RNA–Protein interactions for RNA: ENST00000288840.9

SMAD6-201, Transcript of SMAD family member 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD6, Length 3,835 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-201ENST00000288840 HAO2Q9NYQ3 351 aa14.36□□□□□ -0.11
SMAD6-201ENST00000288840 PCDHGA5Q9Y5G8 931 aa14.36□□□□□ -0.11
SMAD6-201ENST00000288840 OR14I1A6ND48 311 aa14.35□□□□□ -0.11
SMAD6-201ENST00000288840 CRTAPO75718 401 aaPredicted RBP14.35□□□□□ -0.11
SMAD6-201ENST00000288840 PUDPQ08623 228 aa14.35□□□□□ -0.11
SMAD6-201ENST00000288840 SLC17A1Q14916 467 aa14.35□□□□□ -0.11
SMAD6-201ENST00000288840 SLC9A3R2Q15599 337 aa14.35□□□□□ -0.11
SMAD6-201ENST00000288840 LPAL2Q16609 132 aa14.35□□□□□ -0.11
SMAD6-201ENST00000288840 TMEM176BQ3YBM2 270 aaPredicted RBP14.35□□□□□ -0.11
SMAD6-201ENST00000288840 TRAPPC6BQ86SZ2 158 aa14.35□□□□□ -0.11
SMAD6-201ENST00000288840 BATF2Q8N1L9 274 aa14.35□□□□□ -0.11
SMAD6-201ENST00000288840 OR6C1Q96RD1 312 aa14.35□□□□□ -0.11
SMAD6-201ENST00000288840 RBM24Q9BX46 236 aaKnown RBP14.35□□□□□ -0.11
SMAD6-201ENST00000288840 ELF5Q9UKW6 265 aaPredicted RBP14.35□□□□□ -0.11
SMAD6-201ENST00000288840 EP300Q09472 2414 aaPredicted RBP14.35□□□□□ -0.11
SMAD6-201ENST00000288840 SIGLEC5O15389 551 aa14.35□□□□□ -0.11
SMAD6-201ENST00000288840 GALP22466 123 aa14.35□□□□□ -0.11
SMAD6-201ENST00000288840 CCNOP22674 350 aa14.35□□□□□ -0.11
SMAD6-201ENST00000288840 CDAP32320 146 aa14.35□□□□□ -0.11
SMAD6-201ENST00000288840 POLR2HP52434 150 aaKnown RBP14.35□□□□□ -0.11
SMAD6-201ENST00000288840 SNU13P55769 128 aaKnown RBP14.35□□□□□ -0.11
SMAD6-201ENST00000288840 PRSS12P56730 875 aa14.35□□□□□ -0.11
SMAD6-201ENST00000288840 SIGLEC14Q08ET2 396 aa14.35□□□□□ -0.11
SMAD6-201ENST00000288840 ELAVL1Q15717 326 aaKnown RBP14.35□□□□□ -0.11
SMAD6-201ENST00000288840 PAPD4Q6PIY7 484 aaKnown RBP14.35□□□□□ -0.11
SMAD6-201ENST00000288840 FLVCR1-AS1Q8TAF5 88 aa14.35□□□□□ -0.11
SMAD6-201ENST00000288840 PTPMT1Q8WUK0 201 aaPredicted RBP14.35□□□□□ -0.11
SMAD6-201ENST00000288840 MAFIPQ8WZ33 124 aa14.35□□□□□ -0.11
SMAD6-201ENST00000288840 CTHRC1Q96CG8 243 aa14.35□□□□□ -0.11
SMAD6-201ENST00000288840 SLC25A38Q96DW6 304 aa14.35□□□□□ -0.11
SMAD6-201ENST00000288840 MESP1Q9BRJ9 268 aa14.35□□□□□ -0.11
SMAD6-201ENST00000288840 OR52A1Q9UKL2 312 aa14.35□□□□□ -0.11
SMAD6-201ENST00000288840 CACNA1GO43497 2377 aa14.35□□□□□ -0.11
SMAD6-201ENST00000288840 VCANP13611 3396 aa14.35□□□□□ -0.11
SMAD6-201ENST00000288840 A8MVM7 634 aa14.35□□□□□ -0.11
SMAD6-201ENST00000288840 LEUTXA8MZ59 168 aa14.35□□□□□ -0.11
SMAD6-201ENST00000288840 ZNF217O75362 1048 aa14.35□□□□□ -0.11
SMAD6-201ENST00000288840 GLI4P10075 376 aa14.35□□□□□ -0.11
SMAD6-201ENST00000288840 POU3F2P20265 443 aaPredicted RBP14.35□□□□□ -0.11
SMAD6-201ENST00000288840 ALOX5APP20292 161 aa14.35□□□□□ -0.11
SMAD6-201ENST00000288840 KLF9Q13886 244 aaPredicted RBP14.35□□□□□ -0.11
SMAD6-201ENST00000288840 RAET1LQ5VY80 246 aa14.35□□□□□ -0.11
SMAD6-201ENST00000288840 ZNF679Q8IYX0 411 aa14.35□□□□□ -0.11
SMAD6-201ENST00000288840 OR11G2Q8NGC1 345 aa14.35□□□□□ -0.11
SMAD6-201ENST00000288840 STT3BQ8TCJ2 826 aa14.35□□□□□ -0.11
SMAD6-201ENST00000288840 ZBTB8AQ96BR9 441 aa14.35□□□□□ -0.11
SMAD6-201ENST00000288840 PCDHGA9Q9Y5G4 932 aaKnown RBP14.35□□□□□ -0.11
SMAD6-201ENST00000288840 LOC100289279A0A1B0GTE1 492 aa14.34□□□□□ -0.11
SMAD6-201ENST00000288840 A6NCN8 305 aa14.34□□□□□ -0.11
SMAD6-201ENST00000288840 TPOP07202 933 aa14.34□□□□□ -0.11
SMAD6-201ENST00000288840 ZNF43P17038 809 aa14.34□□□□□ -0.11
SMAD6-201ENST00000288840 ADRA2CP18825 462 aa14.34□□□□□ -0.11
SMAD6-201ENST00000288840 S100A11P31949 105 aa14.34□□□□□ -0.11
SMAD6-201ENST00000288840 GSG1LQ6UXU4 331 aa14.34□□□□□ -0.11
SMAD6-201ENST00000288840 ATG4DQ86TL0 474 aaPredicted RBP14.34□□□□□ -0.11
SMAD6-201ENST00000288840 CPNE2Q96FN4 548 aaPredicted RBP14.34□□□□□ -0.11
SMAD6-201ENST00000288840 ACKR4Q9NPB9 350 aa14.34□□□□□ -0.11
SMAD6-201ENST00000288840 KLHL13Q9P2N7 655 aa14.34□□□□□ -0.11
SMAD6-201ENST00000288840 GPN3Q9UHW5 284 aaPredicted RBP14.34□□□□□ -0.11
SMAD6-201ENST00000288840 TRIOO75962 3097 aa14.34□□□□□ -0.11
SMAD6-201ENST00000288840 MEIKINA0A087WXM9 373 aa14.34□□□□□ -0.11
SMAD6-201ENST00000288840 PMP2P02689 132 aa14.34□□□□□ -0.11
SMAD6-201ENST00000288840 IL11P20809 199 aa14.34□□□□□ -0.11
SMAD6-201ENST00000288840 CCINQ13939 588 aa14.34□□□□□ -0.11
SMAD6-201ENST00000288840 C14orf28Q4W4Y0 310 aa14.34□□□□□ -0.11
SMAD6-201ENST00000288840 ZNF704Q6ZNC4 412 aaPredicted RBP14.34□□□□□ -0.11
SMAD6-201ENST00000288840 PXKQ7Z7A4 578 aa14.34□□□□□ -0.11
SMAD6-201ENST00000288840 MUC20Q8N307 709 aaPredicted RBP14.34□□□□□ -0.11
SMAD6-201ENST00000288840 OR1L3Q8NH93 324 aa14.34□□□□□ -0.11
SMAD6-201ENST00000288840 FSCN3Q9NQT6 498 aa14.34□□□□□ -0.11
SMAD6-201ENST00000288840 MRPS17Q9Y2R5 130 aaKnown RBP14.34□□□□□ -0.11
SMAD6-201ENST00000288840 RNF215Q9Y6U7 377 aa14.34□□□□□ -0.11
SMAD6-201ENST00000288840 LRRK1Q38SD2 2015 aa14.34□□□□□ -0.11
SMAD6-201ENST00000288840 A0A1B0GV50 99 aa14.34□□□□□ -0.11
SMAD6-201ENST00000288840 PHYHO14832 338 aa14.34□□□□□ -0.11
SMAD6-201ENST00000288840 AGPAT2O15120 278 aa14.34□□□□□ -0.11
SMAD6-201ENST00000288840 IL33O95760 270 aa14.34□□□□□ -0.11
SMAD6-201ENST00000288840 CALCBP10092 127 aa14.34□□□□□ -0.11
SMAD6-201ENST00000288840 RPS4Y1P22090 263 aaKnown RBP14.34□□□□□ -0.11
SMAD6-201ENST00000288840 ACHEP22303 614 aa14.34□□□□□ -0.11
SMAD6-201ENST00000288840 MRPS10P82664 201 aaKnown RBP14.34□□□□□ -0.11
SMAD6-201ENST00000288840 FAM199XQ6PEV8 388 aaPredicted RBP14.34□□□□□ -0.11
SMAD6-201ENST00000288840 OTOSQ8NHW6 89 aa14.34□□□□□ -0.11
SMAD6-201ENST00000288840 C4orf45Q96LM5 186 aa14.34□□□□□ -0.11
SMAD6-201ENST00000288840 LRP12Q9Y561 859 aa14.34□□□□□ -0.11
SMAD6-201ENST00000288840 TRAPPC6AO75865 159 aa14.33□□□□□ -0.11
SMAD6-201ENST00000288840 SLC37A1P57057 533 aa14.33□□□□□ -0.11
SMAD6-201ENST00000288840 PMPCAQ10713 525 aa14.33□□□□□ -0.11
SMAD6-201ENST00000288840 LCN10Q6JVE6 187 aa14.33□□□□□ -0.11
SMAD6-201ENST00000288840 FAM57BQ71RH2 274 aa14.33□□□□□ -0.11
SMAD6-201ENST00000288840 FGF11Q92914 225 aa14.33□□□□□ -0.11
SMAD6-201ENST00000288840 PGAM5Q96HS1 289 aa14.33□□□□□ -0.11
SMAD6-201ENST00000288840 TREM1Q9NP99 234 aa14.33□□□□□ -0.11
SMAD6-201ENST00000288840 ZFP64Q9NPA5 681 aa14.33□□□□□ -0.11
SMAD6-201ENST00000288840 HIF3AQ9Y2N7 669 aa14.33□□□□□ -0.11
SMAD6-201ENST00000288840 TAS2R19P59542 299 aa14.33□□□□□ -0.12
SMAD6-201ENST00000288840 SEC61A1P61619 476 aaKnown RBP14.33□□□□□ -0.12
SMAD6-201ENST00000288840 TRILQ7L0X0 811 aa14.33□□□□□ -0.12
SMAD6-201ENST00000288840 UEVLDQ8IX04 471 aa14.33□□□□□ -0.12
SMAD6-201ENST00000288840 GABRG1Q8N1C3 465 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms