RNA–Protein interactions for RNA: ENST00000284771.6

PDLIM3-203, Transcript of PDZ and LIM domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM3, Length 1,672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-203ENST00000284771 ATP6V1E1P36543 226 aa19.08■□□□□ 0.64
PDLIM3-203ENST00000284771 CHN2P52757 468 aa19.08■□□□□ 0.64
PDLIM3-203ENST00000284771 TGFBR3Q03167 851 aa19.08■□□□□ 0.64
PDLIM3-203ENST00000284771 POU4F2Q12837 409 aa19.08■□□□□ 0.64
PDLIM3-203ENST00000284771 SLC25A35Q3KQZ1 300 aa19.08■□□□□ 0.64
PDLIM3-203ENST00000284771 TBRG1Q3YBR2 411 aa19.08■□□□□ 0.64
PDLIM3-203ENST00000284771 C22orf34Q6ZV56 151 aa19.08■□□□□ 0.64
PDLIM3-203ENST00000284771 CDC20BQ86Y33 519 aa19.08■□□□□ 0.64
PDLIM3-203ENST00000284771 CA5BP1Q8WTZ4 195 aa19.08■□□□□ 0.64
PDLIM3-203ENST00000284771 SIGLEC11Q96RL6 698 aa19.08■□□□□ 0.64
PDLIM3-203ENST00000284771 AMELYQ99218 206 aa19.08■□□□□ 0.64
PDLIM3-203ENST00000284771 ZNF649Q9BS31 505 aa19.08■□□□□ 0.64
PDLIM3-203ENST00000284771 SCN3BQ9NY72 215 aa19.08■□□□□ 0.64
PDLIM3-203ENST00000284771 CNOT2Q9NZN8 540 aaKnown RBP19.08■□□□□ 0.64
PDLIM3-203ENST00000284771 ASH2LQ9UBL3 628 aa19.08■□□□□ 0.64
PDLIM3-203ENST00000284771 CIB4A0PJX0 185 aa19.07■□□□□ 0.64
PDLIM3-203ENST00000284771 TRIM64A6NGJ6 449 aa19.07■□□□□ 0.64
PDLIM3-203ENST00000284771 PIPP12273 146 aaPredicted RBP19.07■□□□□ 0.64
PDLIM3-203ENST00000284771 CCKARP32238 428 aa19.07■□□□□ 0.64
PDLIM3-203ENST00000284771 CD79BP40259 229 aa19.07■□□□□ 0.64
PDLIM3-203ENST00000284771 SRSF1Q07955 248 aaKnown RBP eCLIP19.07■□□□□ 0.64
PDLIM3-203ENST00000284771 KLHL22Q53GT1 634 aa19.07■□□□□ 0.64
PDLIM3-203ENST00000284771 OTOSQ8NHW6 89 aa19.07■□□□□ 0.64
PDLIM3-203ENST00000284771 TBX5Q99593 518 aa19.07■□□□□ 0.64
PDLIM3-203ENST00000284771 COPS4Q9BT78 406 aa19.07■□□□□ 0.64
PDLIM3-203ENST00000284771 YTHDF1Q9BYJ9 559 aaKnown RBP19.07■□□□□ 0.64
PDLIM3-203ENST00000284771 FGF20Q9NP95 211 aaPredicted RBP19.07■□□□□ 0.64
PDLIM3-203ENST00000284771 ELOVL5Q9NYP7 299 aa19.07■□□□□ 0.64
PDLIM3-203ENST00000284771 ERVK-18Q9QC07 812 aa19.07■□□□□ 0.64
PDLIM3-203ENST00000284771 TPRKBQ9Y3C4 175 aa19.07■□□□□ 0.64
PDLIM3-203ENST00000284771 A0A1W2PR80 420 aa19.06■□□□□ 0.64
PDLIM3-203ENST00000284771 PRR32B1ATL7 298 aa19.06■□□□□ 0.64
PDLIM3-203ENST00000284771 CST2P09228 141 aa19.06■□□□□ 0.64
PDLIM3-203ENST00000284771 SPARCP09486 303 aa19.06■□□□□ 0.64
PDLIM3-203ENST00000284771 ALOX5APP20292 161 aa19.06■□□□□ 0.64
PDLIM3-203ENST00000284771 TUBA1BP68363 451 aa19.06■□□□□ 0.64
PDLIM3-203ENST00000284771 TUBA4AP68366 448 aa19.06■□□□□ 0.64
PDLIM3-203ENST00000284771 SLC18B1Q6NT16 456 aa19.06■□□□□ 0.64
PDLIM3-203ENST00000284771 TUBA1AQ71U36 451 aa19.06■□□□□ 0.64
PDLIM3-203ENST00000284771 BHLHA15Q7RTS1 189 aaPredicted RBP19.06■□□□□ 0.64
PDLIM3-203ENST00000284771 SSX6Q7RTT6 188 aa19.06■□□□□ 0.64
PDLIM3-203ENST00000284771 SLC35F2Q8IXU6 374 aa19.06■□□□□ 0.64
PDLIM3-203ENST00000284771 OR10H5Q8NGA6 315 aa19.06■□□□□ 0.64
PDLIM3-203ENST00000284771 MAP6Q96JE9 813 aa19.06■□□□□ 0.64
PDLIM3-203ENST00000284771 NOX3Q9HBY0 568 aa19.06■□□□□ 0.64
PDLIM3-203ENST00000284771 A0A1W2PQL4 384 aaPredicted RBP19.05■□□□□ 0.64
PDLIM3-203ENST00000284771 EFCAB10A6NFE3 127 aa19.05■□□□□ 0.64
PDLIM3-203ENST00000284771 C12orf71A8MTZ7 269 aa19.05■□□□□ 0.64
PDLIM3-203ENST00000284771 RER1O15258 196 aa19.05■□□□□ 0.64
PDLIM3-203ENST00000284771 FADS2O95864 444 aaKnown RBP19.05■□□□□ 0.64
PDLIM3-203ENST00000284771 WNT11O96014 354 aa19.05■□□□□ 0.64
PDLIM3-203ENST00000284771 IGHA1P01876 353 aa19.05■□□□□ 0.64
PDLIM3-203ENST00000284771 HLA-HP01893 362 aa19.05■□□□□ 0.64
PDLIM3-203ENST00000284771 MMP7P09237 267 aaPredicted RBP19.05■□□□□ 0.64
PDLIM3-203ENST00000284771 ASCL1P50553 236 aa19.05■□□□□ 0.64
PDLIM3-203ENST00000284771 CDH15P55291 814 aa19.05■□□□□ 0.64
PDLIM3-203ENST00000284771 FBXL19-AS1Q494R0 122 aa19.05■□□□□ 0.64
PDLIM3-203ENST00000284771 OR7E24Q6IFN5 339 aa19.05■□□□□ 0.64
PDLIM3-203ENST00000284771 SLC16A14Q7RTX9 510 aa19.05■□□□□ 0.64
PDLIM3-203ENST00000284771 WDR31Q8NA23 367 aa19.05■□□□□ 0.64
PDLIM3-203ENST00000284771 C1orf162Q8NEQ5 155 aaPredicted RBP19.05■□□□□ 0.64
PDLIM3-203ENST00000284771 ST7LQ8TDW4 575 aa19.05■□□□□ 0.64
PDLIM3-203ENST00000284771 CDADC1Q9BWV3 514 aa19.05■□□□□ 0.64
PDLIM3-203ENST00000284771 YIPF3Q9GZM5 350 aa19.05■□□□□ 0.64
PDLIM3-203ENST00000284771 FARS2O95363 451 aaKnown RBP19.05■□□□□ 0.64
PDLIM3-203ENST00000284771 CDK1P06493 297 aa19.05■□□□□ 0.64
PDLIM3-203ENST00000284771 OR2T7P0C7T2 308 aa19.05■□□□□ 0.64
PDLIM3-203ENST00000284771 RNF224P0DH78 156 aa19.05■□□□□ 0.64
PDLIM3-203ENST00000284771 ZNF32P17041 273 aa19.05■□□□□ 0.64
PDLIM3-203ENST00000284771 GRNP28799 593 aaKnown RBP19.05■□□□□ 0.64
PDLIM3-203ENST00000284771 UGT2B10P36537 528 aa19.05■□□□□ 0.64
PDLIM3-203ENST00000284771 ZNF85Q03923 595 aa19.05■□□□□ 0.64
PDLIM3-203ENST00000284771 TFF3Q07654 80 aa19.05■□□□□ 0.64
PDLIM3-203ENST00000284771 XKRXQ6PP77 449 aa19.05■□□□□ 0.64
PDLIM3-203ENST00000284771 CFAP77Q6ZQR2 320 aa19.05■□□□□ 0.64
PDLIM3-203ENST00000284771 DCXRQ7Z4W1 244 aa19.05■□□□□ 0.64
PDLIM3-203ENST00000284771 OR10H4Q8NGA5 316 aa19.05■□□□□ 0.64
PDLIM3-203ENST00000284771 OR10S1Q8NGN2 331 aa19.05■□□□□ 0.64
PDLIM3-203ENST00000284771 OR2T27Q8NH04 317 aa19.05■□□□□ 0.64
PDLIM3-203ENST00000284771 S100PBPQ96BU1 408 aa19.05■□□□□ 0.64
PDLIM3-203ENST00000284771 TMEM80Q96HE8 168 aa19.05■□□□□ 0.64
PDLIM3-203ENST00000284771 NR1H4Q96RI1 486 aaPredicted RBP19.05■□□□□ 0.64
PDLIM3-203ENST00000284771 ABHD6Q9BV23 337 aa19.05■□□□□ 0.64
PDLIM3-203ENST00000284771 TTTY10Q9BZA0 68 aa19.05■□□□□ 0.64
PDLIM3-203ENST00000284771 B3GNT2Q9NY97 397 aa19.05■□□□□ 0.64
PDLIM3-203ENST00000284771 GDF2Q9UK05 429 aaPredicted RBP19.05■□□□□ 0.64
PDLIM3-203ENST00000284771 DIMT1Q9UNQ2 313 aaKnown RBP19.05■□□□□ 0.64
PDLIM3-203ENST00000284771 MAGEB4O15481 346 aaPredicted RBP19.04■□□□□ 0.64
PDLIM3-203ENST00000284771 PLA2G2AP14555 144 aa19.04■□□□□ 0.64
PDLIM3-203ENST00000284771 AGAP20933 346 aa19.04■□□□□ 0.64
PDLIM3-203ENST00000284771 DCKP27707 260 aa19.04■□□□□ 0.64
PDLIM3-203ENST00000284771 HIST1H3AP68431 136 aa19.04■□□□□ 0.64
PDLIM3-203ENST00000284771 AQP6Q13520 282 aa19.04■□□□□ 0.64
PDLIM3-203ENST00000284771 HIST2H3PS2Q5TEC6 136 aa19.04■□□□□ 0.64
PDLIM3-203ENST00000284771 HIST2H3AQ71DI3 136 aa19.04■□□□□ 0.64
PDLIM3-203ENST00000284771 LHFPL3Q86UP9 236 aa19.04■□□□□ 0.64
PDLIM3-203ENST00000284771 ACBD7Q8N6N7 88 aa19.04■□□□□ 0.64
PDLIM3-203ENST00000284771 IPCEF1Q8WWN9 437 aaPredicted RBP19.04■□□□□ 0.64
PDLIM3-203ENST00000284771 HDHD5Q9BXW7 423 aa19.04■□□□□ 0.64
PDLIM3-203ENST00000284771 SLC17A5Q9NRA2 495 aa19.04■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms