RNA–Protein interactions for RNA: ENST00000249299.6

LSM8-201, Transcript of LSM8 homolog, U6 small nuclear RNA associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM8, Length 1,305 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8-201ENST00000249299 CDADC1Q9BWV3 514 aa11.39□□□□□ -0.59
LSM8-201ENST00000249299 PIGMQ9H3S5 423 aa11.39□□□□□ -0.59
LSM8-201ENST00000249299 SEC61A2Q9H9S3 476 aa11.39□□□□□ -0.59
LSM8-201ENST00000249299 LSM2Q9Y333 95 aaKnown RBP11.39□□□□□ -0.59
LSM8-201ENST00000249299 BSNQ9UPA5 3926 aa11.39□□□□□ -0.59
LSM8-201ENST00000249299 KIAA1549Q9HCM3 1950 aa11.39□□□□□ -0.59
LSM8-201ENST00000249299 ARPC4-TTLL3A0A0A6YYG9 625 aa11.38□□□□□ -0.59
LSM8-201ENST00000249299 A0A1W2PPL8 197 aa11.38□□□□□ -0.59
LSM8-201ENST00000249299 TVP23AA6NH52 213 aa11.38□□□□□ -0.59
LSM8-201ENST00000249299 SELENOFO60613 162 aa11.38□□□□□ -0.59
LSM8-201ENST00000249299 TOXO94900 526 aa11.38□□□□□ -0.59
LSM8-201ENST00000249299 CGAP01215 116 aa11.38□□□□□ -0.59
LSM8-201ENST00000249299 MT-ND5P03915 603 aa11.38□□□□□ -0.59
LSM8-201ENST00000249299 MRPL3P09001 348 aaKnown RBP11.38□□□□□ -0.59
LSM8-201ENST00000249299 NAA10P41227 235 aaPredicted RBP11.38□□□□□ -0.59
LSM8-201ENST00000249299 ZNF85Q03923 595 aa11.38□□□□□ -0.59
LSM8-201ENST00000249299 PIGFQ07326 219 aa11.38□□□□□ -0.59
LSM8-201ENST00000249299 NFATC3Q12968 1075 aa11.38□□□□□ -0.59
LSM8-201ENST00000249299 MLLT11Q13015 90 aaPredicted RBP11.38□□□□□ -0.59
LSM8-201ENST00000249299 AQP6Q13520 282 aa11.38□□□□□ -0.59
LSM8-201ENST00000249299 CCDC58Q4VC31 144 aa11.38□□□□□ -0.59
LSM8-201ENST00000249299 ZNF684Q5T5D7 378 aa11.38□□□□□ -0.59
LSM8-201ENST00000249299 ANKRD16Q6P6B7 361 aa11.38□□□□□ -0.59
LSM8-201ENST00000249299 ZNF322Q6U7Q0 402 aaPredicted RBP11.38□□□□□ -0.59
LSM8-201ENST00000249299 BEND4Q6ZU67 534 aa11.38□□□□□ -0.59
LSM8-201ENST00000249299 GJC3Q8NFK1 279 aa11.38□□□□□ -0.59
LSM8-201ENST00000249299 OR2AJ1Q8NGZ0 328 aa11.38□□□□□ -0.59
LSM8-201ENST00000249299 SNX33Q8WV41 574 aa11.38□□□□□ -0.59
LSM8-201ENST00000249299 STARD4Q96DR4 205 aa11.38□□□□□ -0.59
LSM8-201ENST00000249299 ALKBH3Q96Q83 286 aaPredicted RBP11.38□□□□□ -0.59
LSM8-201ENST00000249299 DMRTA2Q96SC8 542 aa11.38□□□□□ -0.59
LSM8-201ENST00000249299 KCNN2Q9H2S1 579 aa11.38□□□□□ -0.59
LSM8-201ENST00000249299 C1orf198Q9H425 327 aa11.38□□□□□ -0.59
LSM8-201ENST00000249299 NIPAL2Q9H841 368 aa11.38□□□□□ -0.59
LSM8-201ENST00000249299 MOV10Q9HCE1 1003 aaKnown RBP11.38□□□□□ -0.59
LSM8-201ENST00000249299 BABAM2Q9NXR7 383 aa11.38□□□□□ -0.59
LSM8-201ENST00000249299 TAS2R16Q9NYV7 291 aa11.38□□□□□ -0.59
LSM8-201ENST00000249299 ATPIF1Q9UII2 106 aa11.38□□□□□ -0.59
LSM8-201ENST00000249299 PROCRQ9UNN8 238 aa11.38□□□□□ -0.59
LSM8-201ENST00000249299 MSTNO14793 375 aa11.37□□□□□ -0.59
LSM8-201ENST00000249299 SIAH2O43255 324 aa11.37□□□□□ -0.59
LSM8-201ENST00000249299 APOL3O95236 402 aa11.37□□□□□ -0.59
LSM8-201ENST00000249299 PTHP01270 115 aa11.37□□□□□ -0.59
LSM8-201ENST00000249299 CD1AP06126 327 aa11.37□□□□□ -0.59
LSM8-201ENST00000249299 CD53P19397 219 aa11.37□□□□□ -0.59
LSM8-201ENST00000249299 COX5AP20674 150 aa11.37□□□□□ -0.59
LSM8-201ENST00000249299 HIST1H3AP68431 136 aa11.37□□□□□ -0.59
LSM8-201ENST00000249299 SCRN3Q0VDG4 424 aa11.37□□□□□ -0.59
LSM8-201ENST00000249299 ECH1Q13011 328 aa11.37□□□□□ -0.59
LSM8-201ENST00000249299 HIST2H3PS2Q5TEC6 136 aa11.37□□□□□ -0.59
LSM8-201ENST00000249299 OR7E24Q6IFN5 339 aa11.37□□□□□ -0.59
LSM8-201ENST00000249299 PLXDC2Q6UX71 529 aa11.37□□□□□ -0.59
LSM8-201ENST00000249299 HIST2H3AQ71DI3 136 aa11.37□□□□□ -0.59
LSM8-201ENST00000249299 LINGO2Q7L985 606 aa11.37□□□□□ -0.59
LSM8-201ENST00000249299 SSX8Q7RTT4 187 aa11.37□□□□□ -0.59
LSM8-201ENST00000249299 LHFPL3Q86UP9 236 aa11.37□□□□□ -0.59
LSM8-201ENST00000249299 ZNF679Q8IYX0 411 aa11.37□□□□□ -0.59
LSM8-201ENST00000249299 GCNT2Q8N0V5 402 aa11.37□□□□□ -0.59
LSM8-201ENST00000249299 UBE2J2Q8N2K1 259 aa11.37□□□□□ -0.59
LSM8-201ENST00000249299 C17orf78Q8N4C9 275 aa11.37□□□□□ -0.59
LSM8-201ENST00000249299 SLC22A24Q8N4F4 322 aa11.37□□□□□ -0.59
LSM8-201ENST00000249299 CNEP1R1Q8N9A8 125 aa11.37□□□□□ -0.59
LSM8-201ENST00000249299 GALNT11Q8NCW6 608 aa11.37□□□□□ -0.59
LSM8-201ENST00000249299 OR52N5Q8NH56 324 aa11.37□□□□□ -0.59
LSM8-201ENST00000249299 RNF133Q8WVZ7 376 aa11.37□□□□□ -0.59
LSM8-201ENST00000249299 OR8B4Q96RC9 309 aa11.37□□□□□ -0.59
LSM8-201ENST00000249299 MROQ9BYG7 248 aa11.37□□□□□ -0.59
LSM8-201ENST00000249299 OBP2BQ9NPH6 170 aa11.37□□□□□ -0.59
LSM8-201ENST00000249299 TRIM36Q9NQ86 728 aa11.37□□□□□ -0.59
LSM8-201ENST00000249299 CLEC2DQ9UHP7 191 aa11.37□□□□□ -0.59
LSM8-201ENST00000249299 SMIM31A0A1B0GVY4 71 aa11.36□□□□□ -0.59
LSM8-201ENST00000249299 METTL15A6NJ78 407 aa11.36□□□□□ -0.59
LSM8-201ENST00000249299 SEC14L2O76054 403 aa11.36□□□□□ -0.59
LSM8-201ENST00000249299 APOC1P02654 83 aa11.36□□□□□ -0.59
LSM8-201ENST00000249299 SCG5P05408 212 aa11.36□□□□□ -0.59
LSM8-201ENST00000249299 KRT8P05787 483 aa11.36□□□□□ -0.59
LSM8-201ENST00000249299 ADRA2AP08913 450 aa11.36□□□□□ -0.59
LSM8-201ENST00000249299 SPARCP09486 303 aa11.36□□□□□ -0.59
LSM8-201ENST00000249299 CDAP32320 146 aa11.36□□□□□ -0.59
LSM8-201ENST00000249299 TGM4P49221 684 aa11.36□□□□□ -0.59
LSM8-201ENST00000249299 PMPCAQ10713 525 aa11.36□□□□□ -0.59
LSM8-201ENST00000249299 FAPQ12884 760 aa11.36□□□□□ -0.59
LSM8-201ENST00000249299 ENDOGQ14249 297 aaKnown RBP11.36□□□□□ -0.59
LSM8-201ENST00000249299 SGCAQ16586 387 aa11.36□□□□□ -0.59
LSM8-201ENST00000249299 TIGD6Q17RP2 521 aa11.36□□□□□ -0.59
LSM8-201ENST00000249299 MTFR2Q6P444 385 aa11.36□□□□□ -0.59
LSM8-201ENST00000249299 FDX2Q6P4F2 183 aa11.36□□□□□ -0.59
LSM8-201ENST00000249299 ZNF813Q6ZN06 617 aa11.36□□□□□ -0.59
LSM8-201ENST00000249299 VASH1Q7L8A9 365 aaPredicted RBP11.36□□□□□ -0.59
LSM8-201ENST00000249299 FAM220AQ7Z4H9 259 aa11.36□□□□□ -0.59
LSM8-201ENST00000249299 BTLAQ7Z6A9 289 aa11.36□□□□□ -0.59
LSM8-201ENST00000249299 GABRG1Q8N1C3 465 aa11.36□□□□□ -0.59
LSM8-201ENST00000249299 OR13F1Q8NGS4 319 aa11.36□□□□□ -0.59
LSM8-201ENST00000249299 ST7LQ8TDW4 575 aa11.36□□□□□ -0.59
LSM8-201ENST00000249299 RND1Q92730 232 aa11.36□□□□□ -0.59
LSM8-201ENST00000249299 ZNF837Q96EG3 531 aaPredicted RBP11.36□□□□□ -0.59
LSM8-201ENST00000249299 MGLLQ99685 303 aa11.36□□□□□ -0.59
LSM8-201ENST00000249299 ABHD6Q9BV23 337 aa11.36□□□□□ -0.59
LSM8-201ENST00000249299 HDHD5Q9BXW7 423 aa11.36□□□□□ -0.59
LSM8-201ENST00000249299 DDX28Q9NUL7 540 aaKnown RBP11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms