RNA–Protein interactions for RNA: ENST00000261811.5

CYSTM1-201, Transcript of cysteine rich transmembrane module containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CYSTM1, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1-201ENST00000261811 SPOCK1Q08629 439 aa16.27■□□□□ 0.2
CYSTM1-201ENST00000261811 CRMP1Q14194 572 aa16.27■□□□□ 0.2
CYSTM1-201ENST00000261811 PTGES3Q15185 160 aaKnown RBP16.27■□□□□ 0.2
CYSTM1-201ENST00000261811 PABPC1L2AQ5JQF8 200 aa16.27■□□□□ 0.2
CYSTM1-201ENST00000261811 AGAP6Q5VW22 663 aa16.27■□□□□ 0.2
CYSTM1-201ENST00000261811 OR2AJ1Q8NGZ0 328 aa16.27■□□□□ 0.2
CYSTM1-201ENST00000261811 FGFBP3Q8TAT2 258 aa16.27■□□□□ 0.2
CYSTM1-201ENST00000261811 SMAP2Q8WU79 429 aaPredicted RBP16.27■□□□□ 0.2
CYSTM1-201ENST00000261811 TMEM171Q8WVE6 324 aa16.27■□□□□ 0.2
CYSTM1-201ENST00000261811 FBXO17Q96EF6 278 aa16.27■□□□□ 0.2
CYSTM1-201ENST00000261811 FOXN4Q96NZ1 517 aa16.27■□□□□ 0.2
CYSTM1-201ENST00000261811 FN3KQ9H479 309 aa16.27■□□□□ 0.2
CYSTM1-201ENST00000261811 EMC7Q9NPA0 242 aa16.27■□□□□ 0.2
CYSTM1-201ENST00000261811 KCNG2Q9UJ96 466 aa16.27■□□□□ 0.2
CYSTM1-201ENST00000261811 IGHV2OR16-5A0A0B4J2B6 119 aa16.26■□□□□ 0.19
CYSTM1-201ENST00000261811 DCTN6O00399 190 aa16.26■□□□□ 0.19
CYSTM1-201ENST00000261811 SURF4O15260 269 aa16.26■□□□□ 0.19
CYSTM1-201ENST00000261811 BMP4P12644 408 aa16.26■□□□□ 0.19
CYSTM1-201ENST00000261811 APOBEC3AP31941 199 aaPredicted RBP16.26■□□□□ 0.19
CYSTM1-201ENST00000261811 RPS23P62266 143 aaKnown RBP16.26■□□□□ 0.19
CYSTM1-201ENST00000261811 PPP2R2BQ00005 443 aa16.26■□□□□ 0.19
CYSTM1-201ENST00000261811 TEKQ02763 1124 aa16.26■□□□□ 0.19
CYSTM1-201ENST00000261811 DAG1Q14118 895 aa16.26■□□□□ 0.19
CYSTM1-201ENST00000261811 ENDOGQ14249 297 aaKnown RBP16.26■□□□□ 0.19
CYSTM1-201ENST00000261811 SNAPC1Q16533 368 aa16.26■□□□□ 0.19
CYSTM1-201ENST00000261811 ZNF362Q5T0B9 420 aaPredicted RBP16.26■□□□□ 0.19
CYSTM1-201ENST00000261811 ACSM5Q6NUN0 579 aa16.26■□□□□ 0.19
CYSTM1-201ENST00000261811 ARL9Q6T311 187 aa16.26■□□□□ 0.19
CYSTM1-201ENST00000261811 NUP37Q8NFH4 326 aa16.26■□□□□ 0.19
CYSTM1-201ENST00000261811 GJC3Q8NFK1 279 aa16.26■□□□□ 0.19
CYSTM1-201ENST00000261811 LILRB1Q8NHL6 650 aaPredicted RBP16.26■□□□□ 0.19
CYSTM1-201ENST00000261811 C11orf40Q8WZ69 217 aa16.26■□□□□ 0.19
CYSTM1-201ENST00000261811 NRGNQ92686 78 aa16.26■□□□□ 0.19
CYSTM1-201ENST00000261811 EME1Q96AY2 570 aa16.26■□□□□ 0.19
CYSTM1-201ENST00000261811 MS4A3Q96HJ5 214 aa16.26■□□□□ 0.19
CYSTM1-201ENST00000261811 ZNF75AQ96N20 296 aa16.26■□□□□ 0.19
CYSTM1-201ENST00000261811 CIB1Q99828 191 aa16.26■□□□□ 0.19
CYSTM1-201ENST00000261811 OR2H1Q9GZK4 316 aa16.26■□□□□ 0.19
CYSTM1-201ENST00000261811 CXorf56Q9H5V9 222 aa16.26■□□□□ 0.19
CYSTM1-201ENST00000261811 NOX3Q9HBY0 568 aa16.26■□□□□ 0.19
CYSTM1-201ENST00000261811 EIF3KQ9UBQ5 218 aaKnown RBP16.26■□□□□ 0.19
CYSTM1-201ENST00000261811 NDRG4Q9ULP0 352 aaKnown RBP16.26■□□□□ 0.19
CYSTM1-201ENST00000261811 PLEKHA6Q9Y2H5 1048 aa16.26■□□□□ 0.19
CYSTM1-201ENST00000261811 STOMP27105 288 aa16.25■□□□□ 0.19
CYSTM1-201ENST00000261811 GDI2P50395 445 aaKnown RBP16.25■□□□□ 0.19
CYSTM1-201ENST00000261811 ALDH3A2P51648 485 aa16.25■□□□□ 0.19
CYSTM1-201ENST00000261811 PSG4Q00888 419 aa16.25■□□□□ 0.19
CYSTM1-201ENST00000261811 ZSCAN2Q7Z7L9 614 aaPredicted RBP16.25■□□□□ 0.19
CYSTM1-201ENST00000261811 SLC26A10Q8NG04 563 aa16.25■□□□□ 0.19
CYSTM1-201ENST00000261811 OR9Q1Q8NGQ5 310 aa16.25■□□□□ 0.19
CYSTM1-201ENST00000261811 NEUROG1Q92886 237 aa16.25■□□□□ 0.19
CYSTM1-201ENST00000261811 DDOQ99489 341 aa16.25■□□□□ 0.19
CYSTM1-201ENST00000261811 LIME1Q9H400 295 aa16.25■□□□□ 0.19
CYSTM1-201ENST00000261811 TVP23BQ9NYZ1 205 aa16.25■□□□□ 0.19
CYSTM1-201ENST00000261811 FBXO9Q9UK97 447 aaPredicted RBP16.25■□□□□ 0.19
CYSTM1-201ENST00000261811 POLQO75417 2590 aa16.25■□□□□ 0.19
CYSTM1-201ENST00000261811 FAM171A2A8MVW0 826 aa16.24■□□□□ 0.19
CYSTM1-201ENST00000261811 E7EQL1 145 aa16.24■□□□□ 0.19
CYSTM1-201ENST00000261811 SGCEO43556 437 aa16.24■□□□□ 0.19
CYSTM1-201ENST00000261811 MPZL1O95297 269 aa16.24■□□□□ 0.19
CYSTM1-201ENST00000261811 SNAP29O95721 258 aa16.24■□□□□ 0.19
CYSTM1-201ENST00000261811 GAAP10253 952 aa16.24■□□□□ 0.19
CYSTM1-201ENST00000261811 COX5BP10606 129 aa16.24■□□□□ 0.19
CYSTM1-201ENST00000261811 ZNF35P13682 527 aa16.24■□□□□ 0.19
CYSTM1-201ENST00000261811 SPI1P17947 270 aa16.24■□□□□ 0.19
CYSTM1-201ENST00000261811 CALCRP30988 508 aa16.24■□□□□ 0.19
CYSTM1-201ENST00000261811 PYCR1P32322 319 aa16.24■□□□□ 0.19
CYSTM1-201ENST00000261811 RAD52P43351 418 aa16.24■□□□□ 0.19
CYSTM1-201ENST00000261811 TMEM236Q5W0B7 351 aa16.24■□□□□ 0.19
CYSTM1-201ENST00000261811 UGT2A3Q6UWM9 527 aa16.24■□□□□ 0.19
CYSTM1-201ENST00000261811 ZBTB49Q6ZSB9 765 aa16.24■□□□□ 0.19
CYSTM1-201ENST00000261811 ZNF584Q8IVC4 421 aa16.24■□□□□ 0.19
CYSTM1-201ENST00000261811 C1orf174Q8IYL3 243 aa16.24■□□□□ 0.19
CYSTM1-201ENST00000261811 MUC15Q8N387 334 aa16.24■□□□□ 0.19
CYSTM1-201ENST00000261811 OR6K6Q8NGW6 343 aa16.24■□□□□ 0.19
CYSTM1-201ENST00000261811 AKR7LQ8NHP1 331 aa16.24■□□□□ 0.19
CYSTM1-201ENST00000261811 NMNAT2Q9BZQ4 307 aa16.24■□□□□ 0.19
CYSTM1-201ENST00000261811 RIBC2Q9H4K1 309 aa16.24■□□□□ 0.19
CYSTM1-201ENST00000261811 CA10Q9NS85 328 aa16.24■□□□□ 0.19
CYSTM1-201ENST00000261811 BEX4Q9NWD9 120 aaPredicted RBP16.24■□□□□ 0.19
CYSTM1-201ENST00000261811 PLEK2Q9NYT0 353 aa16.24■□□□□ 0.19
CYSTM1-201ENST00000261811 USE1Q9NZ43 259 aa16.24■□□□□ 0.19
CYSTM1-201ENST00000261811 H2AFY2Q9P0M6 372 aaPredicted RBP16.24■□□□□ 0.19
CYSTM1-201ENST00000261811 ASH2LQ9UBL3 628 aa16.24■□□□□ 0.19
CYSTM1-201ENST00000261811 LAMP3Q9UQV4 416 aa16.24■□□□□ 0.19
CYSTM1-201ENST00000261811 RTTNQ86VV8 2226 aa16.23■□□□□ 0.19
CYSTM1-201ENST00000261811 ANKRD65E5RJM6 399 aa16.23■□□□□ 0.19
CYSTM1-201ENST00000261811 PRODHO43272 600 aa16.23■□□□□ 0.19
CYSTM1-201ENST00000261811 DOK2O60496 412 aa16.23■□□□□ 0.19
CYSTM1-201ENST00000261811 MITFO75030 526 aaPredicted RBP16.23■□□□□ 0.19
CYSTM1-201ENST00000261811 ATE1O95260 518 aa16.23■□□□□ 0.19
CYSTM1-201ENST00000261811 CCNOP22674 350 aa16.23■□□□□ 0.19
CYSTM1-201ENST00000261811 NR4A1P22736 598 aa16.23■□□□□ 0.19
CYSTM1-201ENST00000261811 APEX1P27695 318 aaKnown RBP16.23■□□□□ 0.19
CYSTM1-201ENST00000261811 TTKP33981 857 aa16.23■□□□□ 0.19
CYSTM1-201ENST00000261811 ADAM8P78325 824 aa16.23■□□□□ 0.19
CYSTM1-201ENST00000261811 SNTB2Q13425 540 aaKnown RBP16.23■□□□□ 0.19
CYSTM1-201ENST00000261811 MYPOPQ86VE0 399 aaPredicted RBP16.23■□□□□ 0.19
CYSTM1-201ENST00000261811 MBD6Q96DN6 1003 aa16.23■□□□□ 0.19
CYSTM1-201ENST00000261811 WNT5BQ9H1J7 359 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms