RNA–Protein interactions for RNA: ENST00000263856.8

CHMP3-201, Transcript of charged multivesicular body protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP3, Length 3,171 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-201ENST00000263856 ZNF275Q9NSD4 429 aaPredicted RBP11.18□□□□□ -0.62
CHMP3-201ENST00000263856 TMEM184BQ9Y519 407 aaPredicted RBP11.18□□□□□ -0.62
CHMP3-201ENST00000263856 TMEM14AQ9Y6G1 99 aa11.18□□□□□ -0.62
CHMP3-201ENST00000263856 TCRBV21S2A2A0A5A6 115 aa11.18□□□□□ -0.62
CHMP3-201ENST00000263856 RFPL4AA6NLU0 287 aa11.18□□□□□ -0.62
CHMP3-201ENST00000263856 DISC1C4P0D8 188 aa11.18□□□□□ -0.62
CHMP3-201ENST00000263856 RFPL4AL1F8VTS6 287 aa11.18□□□□□ -0.62
CHMP3-201ENST00000263856 IL12BP29460 328 aa11.18□□□□□ -0.62
CHMP3-201ENST00000263856 GPR3P46089 330 aa11.18□□□□□ -0.62
CHMP3-201ENST00000263856 ZP2Q05996 745 aa11.18□□□□□ -0.62
CHMP3-201ENST00000263856 UBXN2BQ14CS0 331 aa11.18□□□□□ -0.62
CHMP3-201ENST00000263856 ACKR1Q16570 336 aa11.18□□□□□ -0.62
CHMP3-201ENST00000263856 C7orf61Q8IZ16 206 aa11.18□□□□□ -0.62
CHMP3-201ENST00000263856 CLEC1AQ8NC01 280 aa11.18□□□□□ -0.62
CHMP3-201ENST00000263856 OTOSQ8NHW6 89 aa11.18□□□□□ -0.62
CHMP3-201ENST00000263856 PPP1R1CQ8WVI7 109 aa11.18□□□□□ -0.62
CHMP3-201ENST00000263856 TGM7Q96PF1 710 aa11.18□□□□□ -0.62
CHMP3-201ENST00000263856 TSNAXQ99598 290 aaKnown RBP11.18□□□□□ -0.62
CHMP3-201ENST00000263856 ZNF416Q9BWM5 594 aa11.18□□□□□ -0.62
CHMP3-201ENST00000263856 PCDHB16Q9NRJ7 776 aa11.18□□□□□ -0.62
CHMP3-201ENST00000263856 MRPS18BQ9Y676 258 aaKnown RBP11.18□□□□□ -0.62
CHMP3-201ENST00000263856 A0A1B0GW55 424 aa11.17□□□□□ -0.62
CHMP3-201ENST00000263856 FOXS1O43638 330 aa11.17□□□□□ -0.62
CHMP3-201ENST00000263856 CD1AP06126 327 aa11.17□□□□□ -0.62
CHMP3-201ENST00000263856 DUX4L2P0CJ85 424 aa11.17□□□□□ -0.62
CHMP3-201ENST00000263856 DUX4L3P0CJ86 424 aa11.17□□□□□ -0.62
CHMP3-201ENST00000263856 DUX4L4P0CJ87 422 aa11.17□□□□□ -0.62
CHMP3-201ENST00000263856 DUX4L5P0CJ88 424 aa11.17□□□□□ -0.62
CHMP3-201ENST00000263856 DUX4L6P0CJ89 424 aa11.17□□□□□ -0.62
CHMP3-201ENST00000263856 DUX4L7P0CJ90 424 aa11.17□□□□□ -0.62
CHMP3-201ENST00000263856 NR0B1P51843 470 aaKnown RBP11.17□□□□□ -0.62
CHMP3-201ENST00000263856 RIDAP52758 137 aaKnown RBP11.17□□□□□ -0.62
CHMP3-201ENST00000263856 SLC17A1Q14916 467 aa11.17□□□□□ -0.62
CHMP3-201ENST00000263856 TMEM225Q6GV28 225 aa11.17□□□□□ -0.62
CHMP3-201ENST00000263856 SHISA6Q6ZSJ9 500 aa11.17□□□□□ -0.62
CHMP3-201ENST00000263856 ZNF595Q8IYB9 648 aa11.17□□□□□ -0.62
CHMP3-201ENST00000263856 SLC43A2Q8N370 569 aa11.17□□□□□ -0.62
CHMP3-201ENST00000263856 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.17□□□□□ -0.62
CHMP3-201ENST00000263856 SEH1LQ96EE3 360 aa11.17□□□□□ -0.62
CHMP3-201ENST00000263856 SCARF2Q96GP6 870 aaPredicted RBP11.17□□□□□ -0.62
CHMP3-201ENST00000263856 SLC41A2Q96JW4 573 aa11.17□□□□□ -0.62
CHMP3-201ENST00000263856 DUX4Q9UBX2 424 aa11.17□□□□□ -0.62
CHMP3-201ENST00000263856 NPIPB9F8W1W9 429 aa11.17□□□□□ -0.62
CHMP3-201ENST00000263856 GPR31O00270 319 aa11.17□□□□□ -0.62
CHMP3-201ENST00000263856 SLC17A2O00624 439 aa11.17□□□□□ -0.62
CHMP3-201ENST00000263856 F12P00748 615 aaPredicted RBP11.17□□□□□ -0.62
CHMP3-201ENST00000263856 CTLA4P16410 223 aa11.17□□□□□ -0.62
CHMP3-201ENST00000263856 MPGP29372 298 aa11.17□□□□□ -0.62
CHMP3-201ENST00000263856 SLC25A1P53007 311 aa11.17□□□□□ -0.62
CHMP3-201ENST00000263856 GFOD2Q3B7J2 385 aa11.17□□□□□ -0.62
CHMP3-201ENST00000263856 ATPAF1Q5TC12 328 aaPredicted RBP11.17□□□□□ -0.62
CHMP3-201ENST00000263856 SLC18B1Q6NT16 456 aa11.17□□□□□ -0.62
CHMP3-201ENST00000263856 TTLL10Q6ZVT0 673 aa11.17□□□□□ -0.62
CHMP3-201ENST00000263856 NAXDQ8IW45 347 aa11.17□□□□□ -0.62
CHMP3-201ENST00000263856 ARMC10Q8N2F6 343 aa11.17□□□□□ -0.62
CHMP3-201ENST00000263856 ESX1Q8N693 406 aa11.17□□□□□ -0.62
CHMP3-201ENST00000263856 SP7Q8TDD2 431 aaPredicted RBP11.17□□□□□ -0.62
CHMP3-201ENST00000263856 GPR119Q8TDV5 335 aa11.17□□□□□ -0.62
CHMP3-201ENST00000263856 PAQR8Q8TEZ7 354 aa11.17□□□□□ -0.62
CHMP3-201ENST00000263856 THAP3Q8WTV1 239 aaPredicted RBP11.17□□□□□ -0.62
CHMP3-201ENST00000263856 CPNE2Q96FN4 548 aaPredicted RBP11.17□□□□□ -0.62
CHMP3-201ENST00000263856 ZNF578Q96N58 590 aaPredicted RBP11.17□□□□□ -0.62
CHMP3-201ENST00000263856 TBL1XR1Q9BZK7 514 aa11.17□□□□□ -0.62
CHMP3-201ENST00000263856 LDAHQ9H6V9 325 aa11.17□□□□□ -0.62
CHMP3-201ENST00000263856 PRR13Q9NZ81 148 aa11.17□□□□□ -0.62
CHMP3-201ENST00000263856 COA3Q9Y2R0 106 aaPredicted RBP11.17□□□□□ -0.62
CHMP3-201ENST00000263856 P2RY10O00398 339 aa11.16□□□□□ -0.62
CHMP3-201ENST00000263856 FADS1O60427 444 aa11.16□□□□□ -0.62
CHMP3-201ENST00000263856 ZNF432O94892 652 aa11.16□□□□□ -0.62
CHMP3-201ENST00000263856 HPP00738 406 aa11.16□□□□□ -0.62
CHMP3-201ENST00000263856 PRKXP51817 358 aa11.16□□□□□ -0.62
CHMP3-201ENST00000263856 UBE2IP63279 158 aaKnown RBP11.16□□□□□ -0.62
CHMP3-201ENST00000263856 FMODQ06828 376 aa11.16□□□□□ -0.62
CHMP3-201ENST00000263856 PMPCAQ10713 525 aa11.16□□□□□ -0.62
CHMP3-201ENST00000263856 BAMBIQ13145 260 aa11.16□□□□□ -0.62
CHMP3-201ENST00000263856 RNASE10Q5GAN6 216 aaKnown RBP11.16□□□□□ -0.62
CHMP3-201ENST00000263856 LY6G6FQ5SQ64 297 aa11.16□□□□□ -0.62
CHMP3-201ENST00000263856 FOXRED2Q8IWF2 684 aa11.16□□□□□ -0.62
CHMP3-201ENST00000263856 SLC22A18ASQ8N1D0 253 aa11.16□□□□□ -0.62
CHMP3-201ENST00000263856 PMM1Q92871 262 aa11.16□□□□□ -0.62
CHMP3-201ENST00000263856 ELSPBP1Q96BH3 223 aa11.16□□□□□ -0.62
CHMP3-201ENST00000263856 OR2S2Q9NQN1 319 aa11.16□□□□□ -0.62
CHMP3-201ENST00000263856 TRBV5-7A0A0A0MS05 114 aa11.16□□□□□ -0.62
CHMP3-201ENST00000263856 LOC101059948A0A1B0GTJ6 334 aa11.16□□□□□ -0.62
CHMP3-201ENST00000263856 OR6C65A6NJZ3 312 aa11.16□□□□□ -0.62
CHMP3-201ENST00000263856 BET1O15155 118 aa11.16□□□□□ -0.62
CHMP3-201ENST00000263856 PMS2P2O95744 297 aa11.16□□□□□ -0.62
CHMP3-201ENST00000263856 OPN1LWP04000 364 aa11.16□□□□□ -0.62
CHMP3-201ENST00000263856 ASAH2BP0C7U1 165 aa11.16□□□□□ -0.62
CHMP3-201ENST00000263856 CSF2RBP32927 897 aa11.16□□□□□ -0.62
CHMP3-201ENST00000263856 IL13RA1P78552 427 aa11.16□□□□□ -0.62
CHMP3-201ENST00000263856 ZNF117Q03924 483 aa11.16□□□□□ -0.62
CHMP3-201ENST00000263856 SKP2Q13309 424 aa11.16□□□□□ -0.62
CHMP3-201ENST00000263856 IKZF1Q13422 519 aa11.16□□□□□ -0.62
CHMP3-201ENST00000263856 EEF1A1P5Q5VTE0 462 aa11.16□□□□□ -0.62
CHMP3-201ENST00000263856 HLA-DQA1Q5Y7H0 255 aa11.16□□□□□ -0.62
CHMP3-201ENST00000263856 TMEM92Q6UXU6 159 aa11.16□□□□□ -0.62
CHMP3-201ENST00000263856 RTN4RL2Q86UN3 420 aa11.16□□□□□ -0.62
CHMP3-201ENST00000263856 OR8B4Q96RC9 309 aa11.16□□□□□ -0.62
CHMP3-201ENST00000263856 DHCR7Q9UBM7 475 aaKnown RBP11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms