -0.26
TMEM41A-201ENST00000296254 TGP01266 2768 aa13.45□□□□□ -0.26
TMEM41A-201ENST00000296254 A0A1W2PPL8 197 aa13.44□□□□□ -0.26
TMEM41A-201ENST00000296254 C12orf71A8MTZ7 269 aa13.44□□□□□ -0.26
TMEM41A-201ENST00000296254 TNFRSF1AP19438 455 aa13.44□□□□□ -0.26
TMEM41A-201ENST00000296254 OR1E2P47887 323 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms