RNA–Protein interactions for RNA: ENST00000273064.10

CNOT9-201, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNOT9, Length 4,079 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-201ENST00000273064 SHANK1Q9Y566 2161 aa13.21□□□□□ -0.3
CNOT9-201ENST00000273064 TMEM82A0PJX8 343 aa13.21□□□□□ -0.3
CNOT9-201ENST00000273064 RGS11O94810 467 aa13.21□□□□□ -0.3
CNOT9-201ENST00000273064 RLN2P04090 185 aa13.21□□□□□ -0.3
CNOT9-201ENST00000273064 THY1P04216 161 aa13.21□□□□□ -0.3
CNOT9-201ENST00000273064 CCR5P51681 352 aa13.21□□□□□ -0.3
CNOT9-201ENST00000273064 RNF4P78317 190 aa13.21□□□□□ -0.3
CNOT9-201ENST00000273064 HSF1Q00613 529 aa13.21□□□□□ -0.3
CNOT9-201ENST00000273064 INPP5JQ15735 1006 aaPredicted RBP13.21□□□□□ -0.3
CNOT9-201ENST00000273064 OR5H2Q8NGV7 314 aa13.21□□□□□ -0.3
CNOT9-201ENST00000273064 ZBTB8AQ96BR9 441 aa13.21□□□□□ -0.3
CNOT9-201ENST00000273064 HRASLSQ9HDD0 168 aa13.21□□□□□ -0.3
CNOT9-201ENST00000273064 POLE3Q9NRF9 147 aa13.21□□□□□ -0.3
CNOT9-201ENST00000273064 MMACHCQ9Y4U1 282 aa13.21□□□□□ -0.3
CNOT9-201ENST00000273064 IGHV1OR21-1A0A087WYE8 117 aa13.2□□□□□ -0.3
CNOT9-201ENST00000273064 PRSS37A4D1T9 235 aa13.2□□□□□ -0.3
CNOT9-201ENST00000273064 RECKO95980 971 aa13.2□□□□□ -0.3
CNOT9-201ENST00000273064 GUSBP08236 651 aa13.2□□□□□ -0.3
CNOT9-201ENST00000273064 UNQ6126/PRO20091Q6UXV3 157 aa13.2□□□□□ -0.3
CNOT9-201ENST00000273064 CD300LDQ6UXZ3 194 aa13.2□□□□□ -0.3
CNOT9-201ENST00000273064 P4HA3Q7Z4N8 544 aa13.2□□□□□ -0.3
CNOT9-201ENST00000273064 AGBL5Q8NDL9 886 aa13.2□□□□□ -0.3
CNOT9-201ENST00000273064 FBLIM1Q8WUP2 373 aa13.2□□□□□ -0.3
CNOT9-201ENST00000273064 PIGCQ92535 297 aa13.2□□□□□ -0.3
CNOT9-201ENST00000273064 PSD2Q9BQI7 771 aa13.2□□□□□ -0.3
CNOT9-201ENST00000273064 A6NIZ1 184 aa13.2□□□□□ -0.3
CNOT9-201ENST00000273064 ZNHIT1O43257 154 aa13.2□□□□□ -0.3
CNOT9-201ENST00000273064 ERGP11308 486 aa13.2□□□□□ -0.3
CNOT9-201ENST00000273064 CXCL3P19876 107 aa13.2□□□□□ -0.3
CNOT9-201ENST00000273064 CASRP41180 1078 aa13.2□□□□□ -0.3
CNOT9-201ENST00000273064 NPY4RP50391 375 aa13.2□□□□□ -0.3
CNOT9-201ENST00000273064 RAP1BP61224 184 aa13.2□□□□□ -0.3
CNOT9-201ENST00000273064 RAP1AP62834 184 aa13.2□□□□□ -0.3
CNOT9-201ENST00000273064 LINC00303Q3SY05 128 aa13.2□□□□□ -0.3
CNOT9-201ENST00000273064 C3orf33Q6P1S2 294 aa13.2□□□□□ -0.3
CNOT9-201ENST00000273064 ZNF767PQ75MW2 155 aa13.2□□□□□ -0.3
CNOT9-201ENST00000273064 DCBLD2Q96PD2 775 aa13.2□□□□□ -0.3
CNOT9-201ENST00000273064 ZNF700Q9H0M5 742 aa13.2□□□□□ -0.3
CNOT9-201ENST00000273064 SLC22A11Q9NSA0 550 aa13.2□□□□□ -0.3
CNOT9-201ENST00000273064 PRRC2CQ9Y520 2896 aaKnown RBP13.2□□□□□ -0.3
CNOT9-201ENST00000273064 MASP2O00187 686 aa13.2□□□□□ -0.3
CNOT9-201ENST00000273064 IFNA21P01568 189 aa13.2□□□□□ -0.3
CNOT9-201ENST00000273064 NGFRP08138 427 aa13.2□□□□□ -0.3
CNOT9-201ENST00000273064 BAMBIQ13145 260 aa13.2□□□□□ -0.3
CNOT9-201ENST00000273064 OPCMLQ14982 345 aa13.2□□□□□ -0.3
CNOT9-201ENST00000273064 FAM219AQ8IW50 185 aa13.2□□□□□ -0.3
CNOT9-201ENST00000273064 ZNF611Q8N823 705 aa13.2□□□□□ -0.3
CNOT9-201ENST00000273064 OR10G3Q8NGC4 313 aa13.2□□□□□ -0.3
CNOT9-201ENST00000273064 ST6GAL2Q96JF0 529 aa13.2□□□□□ -0.3
CNOT9-201ENST00000273064 DHRS1Q96LJ7 313 aa13.2□□□□□ -0.3
CNOT9-201ENST00000273064 ACAD8Q9UKU7 415 aa13.2□□□□□ -0.3
CNOT9-201ENST00000273064 LDOC1O95751 146 aaPredicted RBP13.19□□□□□ -0.3
CNOT9-201ENST00000273064 TMIGD3P0DMS9 266 aaPredicted RBP13.19□□□□□ -0.3
CNOT9-201ENST00000273064 PTGS2P35354 604 aa13.19□□□□□ -0.3
CNOT9-201ENST00000273064 KCNN3Q9UGI6 736 aa13.19□□□□□ -0.3
CNOT9-201ENST00000273064 STEAP1Q9UHE8 339 aa13.19□□□□□ -0.3
CNOT9-201ENST00000273064 LSM5Q9Y4Y9 91 aaKnown RBP13.19□□□□□ -0.3
CNOT9-201ENST00000273064 TSC2P49815 1807 aa13.19□□□□□ -0.3
CNOT9-201ENST00000273064 AIPO00170 330 aa13.19□□□□□ -0.3
CNOT9-201ENST00000273064 ERCC1P07992 297 aaPredicted RBP13.19□□□□□ -0.3
CNOT9-201ENST00000273064 CSF1P09603 554 aa13.19□□□□□ -0.3
CNOT9-201ENST00000273064 FCGR2AP12318 317 aa13.19□□□□□ -0.3
CNOT9-201ENST00000273064 ZNF93P35789 620 aaPredicted RBP13.19□□□□□ -0.3
CNOT9-201ENST00000273064 FOLR3P41439 243 aa13.19□□□□□ -0.3
CNOT9-201ENST00000273064 CCL7P80098 99 aa13.19□□□□□ -0.3
CNOT9-201ENST00000273064 PMPCAQ10713 525 aa13.19□□□□□ -0.3
CNOT9-201ENST00000273064 BCL2A1Q16548 175 aa13.19□□□□□ -0.3
CNOT9-201ENST00000273064 WDR38Q5JTN6 314 aa13.19□□□□□ -0.3
CNOT9-201ENST00000273064 MEX3BQ6ZN04 569 aaKnown RBP13.19□□□□□ -0.3
CNOT9-201ENST00000273064 STEAP2Q8NFT2 490 aa13.19□□□□□ -0.3
CNOT9-201ENST00000273064 OR7G1Q8NGA0 311 aa13.19□□□□□ -0.3
CNOT9-201ENST00000273064 DCUN1D4Q92564 292 aa13.19□□□□□ -0.3
CNOT9-201ENST00000273064 GON7Q9BXV9 100 aa13.19□□□□□ -0.3
CNOT9-201ENST00000273064 LSM2Q9Y333 95 aaKnown RBP13.19□□□□□ -0.3
CNOT9-201ENST00000273064 QDPRP09417 244 aa13.19□□□□□ -0.3
CNOT9-201ENST00000273064 HLA-DOBP13765 273 aa13.19□□□□□ -0.3
CNOT9-201ENST00000273064 GLB1P16278 677 aa13.19□□□□□ -0.3
CNOT9-201ENST00000273064 BLVRBP30043 206 aaPredicted RBP13.19□□□□□ -0.3
CNOT9-201ENST00000273064 PDCD1Q15116 288 aa13.19□□□□□ -0.3
CNOT9-201ENST00000273064 ABI3Q9P2A4 366 aa13.19□□□□□ -0.3
CNOT9-201ENST00000273064 PLPP2O43688 288 aa13.18□□□□□ -0.3
CNOT9-201ENST00000273064 FBXO24O75426 580 aa13.18□□□□□ -0.3
CNOT9-201ENST00000273064 BDKRB2P30411 391 aa13.18□□□□□ -0.3
CNOT9-201ENST00000273064 ACAA2P42765 397 aaKnown RBP13.18□□□□□ -0.3
CNOT9-201ENST00000273064 SEC61A1P61619 476 aaKnown RBP13.18□□□□□ -0.3
CNOT9-201ENST00000273064 OR52W1Q6IF63 320 aa13.18□□□□□ -0.3
CNOT9-201ENST00000273064 FAM71CQ8NEG0 241 aa13.18□□□□□ -0.3
CNOT9-201ENST00000273064 PARP12Q9H0J9 701 aaKnown RBP13.18□□□□□ -0.3
CNOT9-201ENST00000273064 FBXO4Q9UKT5 387 aa13.18□□□□□ -0.3
CNOT9-201ENST00000273064 PRUNE2Q8WUY3 3088 aa13.18□□□□□ -0.3
CNOT9-201ENST00000273064 ADRB1P08588 477 aa13.18□□□□□ -0.3
CNOT9-201ENST00000273064 PER3P56645 1201 aa13.18□□□□□ -0.3
CNOT9-201ENST00000273064 HERV-K104P61576 105 aa13.18□□□□□ -0.3
CNOT9-201ENST00000273064 RBMS2Q15434 407 aaKnown RBP13.18□□□□□ -0.3
CNOT9-201ENST00000273064 ABHD17BQ5VST6 288 aa13.18□□□□□ -0.3
CNOT9-201ENST00000273064 CMIPQ8IY22 773 aa13.18□□□□□ -0.3
CNOT9-201ENST00000273064 ZNF679Q8IYX0 411 aa13.18□□□□□ -0.3
CNOT9-201ENST00000273064 RELL2Q8NC24 303 aaPredicted RBP13.18□□□□□ -0.3
CNOT9-201ENST00000273064 KIAA1143Q96AT1 154 aaPredicted RBP13.18□□□□□ -0.3
CNOT9-201ENST00000273064 MENTQ9BUN1 341 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms