RNA–Protein interactions for RNA: ENST00000252599.8

COLGALT1-201, Transcript of collagen beta(1-O)galactosyltransferase 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COLGALT1, Length 3,704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLGALT1-201ENST00000252599 SARGQ9BW04 601 aa12.21□□□□□ -0.45
COLGALT1-201ENST00000252599 AUNIPQ9H7T9 357 aa12.21□□□□□ -0.45
COLGALT1-201ENST00000252599 LMAN1LQ9HAT1 526 aa12.21□□□□□ -0.45
COLGALT1-201ENST00000252599 SNX11Q9Y5W9 270 aa12.21□□□□□ -0.45
COLGALT1-201ENST00000252599 LY75O60449 1722 aa12.21□□□□□ -0.45
COLGALT1-201ENST00000252599 COL11A1P12107 1806 aaPredicted RBP12.21□□□□□ -0.45
COLGALT1-201ENST00000252599 MEIS3P1A6NDR6 274 aa12.21□□□□□ -0.45
COLGALT1-201ENST00000252599 CPSF4LA6NMK7 179 aaKnown RBP12.21□□□□□ -0.45
COLGALT1-201ENST00000252599 EMC8O43402 210 aa12.21□□□□□ -0.45
COLGALT1-201ENST00000252599 GBAP04062 536 aa12.21□□□□□ -0.45
COLGALT1-201ENST00000252599 LIPFP07098 398 aa12.21□□□□□ -0.45
COLGALT1-201ENST00000252599 OR4A8P0C604 315 aa12.21□□□□□ -0.45
COLGALT1-201ENST00000252599 EPCAMP16422 314 aa12.21□□□□□ -0.45
COLGALT1-201ENST00000252599 OMGP23515 440 aa12.21□□□□□ -0.45
COLGALT1-201ENST00000252599 FPR2P25090 351 aa12.21□□□□□ -0.45
COLGALT1-201ENST00000252599 CD34P28906 385 aa12.21□□□□□ -0.45
COLGALT1-201ENST00000252599 RAB9AP51151 201 aa12.21□□□□□ -0.45
COLGALT1-201ENST00000252599 UCP2P55851 309 aa12.21□□□□□ -0.45
COLGALT1-201ENST00000252599 ST8SIA6P61647 398 aa12.21□□□□□ -0.45
COLGALT1-201ENST00000252599 IL10RBQ08334 325 aa12.21□□□□□ -0.45
COLGALT1-201ENST00000252599 PTGES3Q15185 160 aaKnown RBP12.21□□□□□ -0.45
COLGALT1-201ENST00000252599 ELOA3BQ3SY89 546 aa12.21□□□□□ -0.45
COLGALT1-201ENST00000252599 ZNF66Q6ZN08 573 aa12.21□□□□□ -0.45
COLGALT1-201ENST00000252599 Q6ZRG5 221 aa12.21□□□□□ -0.45
COLGALT1-201ENST00000252599 DMBX1Q8NFW5 382 aa12.21□□□□□ -0.45
COLGALT1-201ENST00000252599 ELOA3Q8NG57 546 aa12.21□□□□□ -0.45
COLGALT1-201ENST00000252599 OR10A5Q9H207 317 aa12.21□□□□□ -0.45
COLGALT1-201ENST00000252599 G6PC2Q9NQR9 355 aa12.21□□□□□ -0.45
COLGALT1-201ENST00000252599 MEMO1Q9Y316 297 aa12.21□□□□□ -0.45
COLGALT1-201ENST00000252599 ATG4BQ9Y4P1 393 aa12.21□□□□□ -0.45
COLGALT1-201ENST00000252599 ASB1Q9Y576 335 aa12.21□□□□□ -0.45
COLGALT1-201ENST00000252599 DICER1Q9UPY3 1922 aaKnown RBP12.21□□□□□ -0.46
COLGALT1-201ENST00000252599 HHLA1C9JL84 531 aa12.21□□□□□ -0.46
COLGALT1-201ENST00000252599 PPIHO43447 177 aaKnown RBP12.21□□□□□ -0.46
COLGALT1-201ENST00000252599 CLDN7O95471 211 aa12.21□□□□□ -0.46
COLGALT1-201ENST00000252599 UROSP10746 265 aa12.21□□□□□ -0.46
COLGALT1-201ENST00000252599 BPIP17213 487 aa12.21□□□□□ -0.46
COLGALT1-201ENST00000252599 WNT4P56705 351 aa12.21□□□□□ -0.46
COLGALT1-201ENST00000252599 RAB1AP62820 205 aa12.21□□□□□ -0.46
COLGALT1-201ENST00000252599 CHIT1Q13231 466 aa12.21□□□□□ -0.46
COLGALT1-201ENST00000252599 SLC17A1Q14916 467 aa12.21□□□□□ -0.46
COLGALT1-201ENST00000252599 EBPQ15125 230 aaKnown RBP12.21□□□□□ -0.46
COLGALT1-201ENST00000252599 ZNF343Q6P1L6 599 aa12.21□□□□□ -0.46
COLGALT1-201ENST00000252599 IL34Q6ZMJ4 242 aa12.21□□□□□ -0.46
COLGALT1-201ENST00000252599 MED25Q71SY5 747 aa12.21□□□□□ -0.46
COLGALT1-201ENST00000252599 HMGN2P46Q86SG4 172 aa12.21□□□□□ -0.46
COLGALT1-201ENST00000252599 C1orf87Q8N0U7 546 aa12.21□□□□□ -0.46
COLGALT1-201ENST00000252599 HIST3H2BBQ8N257 126 aa12.21□□□□□ -0.46
COLGALT1-201ENST00000252599 FAM124BQ9H5Z6 455 aaPredicted RBP12.21□□□□□ -0.46
COLGALT1-201ENST00000252599 TMEM27Q9HBJ8 222 aa12.21□□□□□ -0.46
COLGALT1-201ENST00000252599 SH2B3Q9UQQ2 575 aa12.21□□□□□ -0.46
COLGALT1-201ENST00000252599 CYBAP13498 195 aa12.2□□□□□ -0.46
COLGALT1-201ENST00000252599 MMDQ15546 238 aa12.2□□□□□ -0.46
COLGALT1-201ENST00000252599 UNQ5815/PRO19632Q6UWF5 114 aa12.2□□□□□ -0.46
COLGALT1-201ENST00000252599 SYT9Q86SS6 491 aa12.2□□□□□ -0.46
COLGALT1-201ENST00000252599 NKAIN3Q8N8D7 197 aa12.2□□□□□ -0.46
COLGALT1-201ENST00000252599 OR5M3Q8NGP4 307 aa12.2□□□□□ -0.46
COLGALT1-201ENST00000252599 OR13C9Q8NGT0 318 aa12.2□□□□□ -0.46
COLGALT1-201ENST00000252599 NFKBIDQ8NI38 313 aa12.2□□□□□ -0.46
COLGALT1-201ENST00000252599 UBTD2Q8WUN7 234 aa12.2□□□□□ -0.46
COLGALT1-201ENST00000252599 MIB2Q96AX9 1013 aa12.2□□□□□ -0.46
COLGALT1-201ENST00000252599 CST9LQ9H4G1 147 aa12.2□□□□□ -0.46
COLGALT1-201ENST00000252599 IL36AQ9UHA7 158 aa12.2□□□□□ -0.46
COLGALT1-201ENST00000252599 CABIN1Q9Y6J0 2220 aa12.2□□□□□ -0.46
COLGALT1-201ENST00000252599 A0A1B0GUH1 482 aa12.2□□□□□ -0.46
COLGALT1-201ENST00000252599 OR2F2O95006 317 aa12.2□□□□□ -0.46
COLGALT1-201ENST00000252599 LCATP04180 440 aa12.2□□□□□ -0.46
COLGALT1-201ENST00000252599 MELTFP08582 738 aa12.2□□□□□ -0.46
COLGALT1-201ENST00000252599 RBMS1P29558 406 aaKnown RBP12.2□□□□□ -0.46
COLGALT1-201ENST00000252599 HOXA9P31269 272 aa12.2□□□□□ -0.46
COLGALT1-201ENST00000252599 OR2F1Q13607 317 aa12.2□□□□□ -0.46
COLGALT1-201ENST00000252599 ABRAXAS2Q15018 415 aa12.2□□□□□ -0.46
COLGALT1-201ENST00000252599 RPE65Q16518 533 aa12.2□□□□□ -0.46
COLGALT1-201ENST00000252599 HNRNPA1L2Q32P51 320 aaKnown RBP12.2□□□□□ -0.46
COLGALT1-201ENST00000252599 EIPR1Q53HC9 387 aa12.2□□□□□ -0.46
COLGALT1-201ENST00000252599 Q6ZVH6 145 aa12.2□□□□□ -0.46
COLGALT1-201ENST00000252599 LHFPL4Q7Z7J7 247 aa12.2□□□□□ -0.46
COLGALT1-201ENST00000252599 SYT12Q8IV01 421 aa12.2□□□□□ -0.46
COLGALT1-201ENST00000252599 RNF175Q8N4F7 328 aa12.2□□□□□ -0.46
COLGALT1-201ENST00000252599 OR4S1Q8NGB4 309 aa12.2□□□□□ -0.46
COLGALT1-201ENST00000252599 OR8J1Q8NGP2 316 aa12.2□□□□□ -0.46
COLGALT1-201ENST00000252599 FAM210BQ96KR6 192 aa12.2□□□□□ -0.46
COLGALT1-201ENST00000252599 HIST1H2BLQ99880 126 aa12.2□□□□□ -0.46
COLGALT1-201ENST00000252599 INPP5KQ9BT40 448 aa12.2□□□□□ -0.46
COLGALT1-201ENST00000252599 WRAP53Q9BUR4 548 aaKnown RBP12.2□□□□□ -0.46
COLGALT1-201ENST00000252599 DERL2Q9GZP9 239 aa12.2□□□□□ -0.46
COLGALT1-201ENST00000252599 POLR2J3Q9H1A7 115 aaKnown RBP12.2□□□□□ -0.46
COLGALT1-201ENST00000252599 PITPNC1Q9UKF7 332 aa12.2□□□□□ -0.46
COLGALT1-201ENST00000252599 LOXHD1Q8IVV2 1947 aa12.2□□□□□ -0.46
COLGALT1-201ENST00000252599 ANKRD66B4E2M5 251 aa12.2□□□□□ -0.46
COLGALT1-201ENST00000252599 HSD17B6O14756 317 aa12.2□□□□□ -0.46
COLGALT1-201ENST00000252599 FFAR2O15552 330 aa12.2□□□□□ -0.46
COLGALT1-201ENST00000252599 PLK5Q496M5 336 aa12.2□□□□□ -0.46
COLGALT1-201ENST00000252599 DNM1P34Q6PK57 102 aa12.2□□□□□ -0.46
COLGALT1-201ENST00000252599 CEACAM19Q7Z692 300 aa12.2□□□□□ -0.46
COLGALT1-201ENST00000252599 CYB5D2Q8WUJ1 264 aa12.2□□□□□ -0.46
COLGALT1-201ENST00000252599 MVB12AQ96EY5 273 aa12.2□□□□□ -0.46
COLGALT1-201ENST00000252599 UBXN10Q96LJ8 280 aa12.2□□□□□ -0.46
COLGALT1-201ENST00000252599 CWH43Q9H720 699 aa12.2□□□□□ -0.46
COLGALT1-201ENST00000252599 LOC730098B7Z3J9 87 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms