RNA–Protein interactions for RNA: ENST00000244763.8

SSR1-201, Transcript of signal sequence receptor subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSR1, Length 9,669 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-201ENST00000244763 LINC00346Q8IVM7 164 aa6.72□□□□□ -1.33
SSR1-201ENST00000244763 KDF1Q8NAX2 398 aaPredicted RBP6.72□□□□□ -1.33
SSR1-201ENST00000244763 TMEM255BQ8WV15 326 aa6.72□□□□□ -1.33
SSR1-201ENST00000244763 SLC29A1Q99808 456 aa6.72□□□□□ -1.33
SSR1-201ENST00000244763 CEPT1Q9Y6K0 416 aa6.72□□□□□ -1.33
SSR1-201ENST00000244763 ACOT8O14734 319 aa6.71□□□□□ -1.33
SSR1-201ENST00000244763 CSO75390 466 aaKnown RBP6.71□□□□□ -1.33
SSR1-201ENST00000244763 DAPP51397 102 aa6.71□□□□□ -1.33
SSR1-201ENST00000244763 CTU2Q2VPK5 515 aaKnown RBP6.71□□□□□ -1.33
SSR1-201ENST00000244763 ZNF836Q6ZNA1 936 aa6.71□□□□□ -1.33
SSR1-201ENST00000244763 NCCRP1Q6ZVX7 275 aaPredicted RBP6.71□□□□□ -1.33
SSR1-201ENST00000244763 MEX3DQ86XN8 651 aaKnown RBP6.71□□□□□ -1.33
SSR1-201ENST00000244763 Q96M85 177 aa6.71□□□□□ -1.33
SSR1-201ENST00000244763 TEX101Q9BY14 249 aa6.71□□□□□ -1.33
SSR1-201ENST00000244763 UBQLN3Q9H347 655 aa6.71□□□□□ -1.33
SSR1-201ENST00000244763 ZNF391Q9UJN7 358 aa6.71□□□□□ -1.33
SSR1-201ENST00000244763 RAB5CP51148 216 aa6.71□□□□□ -1.33
SSR1-201ENST00000244763 MRPS34P82930 218 aaKnown RBP6.71□□□□□ -1.33
SSR1-201ENST00000244763 DESI1Q6ICB0 168 aa6.71□□□□□ -1.33
SSR1-201ENST00000244763 WBP2Q969T9 261 aa6.71□□□□□ -1.33
SSR1-201ENST00000244763 ANKRD10Q9NXR5 420 aa6.71□□□□□ -1.33
SSR1-201ENST00000244763 CD300AQ9UGN4 299 aa6.71□□□□□ -1.33
SSR1-201ENST00000244763 NHSQ6T4R5 1651 aa6.71□□□□□ -1.33
SSR1-201ENST00000244763 PRRC2BQ5JSZ5 2229 aaKnown RBP6.71□□□□□ -1.33
SSR1-201ENST00000244763 M0R135 149 aa6.71□□□□□ -1.34
SSR1-201ENST00000244763 TRAF3IP2O43734 574 aaPredicted RBP6.71□□□□□ -1.34
SSR1-201ENST00000244763 GJB3O75712 270 aa6.71□□□□□ -1.34
SSR1-201ENST00000244763 LEXMQ3ZCV2 418 aa6.71□□□□□ -1.34
SSR1-201ENST00000244763 TMEM31Q5JXX7 168 aa6.71□□□□□ -1.34
SSR1-201ENST00000244763 PRAMEF5Q5TYX0 476 aa6.71□□□□□ -1.34
SSR1-201ENST00000244763 PRAMEF6Q5VXH4 476 aa6.71□□□□□ -1.34
SSR1-201ENST00000244763 FBXO27Q8NI29 283 aa6.71□□□□□ -1.34
SSR1-201ENST00000244763 ZNF799Q96GE5 643 aa6.71□□□□□ -1.34
SSR1-201ENST00000244763 FCRL1Q96LA6 429 aa6.71□□□□□ -1.34
SSR1-201ENST00000244763 CCDC74BQ96LY2 380 aa6.71□□□□□ -1.34
SSR1-201ENST00000244763 PPP6CO00743 305 aa6.71□□□□□ -1.34
SSR1-201ENST00000244763 SOD1P00441 154 aa6.71□□□□□ -1.34
SSR1-201ENST00000244763 MT-ND4P03905 459 aa6.71□□□□□ -1.34
SSR1-201ENST00000244763 PRTGQ2VWP7 1150 aa6.71□□□□□ -1.34
SSR1-201ENST00000244763 C9orf152Q5JTZ5 239 aa6.71□□□□□ -1.34
SSR1-201ENST00000244763 NT5CQ8TCD5 201 aa6.71□□□□□ -1.34
SSR1-201ENST00000244763 CIB3Q96Q77 187 aaPredicted RBP6.71□□□□□ -1.34
SSR1-201ENST00000244763 FAM173AQ9BQD7 235 aa6.71□□□□□ -1.34
SSR1-201ENST00000244763 FAM53CQ9NYF3 392 aa6.71□□□□□ -1.34
SSR1-201ENST00000244763 PRRT4C9JH25 899 aa6.71□□□□□ -1.34
SSR1-201ENST00000244763 LY86O95711 162 aa6.71□□□□□ -1.34
SSR1-201ENST00000244763 TFPTP0C1Z6 253 aa6.71□□□□□ -1.34
SSR1-201ENST00000244763 GDNFP39905 211 aa6.71□□□□□ -1.34
SSR1-201ENST00000244763 TMEM41BQ5BJD5 291 aa6.71□□□□□ -1.34
SSR1-201ENST00000244763 LYPD4Q6UWN0 246 aa6.71□□□□□ -1.34
SSR1-201ENST00000244763 BCORP1Q8N888 145 aa6.71□□□□□ -1.34
SSR1-201ENST00000244763 OR51A4Q8NGJ6 313 aa6.71□□□□□ -1.34
SSR1-201ENST00000244763 ZNF75AQ96N20 296 aa6.71□□□□□ -1.34
SSR1-201ENST00000244763 OR11A1Q9GZK7 315 aa6.71□□□□□ -1.34
SSR1-201ENST00000244763 SLC6A17Q9H1V8 727 aa6.71□□□□□ -1.34
SSR1-201ENST00000244763 LIN7CQ9NUP9 197 aaKnown RBP6.71□□□□□ -1.34
SSR1-201ENST00000244763 TRGV5A0A0B4J1U4 118 aa6.71□□□□□ -1.34
SSR1-201ENST00000244763 G3V3Y1 287 aa6.71□□□□□ -1.34
SSR1-201ENST00000244763 BOLA2-SMG1P6H3BVE0 249 aa6.71□□□□□ -1.34
SSR1-201ENST00000244763 MBP02144 154 aa6.71□□□□□ -1.34
SSR1-201ENST00000244763 CT45A10P0DMU9 189 aa6.71□□□□□ -1.34
SSR1-201ENST00000244763 ADRA2CP18825 462 aa6.71□□□□□ -1.34
SSR1-201ENST00000244763 SHBQ15464 509 aa6.71□□□□□ -1.34
SSR1-201ENST00000244763 ADPRMQ3LIE5 342 aa6.71□□□□□ -1.34
SSR1-201ENST00000244763 RGS7BPQ6MZT1 257 aaPredicted RBP6.71□□□□□ -1.34
SSR1-201ENST00000244763 RFLNAQ6ZTI6 216 aa6.71□□□□□ -1.34
SSR1-201ENST00000244763 PARP16Q8N5Y8 322 aa6.71□□□□□ -1.34
SSR1-201ENST00000244763 RHOXF1Q8NHV9 184 aa6.71□□□□□ -1.34
SSR1-201ENST00000244763 LKAAEAR1Q8TD35 194 aa6.71□□□□□ -1.34
SSR1-201ENST00000244763 ADAM19Q9H013 955 aa6.71□□□□□ -1.34
SSR1-201ENST00000244763 SLC22A20A6NK97 555 aa6.71□□□□□ -1.34
SSR1-201ENST00000244763 M0R082 166 aa6.71□□□□□ -1.34
SSR1-201ENST00000244763 HS3ST1O14792 307 aa6.71□□□□□ -1.34
SSR1-201ENST00000244763 GALR2O43603 387 aaPredicted RBP6.71□□□□□ -1.34
SSR1-201ENST00000244763 PTAFRP25105 342 aa6.71□□□□□ -1.34
SSR1-201ENST00000244763 IL34Q6ZMJ4 242 aa6.71□□□□□ -1.34
SSR1-201ENST00000244763 PIWIL3Q7Z3Z3 882 aaKnown RBP6.71□□□□□ -1.34
SSR1-201ENST00000244763 HPSE2Q8WWQ2 592 aa6.71□□□□□ -1.34
SSR1-201ENST00000244763 MRPS24Q96EL2 167 aaKnown RBP6.71□□□□□ -1.34
SSR1-201ENST00000244763 FAM234AQ9H0X4 552 aa6.71□□□□□ -1.34
SSR1-201ENST00000244763 CMC2Q9NRP2 79 aa6.71□□□□□ -1.34
SSR1-201ENST00000244763 USP54Q70EL1 1684 aa6.71□□□□□ -1.34
SSR1-201ENST00000244763 TSTD3H0UI37 97 aa6.71□□□□□ -1.34
SSR1-201ENST00000244763 NRG2O14511 850 aaPredicted RBP6.71□□□□□ -1.34
SSR1-201ENST00000244763 SBK2P0C263 348 aa6.71□□□□□ -1.34
SSR1-201ENST00000244763 CD1EP15812 388 aa6.71□□□□□ -1.34
SSR1-201ENST00000244763 SSPNQ14714 243 aa6.71□□□□□ -1.34
SSR1-201ENST00000244763 CLPPQ16740 277 aaPredicted RBP6.71□□□□□ -1.34
SSR1-201ENST00000244763 TATDN3Q17R31 274 aa6.71□□□□□ -1.34
SSR1-201ENST00000244763 FAM199XQ6PEV8 388 aaPredicted RBP6.71□□□□□ -1.34
SSR1-201ENST00000244763 NIPSNAP3BQ9BS92 247 aa6.71□□□□□ -1.34
SSR1-201ENST00000244763 MED20Q9H944 212 aa6.71□□□□□ -1.34
SSR1-201ENST00000244763 PDFQ9HBH1 243 aa6.71□□□□□ -1.34
SSR1-201ENST00000244763 COPS3Q9UNS2 423 aa6.71□□□□□ -1.34
SSR1-201ENST00000244763 ZDHHC11BP0C7U3 371 aa6.7□□□□□ -1.34
SSR1-201ENST00000244763 PIPP12273 146 aaPredicted RBP6.7□□□□□ -1.34
SSR1-201ENST00000244763 SNRPD2P62316 118 aaKnown RBP6.7□□□□□ -1.34
SSR1-201ENST00000244763 OR2G6Q5TZ20 316 aa6.7□□□□□ -1.34
SSR1-201ENST00000244763 BTLAQ7Z6A9 289 aa6.7□□□□□ -1.34
SSR1-201ENST00000244763 MITD1Q8WV92 249 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms