RNA–Protein interactions for RNA: ENST00000233025.11

SPCS1-201, Transcript of signal peptidase complex subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SPCS1, Length 1,082 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS1-201ENST00000233025 XPNPEP2O43895 674 aa13.67□□□□□ -0.22
SPCS1-201ENST00000233025 TSPAN9O75954 239 aa13.67□□□□□ -0.22
SPCS1-201ENST00000233025 PPP1R3DO95685 299 aa13.67□□□□□ -0.22
SPCS1-201ENST00000233025 WNT2P09544 360 aa13.67□□□□□ -0.22
SPCS1-201ENST00000233025 HERPUD1Q15011 391 aa13.67□□□□□ -0.22
SPCS1-201ENST00000233025 FAM69AQ5T7M9 428 aa13.67□□□□□ -0.22
SPCS1-201ENST00000233025 FOXB2Q5VYV0 432 aa13.67□□□□□ -0.22
SPCS1-201ENST00000233025 DHRS4L2Q6PKH6 230 aa13.67□□□□□ -0.22
SPCS1-201ENST00000233025 NFKBIDQ8NI38 313 aa13.67□□□□□ -0.22
SPCS1-201ENST00000233025 ZNF417Q8TAU3 575 aa13.67□□□□□ -0.22
SPCS1-201ENST00000233025 STON2Q8WXE9 905 aa13.67□□□□□ -0.22
SPCS1-201ENST00000233025 TAAR8Q969N4 342 aa13.67□□□□□ -0.22
SPCS1-201ENST00000233025 MARS2Q96GW9 593 aaKnown RBP13.67□□□□□ -0.22
SPCS1-201ENST00000233025 ZNF587Q96SQ5 575 aaPredicted RBP13.67□□□□□ -0.22
SPCS1-201ENST00000233025 EMC6Q9BV81 110 aa13.67□□□□□ -0.22
SPCS1-201ENST00000233025 ULBP2Q9BZM5 246 aa13.67□□□□□ -0.22
SPCS1-201ENST00000233025 RAD21L1Q9H4I0 556 aa13.67□□□□□ -0.22
SPCS1-201ENST00000233025 IKZF5Q9H5V7 419 aa13.67□□□□□ -0.22
SPCS1-201ENST00000233025 CACYBPQ9HB71 228 aaKnown RBP13.67□□□□□ -0.22
SPCS1-201ENST00000233025 B3GAT2Q9NPZ5 323 aa13.67□□□□□ -0.22
SPCS1-201ENST00000233025 VAPAQ9P0L0 249 aa13.67□□□□□ -0.22
SPCS1-201ENST00000233025 GMEB1Q9Y692 573 aa13.67□□□□□ -0.22
SPCS1-201ENST00000233025 KIR2DS1A0A191URI9 304 aa13.66□□□□□ -0.22
SPCS1-201ENST00000233025 PLSCR5A0PG75 271 aa13.66□□□□□ -0.22
SPCS1-201ENST00000233025 AIM2O14862 343 aa13.66□□□□□ -0.22
SPCS1-201ENST00000233025 TPST1O60507 370 aa13.66□□□□□ -0.22
SPCS1-201ENST00000233025 DNAJC8O75937 253 aaPredicted RBP13.66□□□□□ -0.22
SPCS1-201ENST00000233025 GTF2E2P29084 291 aaKnown RBP13.66□□□□□ -0.22
SPCS1-201ENST00000233025 MPV17P39210 176 aa13.66□□□□□ -0.22
SPCS1-201ENST00000233025 IDH3AP50213 366 aa13.66□□□□□ -0.22
SPCS1-201ENST00000233025 FGF12P61328 243 aa13.66□□□□□ -0.22
SPCS1-201ENST00000233025 KRT72Q14CN4 511 aa13.66□□□□□ -0.22
SPCS1-201ENST00000233025 PAGE3Q5JUK9 113 aa13.66□□□□□ -0.22
SPCS1-201ENST00000233025 GCNT6Q5T4J0 391 aa13.66□□□□□ -0.22
SPCS1-201ENST00000233025 METTL21CQ5VZV1 264 aa13.66□□□□□ -0.22
SPCS1-201ENST00000233025 FAM91A1Q658Y4 838 aa13.66□□□□□ -0.22
SPCS1-201ENST00000233025 GDPGP1Q6ZNW5 385 aa13.66□□□□□ -0.22
SPCS1-201ENST00000233025 ADPRHL1Q8NDY3 354 aa13.66□□□□□ -0.22
SPCS1-201ENST00000233025 NSL1Q96IY1 281 aa13.66□□□□□ -0.22
SPCS1-201ENST00000233025 EBF4Q9BQW3 602 aa13.66□□□□□ -0.22
SPCS1-201ENST00000233025 C1orf198Q9H425 327 aa13.66□□□□□ -0.22
SPCS1-201ENST00000233025 MRGBPQ9NV56 204 aa13.66□□□□□ -0.22
SPCS1-201ENST00000233025 CAPN7Q9Y6W3 813 aa13.66□□□□□ -0.22
SPCS1-201ENST00000233025 ZNF816-ZNF321PA0A0X1KG74 233 aa13.65□□□□□ -0.22
SPCS1-201ENST00000233025 HPRP00739 348 aa13.65□□□□□ -0.22
SPCS1-201ENST00000233025 HLA-DOBP13765 273 aa13.65□□□□□ -0.22
SPCS1-201ENST00000233025 GRPRP30550 384 aa13.65□□□□□ -0.22
SPCS1-201ENST00000233025 MDH2P40926 338 aaKnown RBP13.65□□□□□ -0.22
SPCS1-201ENST00000233025 IER3P46695 156 aa13.65□□□□□ -0.22
SPCS1-201ENST00000233025 TBC1D28Q2M2D7 210 aa13.65□□□□□ -0.22
SPCS1-201ENST00000233025 C5orf46Q6UWT4 87 aa13.65□□□□□ -0.22
SPCS1-201ENST00000233025 NHLRC1Q6VVB1 395 aa13.65□□□□□ -0.22
SPCS1-201ENST00000233025 Q6ZTK2 550 aa13.65□□□□□ -0.22
SPCS1-201ENST00000233025 PIWIL3Q7Z3Z3 882 aaKnown RBP13.65□□□□□ -0.22
SPCS1-201ENST00000233025 SNX32Q86XE0 403 aa13.65□□□□□ -0.22
SPCS1-201ENST00000233025 LDLRAD3Q86YD5 345 aa13.65□□□□□ -0.22
SPCS1-201ENST00000233025 OR1J1Q8NGS3 322 aa13.65□□□□□ -0.22
SPCS1-201ENST00000233025 SLC38A4Q969I6 547 aa13.65□□□□□ -0.22
SPCS1-201ENST00000233025 SLC41A3Q96GZ6 507 aa13.65□□□□□ -0.22
SPCS1-201ENST00000233025 RAB3IPQ96QF0 476 aaPredicted RBP13.65□□□□□ -0.22
SPCS1-201ENST00000233025 WFDC6Q9BQY6 131 aa13.65□□□□□ -0.22
SPCS1-201ENST00000233025 CCDC28BQ9BUN5 200 aa13.65□□□□□ -0.22
SPCS1-201ENST00000233025 TOR3AQ9H497 397 aa13.65□□□□□ -0.22
SPCS1-201ENST00000233025 NANOGQ9H9S0 305 aa13.65□□□□□ -0.22
SPCS1-201ENST00000233025 TRAV36DV7A0A075B6V5 113 aa13.64□□□□□ -0.23
SPCS1-201ENST00000233025 C5orf58C9J3I9 102 aa13.64□□□□□ -0.23
SPCS1-201ENST00000233025 OR2T1O43869 369 aa13.64□□□□□ -0.23
SPCS1-201ENST00000233025 TPST2O60704 377 aa13.64□□□□□ -0.23
SPCS1-201ENST00000233025 CALB2P22676 271 aa13.64□□□□□ -0.23
SPCS1-201ENST00000233025 STX1BP61266 288 aa13.64□□□□□ -0.23
SPCS1-201ENST00000233025 NCALDP61601 193 aa13.64□□□□□ -0.23
SPCS1-201ENST00000233025 CDK6Q00534 326 aa13.64□□□□□ -0.23
SPCS1-201ENST00000233025 ALG10BQ5I7T1 473 aa13.64□□□□□ -0.23
SPCS1-201ENST00000233025 SPATA46Q5T0L3 261 aa13.64□□□□□ -0.23
SPCS1-201ENST00000233025 DHRS7BQ6IAN0 325 aaPredicted RBP13.64□□□□□ -0.23
SPCS1-201ENST00000233025 MUC20Q8N307 709 aaPredicted RBP13.64□□□□□ -0.23
SPCS1-201ENST00000233025 SLC22A24Q8N4F4 322 aa13.64□□□□□ -0.23
SPCS1-201ENST00000233025 DNAJA4Q8WW22 397 aaPredicted RBP13.64□□□□□ -0.23
SPCS1-201ENST00000233025 CFHR4Q92496 578 aa13.64□□□□□ -0.23
SPCS1-201ENST00000233025 SPDL1Q96EA4 605 aa13.64□□□□□ -0.23
SPCS1-201ENST00000233025 ARHGDIGQ99819 225 aa13.64□□□□□ -0.23
SPCS1-201ENST00000233025 NUDT16L1Q9BRJ7 211 aaKnown RBP13.64□□□□□ -0.23
SPCS1-201ENST00000233025 CYSLTR2Q9NS75 346 aa13.64□□□□□ -0.23
SPCS1-201ENST00000233025 CCDC167Q9P0B6 97 aa13.64□□□□□ -0.23
SPCS1-201ENST00000233025 RPS6KB2Q9UBS0 482 aa13.64□□□□□ -0.23
SPCS1-201ENST00000233025 ZDHHC8Q9ULC8 765 aa13.64□□□□□ -0.23
SPCS1-201ENST00000233025 A0A0B4J2E0 115 aa13.63□□□□□ -0.23
SPCS1-201ENST00000233025 A0A1B0GX12 115 aa13.63□□□□□ -0.23
SPCS1-201ENST00000233025 BGLAPP02818 100 aa13.63□□□□□ -0.23
SPCS1-201ENST00000233025 RPS2P15880 293 aaKnown RBP13.63□□□□□ -0.23
SPCS1-201ENST00000233025 CBLP22681 906 aa13.63□□□□□ -0.23
SPCS1-201ENST00000233025 CPT2P23786 658 aa13.63□□□□□ -0.23
SPCS1-201ENST00000233025 MNAT1P51948 309 aa13.63□□□□□ -0.23
SPCS1-201ENST00000233025 GNB2P62879 340 aa13.63□□□□□ -0.23
SPCS1-201ENST00000233025 TNFAIP6P98066 277 aaPredicted RBP13.63□□□□□ -0.23
SPCS1-201ENST00000233025 MBNL2Q5VZF2 373 aaKnown RBP13.63□□□□□ -0.23
SPCS1-201ENST00000233025 REEP3Q6NUK4 255 aa13.63□□□□□ -0.23
SPCS1-201ENST00000233025 H1FNTQ75WM6 255 aaPredicted RBP13.63□□□□□ -0.23
SPCS1-201ENST00000233025 KLBQ86Z14 1044 aa13.63□□□□□ -0.23
SPCS1-201ENST00000233025 UEVLDQ8IX04 471 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms