RNA–Protein interactions for RNA: ENST00000237289.8

TNFAIP3-201, Transcript of TNF alpha induced protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFAIP3, Length 4,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-201ENST00000237289 A0A0G2JNJ9 132 aa9.82□□□□□ -0.84
TNFAIP3-201ENST00000237289 J3QKU1 62 aa9.82□□□□□ -0.84
TNFAIP3-201ENST00000237289 ADAM10O14672 748 aa9.82□□□□□ -0.84
TNFAIP3-201ENST00000237289 TPD52L2O43399 206 aaKnown RBP9.82□□□□□ -0.84
TNFAIP3-201ENST00000237289 WISP2O76076 250 aa9.82□□□□□ -0.84
TNFAIP3-201ENST00000237289 IGHMP01871 453 aa9.82□□□□□ -0.84
TNFAIP3-201ENST00000237289 DBTP11182 482 aaKnown RBP9.82□□□□□ -0.84
TNFAIP3-201ENST00000237289 TBRG1Q3YBR2 411 aa9.82□□□□□ -0.84
TNFAIP3-201ENST00000237289 OTPQ5XKR4 325 aa9.82□□□□□ -0.84
TNFAIP3-201ENST00000237289 NCCRP1Q6ZVX7 275 aaPredicted RBP9.82□□□□□ -0.84
TNFAIP3-201ENST00000237289 SSX8Q7RTT4 187 aa9.82□□□□□ -0.84
TNFAIP3-201ENST00000237289 HTRA1Q92743 480 aa9.82□□□□□ -0.84
TNFAIP3-201ENST00000237289 HIST1H2AAQ96QV6 131 aa9.82□□□□□ -0.84
TNFAIP3-201ENST00000237289 TMEM38BQ9NVV0 291 aa9.82□□□□□ -0.84
TNFAIP3-201ENST00000237289 VSX1Q9NZR4 365 aaPredicted RBP9.82□□□□□ -0.84
TNFAIP3-201ENST00000237289 Q9UFV3 132 aa9.82□□□□□ -0.84
TNFAIP3-201ENST00000237289 MYO15AQ9UKN7 3530 aa9.82□□□□□ -0.84
TNFAIP3-201ENST00000237289 LOC110117498-PIK3R3F6TDL0 507 aa9.82□□□□□ -0.84
TNFAIP3-201ENST00000237289 CNOT4O95628 575 aaKnown RBP9.82□□□□□ -0.84
TNFAIP3-201ENST00000237289 SBK2P0C263 348 aa9.82□□□□□ -0.84
TNFAIP3-201ENST00000237289 KIR2DL2P43627 348 aaPredicted RBP9.82□□□□□ -0.84
TNFAIP3-201ENST00000237289 ZNF83P51522 516 aa9.82□□□□□ -0.84
TNFAIP3-201ENST00000237289 PPA1Q15181 289 aa9.82□□□□□ -0.84
TNFAIP3-201ENST00000237289 MARVELD2Q8N4S9 558 aa9.82□□□□□ -0.84
TNFAIP3-201ENST00000237289 ALG8Q9BVK2 526 aa9.82□□□□□ -0.84
TNFAIP3-201ENST00000237289 INPP5EQ9NRR6 644 aa9.82□□□□□ -0.84
TNFAIP3-201ENST00000237289 PYCARD-AS1I3L0S3 204 aa9.81□□□□□ -0.84
TNFAIP3-201ENST00000237289 CLDN14O95500 239 aa9.81□□□□□ -0.84
TNFAIP3-201ENST00000237289 CD8BP10966 210 aa9.81□□□□□ -0.84
TNFAIP3-201ENST00000237289 MRPS34P82930 218 aaKnown RBP9.81□□□□□ -0.84
TNFAIP3-201ENST00000237289 TSC22D1Q15714 1073 aa9.81□□□□□ -0.84
TNFAIP3-201ENST00000237289 ODF4Q2M2E3 257 aa9.81□□□□□ -0.84
TNFAIP3-201ENST00000237289 HIKESHIQ53FT3 197 aa9.81□□□□□ -0.84
TNFAIP3-201ENST00000237289 VHLLQ6RSH7 139 aa9.81□□□□□ -0.84
TNFAIP3-201ENST00000237289 SLC22A25Q6T423 547 aa9.81□□□□□ -0.84
TNFAIP3-201ENST00000237289 RPRMLQ8N4K4 120 aa9.81□□□□□ -0.84
TNFAIP3-201ENST00000237289 ZNF808Q8N4W9 903 aaPredicted RBP9.81□□□□□ -0.84
TNFAIP3-201ENST00000237289 ZNF519Q8TB69 540 aa9.81□□□□□ -0.84
TNFAIP3-201ENST00000237289 SLITRK2Q9H156 845 aa9.81□□□□□ -0.84
TNFAIP3-201ENST00000237289 ELOVL3Q9HB03 270 aa9.81□□□□□ -0.84
TNFAIP3-201ENST00000237289 POLE4Q9NR33 117 aa9.81□□□□□ -0.84
TNFAIP3-201ENST00000237289 CNOT2Q9NZN8 540 aaKnown RBP9.81□□□□□ -0.84
TNFAIP3-201ENST00000237289 PCDHGB5Q9Y5G0 923 aa9.81□□□□□ -0.84
TNFAIP3-201ENST00000237289 FREM3P0C091 2139 aa9.81□□□□□ -0.84
TNFAIP3-201ENST00000237289 CACNA1CQ13936 2221 aa9.81□□□□□ -0.84
TNFAIP3-201ENST00000237289 A0A1B0GVI7 797 aa9.81□□□□□ -0.84
TNFAIP3-201ENST00000237289 SERPINA3P01011 423 aa9.81□□□□□ -0.84
TNFAIP3-201ENST00000237289 RPS27P42677 84 aaKnown RBP9.81□□□□□ -0.84
TNFAIP3-201ENST00000237289 ISL1P61371 349 aa9.81□□□□□ -0.84
TNFAIP3-201ENST00000237289 CCDC120Q96HB5 630 aa9.81□□□□□ -0.84
TNFAIP3-201ENST00000237289 NIPAL2Q9H841 368 aa9.81□□□□□ -0.84
TNFAIP3-201ENST00000237289 CD2P06729 351 aa9.81□□□□□ -0.84
TNFAIP3-201ENST00000237289 UQCRFS1P47985 274 aa9.81□□□□□ -0.84
TNFAIP3-201ENST00000237289 TAS2R43P59537 309 aa9.81□□□□□ -0.84
TNFAIP3-201ENST00000237289 TMEM108Q6UXF1 575 aa9.81□□□□□ -0.84
TNFAIP3-201ENST00000237289 TFAP2EQ6VUC0 442 aa9.81□□□□□ -0.84
TNFAIP3-201ENST00000237289 ZNF416Q9BWM5 594 aa9.81□□□□□ -0.84
TNFAIP3-201ENST00000237289 FAM215AQ9Y5M1 114 aa9.81□□□□□ -0.84
TNFAIP3-201ENST00000237289 PCNX1Q96RV3 2341 aa9.81□□□□□ -0.84
TNFAIP3-201ENST00000237289 GTF3C1Q12789 2109 aa9.81□□□□□ -0.84
TNFAIP3-201ENST00000237289 ZNF878C9JN71 531 aa9.81□□□□□ -0.84
TNFAIP3-201ENST00000237289 ZNF32P17041 273 aa9.81□□□□□ -0.84
TNFAIP3-201ENST00000237289 GNALP38405 381 aa9.81□□□□□ -0.84
TNFAIP3-201ENST00000237289 GRB2P62993 217 aaKnown RBP9.81□□□□□ -0.84
TNFAIP3-201ENST00000237289 FAM27E3Q08E93 113 aa9.81□□□□□ -0.84
TNFAIP3-201ENST00000237289 TP53I3Q53FA7 332 aa9.81□□□□□ -0.84
TNFAIP3-201ENST00000237289 FAM122BQ7Z309 247 aa9.81□□□□□ -0.84
TNFAIP3-201ENST00000237289 KCTD20Q7Z5Y7 419 aa9.81□□□□□ -0.84
TNFAIP3-201ENST00000237289 ZNF843Q8N446 348 aa9.81□□□□□ -0.84
TNFAIP3-201ENST00000237289 LRRC75AQ8NAA5 344 aa9.81□□□□□ -0.84
TNFAIP3-201ENST00000237289 AKR7LQ8NHP1 331 aa9.81□□□□□ -0.84
TNFAIP3-201ENST00000237289 STARD4Q96DR4 205 aa9.81□□□□□ -0.84
TNFAIP3-201ENST00000237289 HDHD2Q9H0R4 259 aa9.81□□□□□ -0.84
TNFAIP3-201ENST00000237289 PLSCR4Q9NRQ2 329 aa9.81□□□□□ -0.84
TNFAIP3-201ENST00000237289 GDF2Q9UK05 429 aaPredicted RBP9.81□□□□□ -0.84
TNFAIP3-201ENST00000237289 FAM208BQ5VWN6 2430 aa9.8□□□□□ -0.84
TNFAIP3-201ENST00000237289 TMEM269A0A1B0GVZ9 245 aa9.8□□□□□ -0.84
TNFAIP3-201ENST00000237289 PRSS44E7EML9 344 aa9.8□□□□□ -0.84
TNFAIP3-201ENST00000237289 GPANK1O95872 356 aa9.8□□□□□ -0.84
TNFAIP3-201ENST00000237289 PATE4P0C8F1 98 aa9.8□□□□□ -0.84
TNFAIP3-201ENST00000237289 LSM6P62312 80 aaKnown RBP9.8□□□□□ -0.84
TNFAIP3-201ENST00000237289 SFRP5Q5T4F7 317 aa9.8□□□□□ -0.84
TNFAIP3-201ENST00000237289 GPR141Q7Z602 305 aa9.8□□□□□ -0.84
TNFAIP3-201ENST00000237289 UFD1Q92890 307 aa9.8□□□□□ -0.84
TNFAIP3-201ENST00000237289 SLAMF6Q96DU3 332 aa9.8□□□□□ -0.84
TNFAIP3-201ENST00000237289 OR10A2Q9H208 303 aa9.8□□□□□ -0.84
TNFAIP3-201ENST00000237289 ESRP2Q9H6T0 727 aaKnown RBP9.8□□□□□ -0.84
TNFAIP3-201ENST00000237289 RHBDL2Q9NX52 303 aa9.8□□□□□ -0.84
TNFAIP3-201ENST00000237289 ERVK-18Q9QC07 812 aa9.8□□□□□ -0.84
TNFAIP3-201ENST00000237289 C5orf49A4QMS7 147 aa9.8□□□□□ -0.84
TNFAIP3-201ENST00000237289 GGT3PA6NGU5 568 aa9.8□□□□□ -0.84
TNFAIP3-201ENST00000237289 MPZL1O95297 269 aa9.8□□□□□ -0.84
TNFAIP3-201ENST00000237289 BCL2L15Q5TBC7 163 aa9.8□□□□□ -0.84
TNFAIP3-201ENST00000237289 MRPL21Q7Z2W9 205 aaKnown RBP9.8□□□□□ -0.84
TNFAIP3-201ENST00000237289 ZIC4Q8N9L1 334 aa9.8□□□□□ -0.84
TNFAIP3-201ENST00000237289 FCGR1BQ92637 280 aa9.8□□□□□ -0.84
TNFAIP3-201ENST00000237289 GGHQ92820 318 aa9.8□□□□□ -0.84
TNFAIP3-201ENST00000237289 PTP4A1Q93096 173 aa9.8□□□□□ -0.84
TNFAIP3-201ENST00000237289 TMEM54Q969K7 222 aa9.8□□□□□ -0.84
TNFAIP3-201ENST00000237289 ATF6BQ99941 703 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms