RNA–Protein interactions for RNA: ENST00000278385.10

CD44-202, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 697 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-202ENST00000278385 UBE2MP61081 183 aaKnown RBP3.93□□□□□ -1.78
CD44-202ENST00000278385 UBE2KP61086 200 aa3.93□□□□□ -1.78
CD44-202ENST00000278385 C2orf54Q08AI8 447 aa3.93□□□□□ -1.78
CD44-202ENST00000278385 INCA1Q0VD86 236 aa3.93□□□□□ -1.78
CD44-202ENST00000278385 CNTN1Q12860 1018 aa3.93□□□□□ -1.78
CD44-202ENST00000278385 PNOCQ13519 176 aa3.93□□□□□ -1.78
CD44-202ENST00000278385 TPBGQ13641 420 aa3.93□□□□□ -1.78
CD44-202ENST00000278385 SPCS2Q15005 226 aa3.93□□□□□ -1.78
CD44-202ENST00000278385 PSG5Q15238 335 aa3.93□□□□□ -1.78
CD44-202ENST00000278385 LRRC37A5PQ49AS3 106 aa3.93□□□□□ -1.78
CD44-202ENST00000278385 ZCWPW2Q504Y3 356 aa3.93□□□□□ -1.78
CD44-202ENST00000278385 AKIRIN2Q53H80 203 aa3.93□□□□□ -1.78
CD44-202ENST00000278385 TPRG1LQ5T0D9 272 aa3.93□□□□□ -1.78
CD44-202ENST00000278385 PDSS1Q5T2R2 415 aa3.93□□□□□ -1.78
CD44-202ENST00000278385 ASPHD1Q5U4P2 390 aa3.93□□□□□ -1.78
CD44-202ENST00000278385 STEAP1BQ6NZ63 245 aa3.93□□□□□ -1.78
CD44-202ENST00000278385 Q6ZRG5 221 aa3.93□□□□□ -1.78
CD44-202ENST00000278385 CYS1Q717R9 158 aa3.93□□□□□ -1.78
CD44-202ENST00000278385 Q71RC1 249 aaPredicted RBP3.93□□□□□ -1.78
CD44-202ENST00000278385 PIM3Q86V86 326 aa3.93□□□□□ -1.78
CD44-202ENST00000278385 HS3ST5Q8IZT8 346 aa3.93□□□□□ -1.78
CD44-202ENST00000278385 PGAM4Q8N0Y7 254 aa3.93□□□□□ -1.78
CD44-202ENST00000278385 LMNTD1Q8N9Z9 388 aa3.93□□□□□ -1.78
CD44-202ENST00000278385 SUMF1Q8NBK3 374 aa3.93□□□□□ -1.78
CD44-202ENST00000278385 OR5L2Q8NGL0 311 aa3.93□□□□□ -1.78
CD44-202ENST00000278385 OR5M9Q8NGP3 310 aa3.93□□□□□ -1.78
CD44-202ENST00000278385 OR2Y1Q8NGV0 311 aa3.93□□□□□ -1.78
CD44-202ENST00000278385 C16orf52Q8NHV5 167 aa3.93□□□□□ -1.78
CD44-202ENST00000278385 BAALCQ8WXS3 180 aa3.93□□□□□ -1.78
CD44-202ENST00000278385 PIK3R3Q92569 461 aa3.93□□□□□ -1.78
CD44-202ENST00000278385 ART4Q93070 314 aa3.93□□□□□ -1.78
CD44-202ENST00000278385 NTAN1Q96AB6 310 aa3.93□□□□□ -1.78
CD44-202ENST00000278385 NXPE2Q96DL1 559 aa3.93□□□□□ -1.78
CD44-202ENST00000278385 UTP23Q9BRU9 249 aaKnown RBP3.93□□□□□ -1.78
CD44-202ENST00000278385 WACQ9BTA9 647 aa3.93□□□□□ -1.78
CD44-202ENST00000278385 UBXN6Q9BZV1 441 aa3.93□□□□□ -1.78
CD44-202ENST00000278385 ACTR3CQ9C0K3 210 aaPredicted RBP3.93□□□□□ -1.78
CD44-202ENST00000278385 C6orf62Q9GZU0 229 aaPredicted RBP3.93□□□□□ -1.78
CD44-202ENST00000278385 MMP28Q9H239 520 aa3.93□□□□□ -1.78
CD44-202ENST00000278385 TUBB1Q9H4B7 451 aa3.93□□□□□ -1.78
CD44-202ENST00000278385 S100A14Q9HCY8 104 aa3.93□□□□□ -1.78
CD44-202ENST00000278385 TMEM45AQ9NWC5 275 aa3.93□□□□□ -1.78
CD44-202ENST00000278385 ELOVL5Q9NYP7 299 aa3.93□□□□□ -1.78
CD44-202ENST00000278385 BFARQ9NZS9 450 aa3.93□□□□□ -1.78
CD44-202ENST00000278385 UVRAGQ9P2Y5 699 aa3.93□□□□□ -1.78
CD44-202ENST00000278385 PURGQ9UJV8 347 aaKnown RBP3.93□□□□□ -1.78
CD44-202ENST00000278385 STOML2Q9UJZ1 356 aa3.93□□□□□ -1.78
CD44-202ENST00000278385 FBXL4Q9UKA2 621 aa3.93□□□□□ -1.78
CD44-202ENST00000278385 PILRBQ9UKJ0 227 aa3.93□□□□□ -1.78
CD44-202ENST00000278385 CCL26Q9Y258 94 aa3.93□□□□□ -1.78
CD44-202ENST00000278385 YARS2Q9Y2Z4 477 aaKnown RBP3.93□□□□□ -1.78
CD44-202ENST00000278385 AK6Q9Y3D8 172 aaKnown RBP3.93□□□□□ -1.78
CD44-202ENST00000278385 WIPI2Q9Y4P8 454 aa3.93□□□□□ -1.78
CD44-202ENST00000278385 POLR3HQ9Y535 204 aaPredicted RBP3.93□□□□□ -1.78
CD44-202ENST00000278385 CPQQ9Y646 472 aa3.93□□□□□ -1.78
CD44-202ENST00000278385 TDRD15B5MCY1 1934 aaKnown RBP3.93□□□□□ -1.78
CD44-202ENST00000278385 PLXNA3P51805 1871 aa3.92□□□□□ -1.78
CD44-202ENST00000278385 NCOR1O75376 2440 aa3.92□□□□□ -1.78
CD44-202ENST00000278385 NPIPA5A0A0B4J1W7 369 aa3.92□□□□□ -1.78
CD44-202ENST00000278385 C5orf60A6NFR6 353 aa3.92□□□□□ -1.78
CD44-202ENST00000278385 A8MX80 341 aa3.92□□□□□ -1.78
CD44-202ENST00000278385 NPIPA5E9PKD4 350 aa3.92□□□□□ -1.78
CD44-202ENST00000278385 H3BNX3 289 aa3.92□□□□□ -1.78
CD44-202ENST00000278385 DCTN6O00399 190 aa3.92□□□□□ -1.78
CD44-202ENST00000278385 EIF4E2O60573 245 aaKnown RBP3.92□□□□□ -1.78
CD44-202ENST00000278385 SNAPINO95295 136 aa3.92□□□□□ -1.78
CD44-202ENST00000278385 AP2A1O95782 977 aa3.92□□□□□ -1.78
CD44-202ENST00000278385 SYF2O95926 243 aaKnown RBP3.92□□□□□ -1.78
CD44-202ENST00000278385 OAS1P00973 400 aaKnown RBP3.92□□□□□ -1.78
CD44-202ENST00000278385 TDGF1P13385 188 aa3.92□□□□□ -1.78
CD44-202ENST00000278385 OR1E1P30953 314 aa3.92□□□□□ -1.78
CD44-202ENST00000278385 DNASE1L1P49184 302 aa3.92□□□□□ -1.78
CD44-202ENST00000278385 CCL7P80098 99 aa3.92□□□□□ -1.78
CD44-202ENST00000278385 C2orf80Q0P641 193 aa3.92□□□□□ -1.78
CD44-202ENST00000278385 KLF9Q13886 244 aaPredicted RBP3.92□□□□□ -1.78
CD44-202ENST00000278385 DPYSL3Q14195 570 aa3.92□□□□□ -1.78
CD44-202ENST00000278385 GUK1Q16774 197 aa3.92□□□□□ -1.78
CD44-202ENST00000278385 HAGHQ16775 308 aa3.92□□□□□ -1.78
CD44-202ENST00000278385 ZNF672Q499Z4 452 aaPredicted RBP3.92□□□□□ -1.78
CD44-202ENST00000278385 DDI2Q5TDH0 399 aa3.92□□□□□ -1.78
CD44-202ENST00000278385 OR2G6Q5TZ20 316 aa3.92□□□□□ -1.78
CD44-202ENST00000278385 FAHD1Q6P587 224 aa3.92□□□□□ -1.78
CD44-202ENST00000278385 SPESP1Q6UW49 350 aa3.92□□□□□ -1.78
CD44-202ENST00000278385 BTNL3Q6UXE8 466 aa3.92□□□□□ -1.78
CD44-202ENST00000278385 SLC25A48Q6ZT89 311 aaKnown RBP3.92□□□□□ -1.78
CD44-202ENST00000278385 SSX7Q7RTT5 188 aa3.92□□□□□ -1.78
CD44-202ENST00000278385 NUFIP2Q7Z417 695 aaKnown RBP3.92□□□□□ -1.78
CD44-202ENST00000278385 SLC51BQ86UW2 128 aa3.92□□□□□ -1.78
CD44-202ENST00000278385 GLCCI1Q86VQ1 547 aa3.92□□□□□ -1.78
CD44-202ENST00000278385 ENTHD1Q8IYW4 607 aa3.92□□□□□ -1.78
CD44-202ENST00000278385 Q8N402 240 aa3.92□□□□□ -1.78
CD44-202ENST00000278385 C2orf73Q8N5S3 287 aaPredicted RBP3.92□□□□□ -1.78
CD44-202ENST00000278385 C12orf29Q8N999 325 aa3.92□□□□□ -1.78
CD44-202ENST00000278385 OR6K2Q8NGY2 324 aa3.92□□□□□ -1.78
CD44-202ENST00000278385 LYPD6BQ8NI32 183 aa3.92□□□□□ -1.78
CD44-202ENST00000278385 MPLKIPQ8TAP9 179 aa3.92□□□□□ -1.78
CD44-202ENST00000278385 CNIH3Q8TBE1 160 aa3.92□□□□□ -1.78
CD44-202ENST00000278385 SPPL2AQ8TCT8 520 aa3.92□□□□□ -1.78
CD44-202ENST00000278385 PYDC1Q8WXC3 89 aa3.92□□□□□ -1.78
CD44-202ENST00000278385 RORBQ92753 470 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms