RNA–Protein interactions for RNA: ENST00000264828.3

COL5A3-201, Transcript of collagen type V alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL5A3, Length 6,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A3-201ENST00000264828 TMEM123Q8N131 208 aa16.48■□□□□ 0.23
COL5A3-201ENST00000264828 ZFP62Q8NB50 900 aaPredicted RBP16.48■□□□□ 0.23
COL5A3-201ENST00000264828 HLA-CQ95604 372 aa16.48■□□□□ 0.23
COL5A3-201ENST00000264828 SLC25A21Q9BQT8 299 aaPredicted RBP16.48■□□□□ 0.23
COL5A3-201ENST00000264828 LANCL2Q9NS86 450 aa16.48■□□□□ 0.23
COL5A3-201ENST00000264828 TMEM200CA6NKL6 621 aa16.48■□□□□ 0.23
COL5A3-201ENST00000264828 SEC14L6B5MCN3 397 aa16.48■□□□□ 0.23
COL5A3-201ENST00000264828 RBPJQ06330 500 aa16.48■□□□□ 0.23
COL5A3-201ENST00000264828 OR13C5Q8NGS8 318 aa16.48■□□□□ 0.23
COL5A3-201ENST00000264828 FAM173AQ9BQD7 235 aa16.48■□□□□ 0.23
COL5A3-201ENST00000264828 ZCCHC4Q9H5U6 513 aa16.48■□□□□ 0.23
COL5A3-201ENST00000264828 CDCP1Q9H5V8 836 aa16.48■□□□□ 0.23
COL5A3-201ENST00000264828 SPACA1Q9HBV2 294 aa16.48■□□□□ 0.23
COL5A3-201ENST00000264828 FBXO8Q9NRD0 319 aa16.48■□□□□ 0.23
COL5A3-201ENST00000264828 DUSP5Q16690 384 aa16.48■□□□□ 0.23
COL5A3-201ENST00000264828 AGBL5Q8NDL9 886 aa16.48■□□□□ 0.23
COL5A3-201ENST00000264828 SEMA6DQ8NFY4 1073 aa16.48■□□□□ 0.23
COL5A3-201ENST00000264828 LGALS8O00214 317 aa16.48■□□□□ 0.23
COL5A3-201ENST00000264828 TBC1D28Q2M2D7 210 aa16.48■□□□□ 0.23
COL5A3-201ENST00000264828 C9orf152Q5JTZ5 239 aa16.48■□□□□ 0.23
COL5A3-201ENST00000264828 TEAD3Q99594 435 aa16.48■□□□□ 0.23
COL5A3-201ENST00000264828 FBXL4Q9UKA2 621 aa16.48■□□□□ 0.23
COL5A3-201ENST00000264828 A0A0B4J203 849 aa16.47■□□□□ 0.23
COL5A3-201ENST00000264828 DFFBO76075 338 aa16.47■□□□□ 0.23
COL5A3-201ENST00000264828 H2AFB1P0C5Y9 115 aa16.47■□□□□ 0.23
COL5A3-201ENST00000264828 OR1D5P58170 312 aa16.47■□□□□ 0.23
COL5A3-201ENST00000264828 ZNF239Q16600 458 aaKnown RBP16.47■□□□□ 0.23
COL5A3-201ENST00000264828 PRSS35Q8N3Z0 413 aa16.47■□□□□ 0.23
COL5A3-201ENST00000264828 SLC35A4Q96G79 324 aa16.47■□□□□ 0.23
COL5A3-201ENST00000264828 FLVCR2Q9UPI3 526 aa16.47■□□□□ 0.23
COL5A3-201ENST00000264828 HRO43593 1189 aa16.47■□□□□ 0.23
COL5A3-201ENST00000264828 SLC19A1P41440 591 aa16.47■□□□□ 0.23
COL5A3-201ENST00000264828 IHHQ14623 411 aa16.47■□□□□ 0.23
COL5A3-201ENST00000264828 TRMT12Q53H54 448 aaKnown RBP16.47■□□□□ 0.23
COL5A3-201ENST00000264828 OR51E1Q8TCB6 317 aa16.47■□□□□ 0.23
COL5A3-201ENST00000264828 ZNF2Q9BSG1 426 aaPredicted RBP16.47■□□□□ 0.23
COL5A3-201ENST00000264828 SHARPINQ9H0F6 387 aa16.47■□□□□ 0.23
COL5A3-201ENST00000264828 PRAMEF25A6NGN4 478 aa16.47■□□□□ 0.23
COL5A3-201ENST00000264828 DUSP1P28562 367 aa16.47■□□□□ 0.23
COL5A3-201ENST00000264828 YPEL5P62699 121 aa16.47■□□□□ 0.23
COL5A3-201ENST00000264828 ANKRD34AQ69YU3 496 aa16.47■□□□□ 0.23
COL5A3-201ENST00000264828 CORO6Q6QEF8 472 aa16.47■□□□□ 0.23
COL5A3-201ENST00000264828 PLEKHF2Q9H8W4 249 aa16.47■□□□□ 0.23
COL5A3-201ENST00000264828 UMAD1C9J7I0 102 aa16.47■□□□□ 0.23
COL5A3-201ENST00000264828 SSSCA1O60232 199 aa16.47■□□□□ 0.23
COL5A3-201ENST00000264828 CNIH1O95406 144 aa16.47■□□□□ 0.23
COL5A3-201ENST00000264828 NKX2-1P43699 371 aaPredicted RBP16.47■□□□□ 0.23
COL5A3-201ENST00000264828 AGFG1P52594 562 aaKnown RBP16.47■□□□□ 0.23
COL5A3-201ENST00000264828 ASTLQ6HA08 431 aaPredicted RBP16.47■□□□□ 0.23
COL5A3-201ENST00000264828 DLEU7Q6UYE1 221 aa16.47■□□□□ 0.23
COL5A3-201ENST00000264828 OR6K3Q8NGY3 331 aa16.47■□□□□ 0.23
COL5A3-201ENST00000264828 ZBP1Q9H171 429 aa16.47■□□□□ 0.23
COL5A3-201ENST00000264828 PIGMQ9H3S5 423 aa16.47■□□□□ 0.23
COL5A3-201ENST00000264828 C1QBP02746 253 aa16.47■□□□□ 0.23
COL5A3-201ENST00000264828 OR10A3P58181 314 aa16.47■□□□□ 0.23
COL5A3-201ENST00000264828 RPL27P61353 136 aaKnown RBP16.47■□□□□ 0.23
COL5A3-201ENST00000264828 BTF3L4Q96K17 158 aa16.47■□□□□ 0.23
COL5A3-201ENST00000264828 ZNF331Q9NQX6 463 aaPredicted RBP16.47■□□□□ 0.23
COL5A3-201ENST00000264828 SPHK1Q9NYA1 384 aa16.47■□□□□ 0.23
COL5A3-201ENST00000264828 SERTM2A0A1B0GWG4 89 aa16.46■□□□□ 0.23
COL5A3-201ENST00000264828 K7ESM1 405 aa16.46■□□□□ 0.23
COL5A3-201ENST00000264828 GUSBP08236 651 aa16.46■□□□□ 0.23
COL5A3-201ENST00000264828 BTG1P62324 171 aa16.46■□□□□ 0.23
COL5A3-201ENST00000264828 ZNF626Q68DY1 528 aa16.46■□□□□ 0.23
COL5A3-201ENST00000264828 CDH26Q8IXH8 852 aa16.46■□□□□ 0.23
COL5A3-201ENST00000264828 GJC3Q8NFK1 279 aa16.46■□□□□ 0.23
COL5A3-201ENST00000264828 CLCF1Q9UBD9 225 aa16.46■□□□□ 0.23
COL5A3-201ENST00000264828 ZNF749O43361 778 aa16.46■□□□□ 0.23
COL5A3-201ENST00000264828 GPX5O75715 221 aa16.46■□□□□ 0.23
COL5A3-201ENST00000264828 SLCO2B1O94956 709 aa16.46■□□□□ 0.23
COL5A3-201ENST00000264828 MYOGP15173 224 aa16.46■□□□□ 0.23
COL5A3-201ENST00000264828 THNSL2Q86YJ6 484 aa16.46■□□□□ 0.23
COL5A3-201ENST00000264828 C1QTNF6Q9BXI9 259 aa16.46■□□□□ 0.23
COL5A3-201ENST00000264828 B3GAT1Q9P2W7 334 aa16.46■□□□□ 0.23
COL5A3-201ENST00000264828 B3GALT5Q9Y2C3 310 aa16.46■□□□□ 0.23
COL5A3-201ENST00000264828 LOC107986453A0A1B0GWG9 222 aa16.46■□□□□ 0.23
COL5A3-201ENST00000264828 CYTIPO60759 359 aa16.46■□□□□ 0.23
COL5A3-201ENST00000264828 RFX2P48378 723 aa16.46■□□□□ 0.23
COL5A3-201ENST00000264828 PADI1Q9ULC6 663 aa16.46■□□□□ 0.23
COL5A3-201ENST00000264828 KPTNQ9Y664 436 aa16.46■□□□□ 0.23
COL5A3-201ENST00000264828 EIF1BO60739 113 aaKnown RBP16.46■□□□□ 0.23
COL5A3-201ENST00000264828 SULT1C4O75897 302 aa16.46■□□□□ 0.23
COL5A3-201ENST00000264828 MTHFD2P13995 350 aa16.46■□□□□ 0.23
COL5A3-201ENST00000264828 CPEP16870 476 aa16.46■□□□□ 0.23
COL5A3-201ENST00000264828 CCL11P51671 97 aa16.46■□□□□ 0.23
COL5A3-201ENST00000264828 EPHA5P54756 1037 aa16.46■□□□□ 0.23
COL5A3-201ENST00000264828 H1FNTQ75WM6 255 aaPredicted RBP16.46■□□□□ 0.23
COL5A3-201ENST00000264828 GDPD3Q7L5L3 318 aa16.46■□□□□ 0.23
COL5A3-201ENST00000264828 BPIFCQ8NFQ6 507 aa16.46■□□□□ 0.23
COL5A3-201ENST00000264828 WFDC5Q8TCV5 224 aa16.46■□□□□ 0.23
COL5A3-201ENST00000264828 BARHL1Q9BZE3 327 aa16.46■□□□□ 0.23
COL5A3-201ENST00000264828 MN1Q10571 1320 aaPredicted RBP16.46■□□□□ 0.23
COL5A3-201ENST00000264828 GIPP09681 153 aaPredicted RBP16.46■□□□□ 0.22
COL5A3-201ENST00000264828 GPX2P18283 190 aa16.46■□□□□ 0.22
COL5A3-201ENST00000264828 MRPS21P82921 87 aaKnown RBP16.46■□□□□ 0.22
COL5A3-201ENST00000264828 CACNA1SQ13698 1873 aa16.46■□□□□ 0.22
COL5A3-201ENST00000264828 OR6C68A6NDL8 312 aa16.45■□□□□ 0.22
COL5A3-201ENST00000264828 CTNSO60931 367 aa16.45■□□□□ 0.22
COL5A3-201ENST00000264828 ISL1P61371 349 aa16.45■□□□□ 0.22
COL5A3-201ENST00000264828 UBE2G1P62253 170 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms