RNA–Protein interactions for RNA: ENST00000263398.10

CD44-201, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 4,589 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-201ENST00000263398 PCDHGA5Q9Y5G8 931 aa9.82□□□□□ -0.84
CD44-201ENST00000263398 SEC16AO15027 2179 aa9.82□□□□□ -0.84
CD44-201ENST00000263398 RP1P56715 2156 aa9.82□□□□□ -0.84
CD44-201ENST00000263398 AGAP14A8MT82 685 aa9.82□□□□□ -0.84
CD44-201ENST00000263398 RFX2P48378 723 aa9.82□□□□□ -0.84
CD44-201ENST00000263398 OR1D5P58170 312 aa9.82□□□□□ -0.84
CD44-201ENST00000263398 TMEM240Q5SV17 173 aa9.82□□□□□ -0.84
CD44-201ENST00000263398 MAML2Q8IZL2 1156 aaPredicted RBP9.82□□□□□ -0.84
CD44-201ENST00000263398 ANKRD9Q96BM1 317 aaPredicted RBP9.82□□□□□ -0.84
CD44-201ENST00000263398 SLIRPQ9GZT3 109 aaKnown RBP9.82□□□□□ -0.84
CD44-201ENST00000263398 POFUT1Q9H488 388 aa9.82□□□□□ -0.84
CD44-201ENST00000263398 CHST11Q9NPF2 352 aa9.82□□□□□ -0.84
CD44-201ENST00000263398 TAS2R4Q9NYW5 299 aa9.82□□□□□ -0.84
CD44-201ENST00000263398 B3GALT5Q9Y2C3 310 aa9.82□□□□□ -0.84
CD44-201ENST00000263398 TAF1LQ8IZX4 1826 aa9.82□□□□□ -0.84
CD44-201ENST00000263398 C2orf72A6NCS6 295 aa9.82□□□□□ -0.84
CD44-201ENST00000263398 CEACAM5P06731 702 aa9.82□□□□□ -0.84
CD44-201ENST00000263398 MSL3P1P0C860 447 aa9.82□□□□□ -0.84
CD44-201ENST00000263398 KITLGP21583 273 aa9.82□□□□□ -0.84
CD44-201ENST00000263398 SOX18P35713 384 aa9.82□□□□□ -0.84
CD44-201ENST00000263398 EGR3Q06889 387 aa9.82□□□□□ -0.84
CD44-201ENST00000263398 PLGLAQ15195 96 aa9.82□□□□□ -0.84
CD44-201ENST00000263398 CA13Q8N1Q1 262 aa9.82□□□□□ -0.84
CD44-201ENST00000263398 ZNF610Q8N9Z0 462 aa9.82□□□□□ -0.84
CD44-201ENST00000263398 MVB12AQ96EY5 273 aa9.82□□□□□ -0.84
CD44-201ENST00000263398 MOB1AQ9H8S9 216 aa9.82□□□□□ -0.84
CD44-201ENST00000263398 H0YIG0 161 aa9.82□□□□□ -0.84
CD44-201ENST00000263398 SHOXO15266 292 aa9.82□□□□□ -0.84
CD44-201ENST00000263398 YKT6O15498 198 aa9.82□□□□□ -0.84
CD44-201ENST00000263398 TMEM127O75204 238 aa9.82□□□□□ -0.84
CD44-201ENST00000263398 OR2F2O95006 317 aa9.82□□□□□ -0.84
CD44-201ENST00000263398 MYOGP15173 224 aa9.82□□□□□ -0.84
CD44-201ENST00000263398 OR2F1Q13607 317 aa9.82□□□□□ -0.84
CD44-201ENST00000263398 BAK1Q16611 211 aa9.82□□□□□ -0.84
CD44-201ENST00000263398 KANSL1Q7Z3B3 1105 aa9.82□□□□□ -0.84
CD44-201ENST00000263398 CCDC190Q86UF4 302 aa9.82□□□□□ -0.84
CD44-201ENST00000263398 CMTM4Q8IZR5 234 aa9.82□□□□□ -0.84
CD44-201ENST00000263398 GABRG1Q8N1C3 465 aa9.82□□□□□ -0.84
CD44-201ENST00000263398 ST7LQ8TDW4 575 aa9.82□□□□□ -0.84
CD44-201ENST00000263398 ZNF416Q9BWM5 594 aa9.82□□□□□ -0.84
CD44-201ENST00000263398 BCO1Q9HAY6 547 aa9.82□□□□□ -0.84
CD44-201ENST00000263398 NECAP2Q9NVZ3 263 aa9.82□□□□□ -0.84
CD44-201ENST00000263398 GNG12Q9UBI6 72 aa9.82□□□□□ -0.84
CD44-201ENST00000263398 TPRP12270 2363 aaKnown RBP9.81□□□□□ -0.84
CD44-201ENST00000263398 TRIM64BA6NI03 449 aa9.81□□□□□ -0.84
CD44-201ENST00000263398 SGCEO43556 437 aa9.81□□□□□ -0.84
CD44-201ENST00000263398 APEHP13798 732 aaKnown RBP9.81□□□□□ -0.84
CD44-201ENST00000263398 CCR2P41597 374 aa9.81□□□□□ -0.84
CD44-201ENST00000263398 RUNX2Q13950 521 aa9.81□□□□□ -0.84
CD44-201ENST00000263398 EXT1Q16394 746 aa9.81□□□□□ -0.84
CD44-201ENST00000263398 HIST2H3PS2Q5TEC6 136 aa9.81□□□□□ -0.84
CD44-201ENST00000263398 XAF1Q6GPH4 301 aa9.81□□□□□ -0.84
CD44-201ENST00000263398 RHOUQ7L0Q8 258 aa9.81□□□□□ -0.84
CD44-201ENST00000263398 OR1M1Q8NGA1 313 aa9.81□□□□□ -0.84
CD44-201ENST00000263398 OR1J2Q8NGS2 313 aa9.81□□□□□ -0.84
CD44-201ENST00000263398 TEX101Q9BY14 249 aa9.81□□□□□ -0.84
CD44-201ENST00000263398 GPATCH2Q9NW75 528 aa9.81□□□□□ -0.84
CD44-201ENST00000263398 ZNF223Q9UK11 482 aaPredicted RBP9.81□□□□□ -0.84
CD44-201ENST00000263398 MCM3APO60318 1980 aa9.81□□□□□ -0.84
CD44-201ENST00000263398 ZNF587BE7ETH6 402 aa9.81□□□□□ -0.84
CD44-201ENST00000263398 RAB5CP51148 216 aa9.81□□□□□ -0.84
CD44-201ENST00000263398 OR10A3P58181 314 aa9.81□□□□□ -0.84
CD44-201ENST00000263398 FAM53BQ14153 422 aa9.81□□□□□ -0.84
CD44-201ENST00000263398 CLINT1Q14677 625 aa9.81□□□□□ -0.84
CD44-201ENST00000263398 ATPAF1Q5TC12 328 aaPredicted RBP9.81□□□□□ -0.84
CD44-201ENST00000263398 C12orf73Q69YU5 71 aa9.81□□□□□ -0.84
CD44-201ENST00000263398 ANKRD53Q8N9V6 530 aa9.81□□□□□ -0.84
CD44-201ENST00000263398 CCL4L1Q8NHW4 92 aa9.81□□□□□ -0.84
CD44-201ENST00000263398 BORCS7Q96B45 105 aa9.81□□□□□ -0.84
CD44-201ENST00000263398 MUCL1Q96DR8 90 aa9.81□□□□□ -0.84
CD44-201ENST00000263398 KIRREL1Q96J84 757 aa9.81□□□□□ -0.84
CD44-201ENST00000263398 BANF2Q9H503 90 aa9.81□□□□□ -0.84
CD44-201ENST00000263398 HRASLSQ9HDD0 168 aa9.81□□□□□ -0.84
CD44-201ENST00000263398 SERTAD4Q9NUC0 356 aa9.81□□□□□ -0.84
CD44-201ENST00000263398 IL20Q9NYY1 176 aa9.81□□□□□ -0.84
CD44-201ENST00000263398 PIGLQ9Y2B2 252 aa9.81□□□□□ -0.84
CD44-201ENST00000263398 PPIL1Q9Y3C6 166 aa9.81□□□□□ -0.84
CD44-201ENST00000263398 IGHV3-20A0A0C4DH32 117 aa9.81□□□□□ -0.84
CD44-201ENST00000263398 TMEM235A6NFC5 223 aa9.81□□□□□ -0.84
CD44-201ENST00000263398 IDSB3KWA1 339 aa9.81□□□□□ -0.84
CD44-201ENST00000263398 STMND1H3BQB6 276 aa9.81□□□□□ -0.84
CD44-201ENST00000263398 MAGEB4O15481 346 aaPredicted RBP9.81□□□□□ -0.84
CD44-201ENST00000263398 LY75O60449 1722 aa9.81□□□□□ -0.84
CD44-201ENST00000263398 EIF4EP06730 217 aaKnown RBP9.81□□□□□ -0.84
CD44-201ENST00000263398 F2RL1P55085 397 aa9.81□□□□□ -0.84
CD44-201ENST00000263398 PRTGQ2VWP7 1150 aa9.81□□□□□ -0.84
CD44-201ENST00000263398 RNLSQ5VYX0 342 aa9.81□□□□□ -0.84
CD44-201ENST00000263398 SHEQ5VZ18 495 aa9.81□□□□□ -0.84
CD44-201ENST00000263398 OR13C5Q8NGS8 318 aa9.81□□□□□ -0.84
CD44-201ENST00000263398 ST8SIA1Q92185 356 aa9.81□□□□□ -0.84
CD44-201ENST00000263398 SLAMF6Q96DU3 332 aa9.81□□□□□ -0.84
CD44-201ENST00000263398 SIRT5Q9NXA8 310 aa9.81□□□□□ -0.84
CD44-201ENST00000263398 HAO2Q9NYQ3 351 aa9.81□□□□□ -0.84
CD44-201ENST00000263398 TAS2R5Q9NYW4 299 aa9.81□□□□□ -0.84
CD44-201ENST00000263398 A0A0A6YYD5 115 aa9.8□□□□□ -0.84
CD44-201ENST00000263398 A0A0A6YYJ9 748 aa9.8□□□□□ -0.84
CD44-201ENST00000263398 ANKRD61A6NGH8 418 aa9.8□□□□□ -0.84
CD44-201ENST00000263398 HSPB6O14558 160 aa9.8□□□□□ -0.84
CD44-201ENST00000263398 EN2P19622 333 aaPredicted RBP9.8□□□□□ -0.84
CD44-201ENST00000263398 BTG2P78543 158 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms