RNA–Protein interactions for RNA: ENST00000257290.9

PDGFRA-201, Transcript of platelet derived growth factor receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRA, Length 6,576 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-201ENST00000257290 PIGVQ9NUD9 493 aa6.2□□□□□ -1.42
PDGFRA-201ENST00000257290 BAZ2AQ9UIF9 1905 aaKnown RBP6.19□□□□□ -1.42
PDGFRA-201ENST00000257290 CPSF4LA6NMK7 179 aaKnown RBP6.19□□□□□ -1.42
PDGFRA-201ENST00000257290 SLC16A5O15375 505 aa6.19□□□□□ -1.42
PDGFRA-201ENST00000257290 TMPRSS11DO60235 418 aa6.19□□□□□ -1.42
PDGFRA-201ENST00000257290 SEMA7AO75326 666 aa6.19□□□□□ -1.42
PDGFRA-201ENST00000257290 RCC1P18754 421 aaPredicted RBP6.19□□□□□ -1.42
PDGFRA-201ENST00000257290 EDNRBP24530 442 aa6.19□□□□□ -1.42
PDGFRA-201ENST00000257290 NDUFV1P49821 464 aa6.19□□□□□ -1.42
PDGFRA-201ENST00000257290 PAX2Q02962 417 aa6.19□□□□□ -1.42
PDGFRA-201ENST00000257290 TP53I3Q53FA7 332 aa6.19□□□□□ -1.42
PDGFRA-201ENST00000257290 PYY3Q5JQD4 70 aa6.19□□□□□ -1.42
PDGFRA-201ENST00000257290 FAM71F2Q6NXP2 309 aa6.19□□□□□ -1.42
PDGFRA-201ENST00000257290 DTWD1Q8N5C7 304 aa6.19□□□□□ -1.42
PDGFRA-201ENST00000257290 OR51S1Q8NGJ8 323 aa6.19□□□□□ -1.42
PDGFRA-201ENST00000257290 SECTM1Q8WVN6 248 aa6.19□□□□□ -1.42
PDGFRA-201ENST00000257290 TMEM40Q8WWA1 233 aa6.19□□□□□ -1.42
PDGFRA-201ENST00000257290 ABHD1Q96SE0 405 aa6.19□□□□□ -1.42
PDGFRA-201ENST00000257290 EPHX3Q9H6B9 360 aa6.19□□□□□ -1.42
PDGFRA-201ENST00000257290 HIF1ANQ9NWT6 349 aa6.19□□□□□ -1.42
PDGFRA-201ENST00000257290 HCFC1R1Q9NWW0 138 aa6.19□□□□□ -1.42
PDGFRA-201ENST00000257290 CDC42EP3Q9UKI2 254 aa6.19□□□□□ -1.42
PDGFRA-201ENST00000257290 MYH1P12882 1939 aa6.19□□□□□ -1.42
PDGFRA-201ENST00000257290 ZNF831Q5JPB2 1677 aa6.19□□□□□ -1.42
PDGFRA-201ENST00000257290 MDFIC2A0A1B0GVS7 189 aa6.19□□□□□ -1.42
PDGFRA-201ENST00000257290 C7orf66A4D0T2 115 aa6.19□□□□□ -1.42
PDGFRA-201ENST00000257290 ELNP15502 786 aa6.19□□□□□ -1.42
PDGFRA-201ENST00000257290 FPR2P25090 351 aa6.19□□□□□ -1.42
PDGFRA-201ENST00000257290 MTNR1AP48039 350 aa6.19□□□□□ -1.42
PDGFRA-201ENST00000257290 SIGLEC14Q08ET2 396 aa6.19□□□□□ -1.42
PDGFRA-201ENST00000257290 IAH1Q2TAA2 248 aaPredicted RBP6.19□□□□□ -1.42
PDGFRA-201ENST00000257290 TMEM183AQ8IXX5 376 aa6.19□□□□□ -1.42
PDGFRA-201ENST00000257290 VN1R17PQ8TDU5 208 aa6.19□□□□□ -1.42
PDGFRA-201ENST00000257290 ZNF75AQ96N20 296 aa6.19□□□□□ -1.42
PDGFRA-201ENST00000257290 SLC32A1Q9H598 525 aa6.19□□□□□ -1.42
PDGFRA-201ENST00000257290 SEBOXQ9HB31 216 aaPredicted RBP6.19□□□□□ -1.42
PDGFRA-201ENST00000257290 ZFP64Q9NPA5 681 aa6.19□□□□□ -1.42
PDGFRA-201ENST00000257290 NDRG4Q9ULP0 352 aaKnown RBP6.19□□□□□ -1.42
PDGFRA-201ENST00000257290 WIPI2Q9Y4P8 454 aa6.19□□□□□ -1.42
PDGFRA-201ENST00000257290 OR51B2Q9Y5P1 312 aa6.19□□□□□ -1.42
PDGFRA-201ENST00000257290 TRAPPC1Q9Y5R8 145 aa6.19□□□□□ -1.42
PDGFRA-201ENST00000257290 STYXL1Q9Y6J8 313 aa6.19□□□□□ -1.42
PDGFRA-201ENST00000257290 LAMB1P07942 1786 aa6.19□□□□□ -1.42
PDGFRA-201ENST00000257290 COL24A1Q17RW2 1714 aa6.19□□□□□ -1.42
PDGFRA-201ENST00000257290 LAMA4Q16363 1823 aa6.19□□□□□ -1.42
PDGFRA-201ENST00000257290 TRAV39A0A0B4J263 110 aa6.19□□□□□ -1.42
PDGFRA-201ENST00000257290 TRDV1A0A1B0GX56 115 aa6.19□□□□□ -1.42
PDGFRA-201ENST00000257290 GFYI3L273 518 aa6.19□□□□□ -1.42
PDGFRA-201ENST00000257290 RAD51DO75771 328 aa6.19□□□□□ -1.42
PDGFRA-201ENST00000257290 RHBDL1O75783 438 aa6.19□□□□□ -1.42
PDGFRA-201ENST00000257290 STC2O76061 302 aa6.19□□□□□ -1.42
PDGFRA-201ENST00000257290 SOD3P08294 240 aa6.19□□□□□ -1.42
PDGFRA-201ENST00000257290 OR5H8P0DN80 308 aa6.19□□□□□ -1.42
PDGFRA-201ENST00000257290 SLC6A1P30531 599 aa6.19□□□□□ -1.42
PDGFRA-201ENST00000257290 PLEKHS1Q5SXH7 462 aa6.19□□□□□ -1.42
PDGFRA-201ENST00000257290 FRMPD2BQ6IN97 320 aa6.19□□□□□ -1.42
PDGFRA-201ENST00000257290 TBPL2Q6SJ96 375 aa6.19□□□□□ -1.42
PDGFRA-201ENST00000257290 PARS2Q7L3T8 475 aaKnown RBP6.19□□□□□ -1.42
PDGFRA-201ENST00000257290 NUBPLQ8TB37 319 aa6.19□□□□□ -1.42
PDGFRA-201ENST00000257290 SLCO4A1Q96BD0 722 aa6.19□□□□□ -1.42
PDGFRA-201ENST00000257290 GPR22Q99680 433 aa6.19□□□□□ -1.42
PDGFRA-201ENST00000257290 ELOVL2Q9NXB9 296 aa6.19□□□□□ -1.42
PDGFRA-201ENST00000257290 ITGA5P08648 1049 aa6.19□□□□□ -1.42
PDGFRA-201ENST00000257290 DMWDQ09019 674 aa6.19□□□□□ -1.42
PDGFRA-201ENST00000257290 SPATA45Q537H7 98 aa6.19□□□□□ -1.42
PDGFRA-201ENST00000257290 TMEM177Q53S58 311 aa6.19□□□□□ -1.42
PDGFRA-201ENST00000257290 MORN1Q5T089 497 aa6.19□□□□□ -1.42
PDGFRA-201ENST00000257290 MARC1Q5VT66 337 aa6.19□□□□□ -1.42
PDGFRA-201ENST00000257290 STYXQ8WUJ0 223 aa6.19□□□□□ -1.42
PDGFRA-201ENST00000257290 SPSB1Q96BD6 273 aa6.19□□□□□ -1.42
PDGFRA-201ENST00000257290 WDR92Q96MX6 357 aa6.19□□□□□ -1.42
PDGFRA-201ENST00000257290 TAPBPLQ9BX59 468 aa6.19□□□□□ -1.42
PDGFRA-201ENST00000257290 MRPL17Q9NRX2 175 aaKnown RBP6.19□□□□□ -1.42
PDGFRA-201ENST00000257290 NUDT4Q9NZJ9 180 aa6.19□□□□□ -1.42
PDGFRA-201ENST00000257290 VAX2Q9UIW0 290 aa6.19□□□□□ -1.42
PDGFRA-201ENST00000257290 RREB1Q92766 1687 aa6.19□□□□□ -1.42
PDGFRA-201ENST00000257290 TTC24A2A3L6 582 aaPredicted RBP6.19□□□□□ -1.42
PDGFRA-201ENST00000257290 MAP1LC3B2A6NCE7 125 aa6.19□□□□□ -1.42
PDGFRA-201ENST00000257290 E5RGE8 158 aa6.19□□□□□ -1.42
PDGFRA-201ENST00000257290 RAMP2O60895 175 aa6.19□□□□□ -1.42
PDGFRA-201ENST00000257290 LRATO95237 230 aa6.19□□□□□ -1.42
PDGFRA-201ENST00000257290 EOMESO95936 686 aa6.19□□□□□ -1.42
PDGFRA-201ENST00000257290 TACSTD2P09758 323 aa6.19□□□□□ -1.42
PDGFRA-201ENST00000257290 CNR2P34972 360 aa6.19□□□□□ -1.42
PDGFRA-201ENST00000257290 DNASE1L1P49184 302 aa6.19□□□□□ -1.42
PDGFRA-201ENST00000257290 ZNF385BQ569K4 471 aa6.19□□□□□ -1.42
PDGFRA-201ENST00000257290 RAB42Q8N4Z0 105 aa6.19□□□□□ -1.42
PDGFRA-201ENST00000257290 OR10Q1Q8NGQ4 319 aa6.19□□□□□ -1.42
PDGFRA-201ENST00000257290 PYCR2Q96C36 320 aa6.19□□□□□ -1.42
PDGFRA-201ENST00000257290 MAP1LC3BQ9GZQ8 125 aa6.19□□□□□ -1.42
PDGFRA-201ENST00000257290 A8MT66 165 aa6.18□□□□□ -1.42
PDGFRA-201ENST00000257290 M0R129 80 aa6.18□□□□□ -1.42
PDGFRA-201ENST00000257290 SOX1O00570 391 aaPredicted RBP6.18□□□□□ -1.42
PDGFRA-201ENST00000257290 ISLRO14498 428 aa6.18□□□□□ -1.42
PDGFRA-201ENST00000257290 DSCR3O14972 297 aa6.18□□□□□ -1.42
PDGFRA-201ENST00000257290 FCMRO60667 390 aa6.18□□□□□ -1.42
PDGFRA-201ENST00000257290 CXCL14O95715 111 aa6.18□□□□□ -1.42
PDGFRA-201ENST00000257290 DBIP07108 87 aaKnown RBP6.18□□□□□ -1.42
PDGFRA-201ENST00000257290 ESDP10768 282 aa6.18□□□□□ -1.42
PDGFRA-201ENST00000257290 DCTDP32321 178 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms