RNA–Protein interactions for RNA: ENST00000274901.8

HMGCLL1-201, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCLL1, Length 2,475 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-201ENST00000274901 FAM76BQ5HYJ3 339 aa8.29□□□□□ -1.08
HMGCLL1-201ENST00000274901 LINC01590Q5TEZ4 76 aa8.29□□□□□ -1.08
HMGCLL1-201ENST00000274901 GFI1BQ5VTD9 330 aa8.29□□□□□ -1.08
HMGCLL1-201ENST00000274901 SLC48A1Q6P1K1 146 aa8.29□□□□□ -1.08
HMGCLL1-201ENST00000274901 BEND4Q6ZU67 534 aa8.29□□□□□ -1.08
HMGCLL1-201ENST00000274901 REC114Q7Z4M0 266 aa8.29□□□□□ -1.08
HMGCLL1-201ENST00000274901 SPRED2Q7Z698 418 aa8.29□□□□□ -1.08
HMGCLL1-201ENST00000274901 SLC25A42Q86VD7 318 aa8.29□□□□□ -1.08
HMGCLL1-201ENST00000274901 STX12Q86Y82 276 aa8.29□□□□□ -1.08
HMGCLL1-201ENST00000274901 TMEM229BQ8NBD8 167 aa8.29□□□□□ -1.08
HMGCLL1-201ENST00000274901 SEMA6DQ8NFY4 1073 aa8.29□□□□□ -1.08
HMGCLL1-201ENST00000274901 GPR148Q8TDV2 347 aa8.29□□□□□ -1.08
HMGCLL1-201ENST00000274901 BADQ92934 168 aa8.29□□□□□ -1.08
HMGCLL1-201ENST00000274901 TMEM106AQ96A25 262 aa8.29□□□□□ -1.08
HMGCLL1-201ENST00000274901 RAB7BQ96AH8 199 aa8.29□□□□□ -1.08
HMGCLL1-201ENST00000274901 FAM3DQ96BQ1 224 aa8.29□□□□□ -1.08
HMGCLL1-201ENST00000274901 SDF2Q99470 211 aa8.29□□□□□ -1.08
HMGCLL1-201ENST00000274901 SOX7Q9BT81 388 aa8.29□□□□□ -1.08
HMGCLL1-201ENST00000274901 TMEM106CQ9BVX2 250 aa8.29□□□□□ -1.08
HMGCLL1-201ENST00000274901 LGR4Q9BXB1 951 aa8.29□□□□□ -1.08
HMGCLL1-201ENST00000274901 POTEKPQ9BYX7 375 aa8.29□□□□□ -1.08
HMGCLL1-201ENST00000274901 ZNF350Q9GZX5 532 aa8.29□□□□□ -1.08
HMGCLL1-201ENST00000274901 PRDM7Q9NQW5 492 aa8.29□□□□□ -1.08
HMGCLL1-201ENST00000274901 TM7SF3Q9NS93 570 aa8.29□□□□□ -1.08
HMGCLL1-201ENST00000274901 PISDQ9UG56 409 aa8.29□□□□□ -1.08
HMGCLL1-201ENST00000274901 ARID1BQ8NFD5 2236 aaPredicted RBP8.29□□□□□ -1.08
HMGCLL1-201ENST00000274901 WIPF3A6NGB9 483 aa8.29□□□□□ -1.08
HMGCLL1-201ENST00000274901 LEFTY2O00292 366 aa8.29□□□□□ -1.08
HMGCLL1-201ENST00000274901 SRPX2O60687 465 aaPredicted RBP8.29□□□□□ -1.08
HMGCLL1-201ENST00000274901 IFNGP01579 166 aa8.29□□□□□ -1.08
HMGCLL1-201ENST00000274901 PMP2P02689 132 aa8.29□□□□□ -1.08
HMGCLL1-201ENST00000274901 HIST1H1TP22492 207 aaPredicted RBP8.29□□□□□ -1.08
HMGCLL1-201ENST00000274901 VAMP1P23763 118 aa8.29□□□□□ -1.08
HMGCLL1-201ENST00000274901 SLC6A6P31641 620 aa8.29□□□□□ -1.08
HMGCLL1-201ENST00000274901 BCL6P41182 706 aa8.29□□□□□ -1.08
HMGCLL1-201ENST00000274901 RBM34P42696 430 aaKnown RBP8.29□□□□□ -1.08
HMGCLL1-201ENST00000274901 LSM6P62312 80 aaKnown RBP8.29□□□□□ -1.08
HMGCLL1-201ENST00000274901 SKP1P63208 163 aa8.29□□□□□ -1.08
HMGCLL1-201ENST00000274901 SLC9A5Q14940 896 aa8.29□□□□□ -1.08
HMGCLL1-201ENST00000274901 SURF2Q15527 256 aaPredicted RBP8.29□□□□□ -1.08
HMGCLL1-201ENST00000274901 NSUN5P2Q63ZY6 315 aa8.29□□□□□ -1.08
HMGCLL1-201ENST00000274901 ZNF627Q7L945 461 aa8.29□□□□□ -1.08
HMGCLL1-201ENST00000274901 ZAR1Q86SH2 424 aa8.29□□□□□ -1.08
HMGCLL1-201ENST00000274901 RTN4RL2Q86UN3 420 aa8.29□□□□□ -1.08
HMGCLL1-201ENST00000274901 CXorf40AQ8TE69 158 aa8.29□□□□□ -1.08
HMGCLL1-201ENST00000274901 RELTQ969Z4 430 aa8.29□□□□□ -1.08
HMGCLL1-201ENST00000274901 COL26A1Q96A83 441 aa8.29□□□□□ -1.08
HMGCLL1-201ENST00000274901 NEU1Q99519 415 aa8.29□□□□□ -1.08
HMGCLL1-201ENST00000274901 ZNF426Q9BUY5 554 aa8.29□□□□□ -1.08
HMGCLL1-201ENST00000274901 ZDHHC8Q9ULC8 765 aa8.29□□□□□ -1.08
HMGCLL1-201ENST00000274901 OBSL1O75147 1896 aa8.28□□□□□ -1.08
HMGCLL1-201ENST00000274901 A0A1B0GWJ7 208 aa8.28□□□□□ -1.08
HMGCLL1-201ENST00000274901 FITM1A5D6W6 292 aa8.28□□□□□ -1.08
HMGCLL1-201ENST00000274901 C5orf51A6NDU8 294 aa8.28□□□□□ -1.08
HMGCLL1-201ENST00000274901 OR4C45A6NMZ5 311 aa8.28□□□□□ -1.08
HMGCLL1-201ENST00000274901 ZNF736B4DX44 427 aaPredicted RBP8.28□□□□□ -1.08
HMGCLL1-201ENST00000274901 LDB3O75112 727 aa8.28□□□□□ -1.08
HMGCLL1-201ENST00000274901 COX5BP10606 129 aa8.28□□□□□ -1.08
HMGCLL1-201ENST00000274901 EN2P19622 333 aaPredicted RBP8.28□□□□□ -1.08
HMGCLL1-201ENST00000274901 PBX2P40425 430 aa8.28□□□□□ -1.08
HMGCLL1-201ENST00000274901 SPCS3P61009 180 aa8.28□□□□□ -1.08
HMGCLL1-201ENST00000274901 POLR2LP62875 67 aaKnown RBP8.28□□□□□ -1.08
HMGCLL1-201ENST00000274901 TRA2BP62995 288 aaKnown RBP8.28□□□□□ -1.08
HMGCLL1-201ENST00000274901 IL13RA1P78552 427 aa8.28□□□□□ -1.08
HMGCLL1-201ENST00000274901 DUSP8Q13202 625 aa8.28□□□□□ -1.08
HMGCLL1-201ENST00000274901 MEF2DQ14814 521 aa8.28□□□□□ -1.08
HMGCLL1-201ENST00000274901 RPL7L1Q6DKI1 246 aaKnown RBP8.28□□□□□ -1.08
HMGCLL1-201ENST00000274901 OR4N5Q8IXE1 308 aa8.28□□□□□ -1.08
HMGCLL1-201ENST00000274901 CDK20Q8IZL9 346 aa8.28□□□□□ -1.08
HMGCLL1-201ENST00000274901 PRSS35Q8N3Z0 413 aa8.28□□□□□ -1.08
HMGCLL1-201ENST00000274901 PLPP7Q8NBV4 271 aa8.28□□□□□ -1.08
HMGCLL1-201ENST00000274901 OR2G2Q8NGZ5 317 aa8.28□□□□□ -1.08
HMGCLL1-201ENST00000274901 OR51F2Q8NH61 342 aa8.28□□□□□ -1.08
HMGCLL1-201ENST00000274901 ZNF563Q8TA94 476 aa8.28□□□□□ -1.08
HMGCLL1-201ENST00000274901 S100PBPQ96BU1 408 aa8.28□□□□□ -1.08
HMGCLL1-201ENST00000274901 MS4A6EQ96DS6 147 aa8.28□□□□□ -1.08
HMGCLL1-201ENST00000274901 CYYR1Q96J86 154 aa8.28□□□□□ -1.08
HMGCLL1-201ENST00000274901 YPEL4Q96NS1 127 aa8.28□□□□□ -1.08
HMGCLL1-201ENST00000274901 SCRT1Q9BWW7 348 aa8.28□□□□□ -1.08
HMGCLL1-201ENST00000274901 RAB33BQ9H082 229 aa8.28□□□□□ -1.08
HMGCLL1-201ENST00000274901 IL23AQ9NPF7 189 aa8.28□□□□□ -1.08
HMGCLL1-201ENST00000274901 MRPS33Q9Y291 106 aaKnown RBP8.28□□□□□ -1.08
HMGCLL1-201ENST00000274901 AMDHD2Q9Y303 409 aa8.28□□□□□ -1.08
HMGCLL1-201ENST00000274901 TMEM235A6NFC5 223 aa8.28□□□□□ -1.08
HMGCLL1-201ENST00000274901 H7C1Q1 480 aa8.28□□□□□ -1.08
HMGCLL1-201ENST00000274901 M0R036 132 aa8.28□□□□□ -1.08
HMGCLL1-201ENST00000274901 DCTN6O00399 190 aa8.28□□□□□ -1.08
HMGCLL1-201ENST00000274901 SPINT1O43278 529 aa8.28□□□□□ -1.08
HMGCLL1-201ENST00000274901 ADH1AP07327 375 aa8.28□□□□□ -1.08
HMGCLL1-201ENST00000274901 ELFN1P0C7U0 828 aa8.28□□□□□ -1.08
HMGCLL1-201ENST00000274901 ERGP11308 486 aa8.28□□□□□ -1.08
HMGCLL1-201ENST00000274901 LAMP2P13473 410 aa8.28□□□□□ -1.08
HMGCLL1-201ENST00000274901 HIST1H1BP16401 226 aaKnown RBP8.28□□□□□ -1.08
HMGCLL1-201ENST00000274901 AKR1C4P17516 323 aa8.28□□□□□ -1.08
HMGCLL1-201ENST00000274901 RPS4Y1P22090 263 aaKnown RBP8.28□□□□□ -1.08
HMGCLL1-201ENST00000274901 DDTP30046 118 aa8.28□□□□□ -1.08
HMGCLL1-201ENST00000274901 SLC6A9P48067 706 aa8.28□□□□□ -1.08
HMGCLL1-201ENST00000274901 SULT1A1P50225 295 aa8.28□□□□□ -1.08
HMGCLL1-201ENST00000274901 RAB5CP51148 216 aa8.28□□□□□ -1.08
HMGCLL1-201ENST00000274901 ACTBP60709 375 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms