RNA–Protein interactions for RNA: ENST00000263388.6

NOTCH3-201, Transcript of notch 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOTCH3, Length 8,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3-201ENST00000263388 LGI1O95970 557 aa16.06■□□□□ 0.16
NOTCH3-201ENST00000263388 TESK1Q15569 626 aa16.06■□□□□ 0.16
NOTCH3-201ENST00000263388 YOD1Q5VVQ6 348 aaPredicted RBP16.06■□□□□ 0.16
NOTCH3-201ENST00000263388 TBPL2Q6SJ96 375 aa16.06■□□□□ 0.16
NOTCH3-201ENST00000263388 SFT2D1Q8WV19 159 aa16.06■□□□□ 0.16
NOTCH3-201ENST00000263388 NIPSNAP1Q9BPW8 284 aa16.06■□□□□ 0.16
NOTCH3-201ENST00000263388 TM7SF3Q9NS93 570 aa16.06■□□□□ 0.16
NOTCH3-201ENST00000263388 ARID2Q68CP9 1835 aa16.06■□□□□ 0.16
NOTCH3-201ENST00000263388 CHD3Q12873 2000 aaKnown RBP16.06■□□□□ 0.16
NOTCH3-201ENST00000263388 GIPP09681 153 aaPredicted RBP16.06■□□□□ 0.16
NOTCH3-201ENST00000263388 MAT1AQ00266 395 aaKnown RBP16.06■□□□□ 0.16
NOTCH3-201ENST00000263388 OVCH1Q7RTY7 1134 aa16.06■□□□□ 0.16
NOTCH3-201ENST00000263388 MAVSQ7Z434 540 aa16.06■□□□□ 0.16
NOTCH3-201ENST00000263388 POMT1Q9Y6A1 747 aa16.06■□□□□ 0.16
NOTCH3-201ENST00000263388 H2BFWTQ7Z2G1 175 aa16.06■□□□□ 0.16
NOTCH3-201ENST00000263388 RNF150Q9ULK6 438 aa16.06■□□□□ 0.16
NOTCH3-201ENST00000263388 ZNF732B4DXR9 585 aa16.05■□□□□ 0.16
NOTCH3-201ENST00000263388 CTXN2P0C2S0 81 aa16.05■□□□□ 0.16
NOTCH3-201ENST00000263388 GPX2P18283 190 aa16.05■□□□□ 0.16
NOTCH3-201ENST00000263388 SUB1P53999 127 aaKnown RBP eCLIP16.05■□□□□ 0.16
NOTCH3-201ENST00000263388 HSF5Q4G112 596 aaPredicted RBP16.05■□□□□ 0.16
NOTCH3-201ENST00000263388 DCXRQ7Z4W1 244 aa16.05■□□□□ 0.16
NOTCH3-201ENST00000263388 SOX7Q9BT81 388 aa16.05■□□□□ 0.16
NOTCH3-201ENST00000263388 OSGIN2Q9Y236 505 aa16.05■□□□□ 0.16
NOTCH3-201ENST00000263388 XKRY2A2RUG3 117 aa16.05■□□□□ 0.16
NOTCH3-201ENST00000263388 FCER1GP30273 86 aa16.05■□□□□ 0.16
NOTCH3-201ENST00000263388 MAP2K6P52564 334 aa16.05■□□□□ 0.16
NOTCH3-201ENST00000263388 TFAP2EQ6VUC0 442 aa16.05■□□□□ 0.16
NOTCH3-201ENST00000263388 TAS1R1Q7RTX1 841 aa16.05■□□□□ 0.16
NOTCH3-201ENST00000263388 LGI3Q8N145 548 aa16.05■□□□□ 0.16
NOTCH3-201ENST00000263388 PELI3Q8N2H9 469 aa16.05■□□□□ 0.16
NOTCH3-201ENST00000263388 ZBTB32Q9Y2Y4 487 aaPredicted RBP16.05■□□□□ 0.16
NOTCH3-201ENST00000263388 CRYM-AS1A6NIL9 109 aa16.05■□□□□ 0.16
NOTCH3-201ENST00000263388 HSD17B6O14756 317 aa16.05■□□□□ 0.16
NOTCH3-201ENST00000263388 TRAPPC2P0DI81 140 aa16.05■□□□□ 0.16
NOTCH3-201ENST00000263388 TRAPPC2BP0DI82 140 aa16.05■□□□□ 0.16
NOTCH3-201ENST00000263388 FAM78AQ5JUQ0 283 aa16.05■□□□□ 0.16
NOTCH3-201ENST00000263388 RIMS4Q9H426 269 aaPredicted RBP16.05■□□□□ 0.16
NOTCH3-201ENST00000263388 SMLR1H3BR10 107 aa16.05■□□□□ 0.16
NOTCH3-201ENST00000263388 GPR171O14626 319 aa16.05■□□□□ 0.16
NOTCH3-201ENST00000263388 CNMDO75829 334 aa16.05■□□□□ 0.16
NOTCH3-201ENST00000263388 OR2F2O95006 317 aa16.05■□□□□ 0.16
NOTCH3-201ENST00000263388 TPMTP51580 245 aa16.05■□□□□ 0.16
NOTCH3-201ENST00000263388 OR2F1Q13607 317 aa16.05■□□□□ 0.16
NOTCH3-201ENST00000263388 SYT14P1Q58G82 188 aa16.05■□□□□ 0.16
NOTCH3-201ENST00000263388 PLPP6Q8IY26 295 aa16.05■□□□□ 0.16
NOTCH3-201ENST00000263388 OR5M11Q96RB7 305 aa16.05■□□□□ 0.16
NOTCH3-201ENST00000263388 KIR2DS1A0A191URI9 304 aa16.05■□□□□ 0.16
NOTCH3-201ENST00000263388 I6L893 689 aaPredicted RBP16.05■□□□□ 0.16
NOTCH3-201ENST00000263388 KIR2DS4P43632 304 aa16.05■□□□□ 0.16
NOTCH3-201ENST00000263388 IHHQ14623 411 aa16.05■□□□□ 0.16
NOTCH3-201ENST00000263388 KIR2DS1Q14954 304 aa16.05■□□□□ 0.16
NOTCH3-201ENST00000263388 H1FNTQ75WM6 255 aaPredicted RBP16.05■□□□□ 0.16
NOTCH3-201ENST00000263388 GRINAQ7Z429 371 aa16.05■□□□□ 0.16
NOTCH3-201ENST00000263388 ANGPTL5Q86XS5 388 aa16.05■□□□□ 0.16
NOTCH3-201ENST00000263388 CISD2Q8N5K1 135 aaKnown RBP16.05■□□□□ 0.16
NOTCH3-201ENST00000263388 SEMA4CQ9C0C4 833 aa16.05■□□□□ 0.16
NOTCH3-201ENST00000263388 ABCA3Q99758 1704 aa16.05■□□□□ 0.16
NOTCH3-201ENST00000263388 NID1P14543 1247 aa16.05■□□□□ 0.16
NOTCH3-201ENST00000263388 NPY4RP50391 375 aa16.05■□□□□ 0.16
NOTCH3-201ENST00000263388 RPL11P62913 178 aaKnown RBP16.05■□□□□ 0.16
NOTCH3-201ENST00000263388 PRAMEF20Q5VT98 475 aa16.05■□□□□ 0.16
NOTCH3-201ENST00000263388 Q6ZRG5 221 aa16.05■□□□□ 0.16
NOTCH3-201ENST00000263388 SLC35B4Q969S0 331 aa16.05■□□□□ 0.16
NOTCH3-201ENST00000263388 GNB4Q9HAV0 340 aa16.05■□□□□ 0.16
NOTCH3-201ENST00000263388 CBY3A6NI87 242 aa16.05■□□□□ 0.16
NOTCH3-201ENST00000263388 P2RY10O00398 339 aa16.05■□□□□ 0.16
NOTCH3-201ENST00000263388 GFRA2O00451 464 aa16.05■□□□□ 0.16
NOTCH3-201ENST00000263388 CIDEAO60543 219 aa16.05■□□□□ 0.16
NOTCH3-201ENST00000263388 UBE2G1P62253 170 aa16.04■□□□□ 0.16
NOTCH3-201ENST00000263388 C9orf135Q5VTT2 229 aa16.04■□□□□ 0.16
NOTCH3-201ENST00000263388 NANOGP1Q8N7R0 232 aa16.04■□□□□ 0.16
NOTCH3-201ENST00000263388 ZMAT3Q9HA38 289 aaKnown RBP16.04■□□□□ 0.16
NOTCH3-201ENST00000263388 HEYLQ9NQ87 328 aaPredicted RBP16.04■□□□□ 0.16
NOTCH3-201ENST00000263388 CLEC2DQ9UHP7 191 aa16.04■□□□□ 0.16
NOTCH3-201ENST00000263388 NHSQ6T4R5 1651 aa16.04■□□□□ 0.16
NOTCH3-201ENST00000263388 ASAH1Q13510 395 aa16.04■□□□□ 0.16
NOTCH3-201ENST00000263388 SLC25A43Q8WUT9 341 aaPredicted RBP16.04■□□□□ 0.16
NOTCH3-201ENST00000263388 LIPHQ8WWY8 451 aa16.04■□□□□ 0.16
NOTCH3-201ENST00000263388 PADI1Q9ULC6 663 aa16.04■□□□□ 0.16
NOTCH3-201ENST00000263388 SELENOFO60613 162 aa16.04■□□□□ 0.16
NOTCH3-201ENST00000263388 SPP1P10451 314 aa16.04■□□□□ 0.16
NOTCH3-201ENST00000263388 CPN1P15169 458 aa16.04■□□□□ 0.16
NOTCH3-201ENST00000263388 MRPL19P49406 292 aaKnown RBP16.04■□□□□ 0.16
NOTCH3-201ENST00000263388 OR8G2PQ6IF36 304 aa16.04■□□□□ 0.16
NOTCH3-201ENST00000263388 ZNF620Q6ZNG0 422 aa16.04■□□□□ 0.16
NOTCH3-201ENST00000263388 PFN4Q8NHR9 129 aa16.04■□□□□ 0.16
NOTCH3-201ENST00000263388 ASIC5Q9NY37 505 aa16.04■□□□□ 0.16
NOTCH3-201ENST00000263388 URGCP-MRPS24S4R325 110 aa16.04■□□□□ 0.16
NOTCH3-201ENST00000263388 C1QBP02746 253 aa16.04■□□□□ 0.16
NOTCH3-201ENST00000263388 PDGFAP04085 211 aa16.04■□□□□ 0.16
NOTCH3-201ENST00000263388 APEX1P27695 318 aaKnown RBP16.04■□□□□ 0.16
NOTCH3-201ENST00000263388 APOBEC1P41238 236 aaKnown RBP16.04■□□□□ 0.16
NOTCH3-201ENST00000263388 METRNLQ641Q3 311 aa16.04■□□□□ 0.16
NOTCH3-201ENST00000263388 LINC00346Q8IVM7 164 aa16.04■□□□□ 0.16
NOTCH3-201ENST00000263388 SPACA1Q9HBV2 294 aa16.04■□□□□ 0.16
NOTCH3-201ENST00000263388 NIT2Q9NQR4 276 aa16.04■□□□□ 0.16
NOTCH3-201ENST00000263388 USP22Q9UPT9 525 aa16.04■□□□□ 0.16
NOTCH3-201ENST00000263388 OR2G3Q8NGZ4 309 aa16.04■□□□□ 0.16
NOTCH3-201ENST00000263388 NDUFB11Q9NX14 153 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms