RNA–Protein interactions for RNA: ENST00000216774.10

SRP54-201, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRP54, Length 2,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-201ENST00000216774 OR4E1P0C645 316 aa11.97□□□□□ -0.49
SRP54-201ENST00000216774 CTLA4P16410 223 aa11.97□□□□□ -0.49
SRP54-201ENST00000216774 MPGP29372 298 aa11.97□□□□□ -0.49
SRP54-201ENST00000216774 AGTR1P30556 359 aa11.97□□□□□ -0.49
SRP54-201ENST00000216774 GLO1Q04760 184 aa11.97□□□□□ -0.49
SRP54-201ENST00000216774 EIF2B1Q14232 305 aaKnown RBP11.97□□□□□ -0.49
SRP54-201ENST00000216774 EBPQ15125 230 aaKnown RBP11.97□□□□□ -0.49
SRP54-201ENST00000216774 TUSC1Q2TAM9 212 aa11.97□□□□□ -0.49
SRP54-201ENST00000216774 ADGRE4PQ86SQ3 457 aa11.97□□□□□ -0.49
SRP54-201ENST00000216774 C12orf45Q8N5I9 185 aaPredicted RBP11.97□□□□□ -0.49
SRP54-201ENST00000216774 OR52N5Q8NH56 324 aa11.97□□□□□ -0.49
SRP54-201ENST00000216774 DUSP19Q8WTR2 217 aa11.97□□□□□ -0.49
SRP54-201ENST00000216774 TSLPQ969D9 159 aa11.97□□□□□ -0.49
SRP54-201ENST00000216774 PTX4Q96A99 478 aa11.97□□□□□ -0.49
SRP54-201ENST00000216774 TGM7Q96PF1 710 aa11.97□□□□□ -0.49
SRP54-201ENST00000216774 ABHD6Q9BV23 337 aa11.97□□□□□ -0.49
SRP54-201ENST00000216774 C1QTNF6Q9BXI9 259 aa11.97□□□□□ -0.49
SRP54-201ENST00000216774 CUTCQ9NTM9 273 aa11.97□□□□□ -0.49
SRP54-201ENST00000216774 LRP12Q9Y561 859 aa11.97□□□□□ -0.49
SRP54-201ENST00000216774 TMED7-TICAM2A0A0A6YYA0 188 aa11.96□□□□□ -0.49
SRP54-201ENST00000216774 NUDT21O43809 227 aaKnown RBP11.96□□□□□ -0.49
SRP54-201ENST00000216774 GMFGO60234 142 aa11.96□□□□□ -0.49
SRP54-201ENST00000216774 RAD1O60671 282 aa11.96□□□□□ -0.49
SRP54-201ENST00000216774 CRABP1P29762 137 aa11.96□□□□□ -0.49
SRP54-201ENST00000216774 CAPZA1P52907 286 aa11.96□□□□□ -0.49
SRP54-201ENST00000216774 GFERP55789 205 aa11.96□□□□□ -0.49
SRP54-201ENST00000216774 SORDQ00796 357 aa11.96□□□□□ -0.49
SRP54-201ENST00000216774 DLX2Q07687 328 aaPredicted RBP11.96□□□□□ -0.49
SRP54-201ENST00000216774 FGL1Q08830 312 aa11.96□□□□□ -0.49
SRP54-201ENST00000216774 SHHQ15465 462 aa11.96□□□□□ -0.49
SRP54-201ENST00000216774 C1orf140Q5VVS0 124 aa11.96□□□□□ -0.49
SRP54-201ENST00000216774 HLA-DQA1Q5Y7H0 255 aa11.96□□□□□ -0.49
SRP54-201ENST00000216774 TMEM81Q6P7N7 255 aa11.96□□□□□ -0.49
SRP54-201ENST00000216774 ZNF627Q7L945 461 aa11.96□□□□□ -0.49
SRP54-201ENST00000216774 BVESQ8NE79 360 aa11.96□□□□□ -0.49
SRP54-201ENST00000216774 MVB12AQ96EY5 273 aa11.96□□□□□ -0.49
SRP54-201ENST00000216774 NUDT9Q9BW91 350 aa11.96□□□□□ -0.49
SRP54-201ENST00000216774 TAS2R4Q9NYW5 299 aa11.96□□□□□ -0.49
SRP54-201ENST00000216774 TMED7Q9Y3B3 224 aa11.96□□□□□ -0.49
SRP54-201ENST00000216774 R4GMQ9 66 aa11.96□□□□□ -0.49
SRP54-201ENST00000216774 PLPP3O14495 311 aa11.95□□□□□ -0.5
SRP54-201ENST00000216774 LDLRAD4O15165 306 aa11.95□□□□□ -0.5
SRP54-201ENST00000216774 SRSF10O75494 262 aaKnown RBP11.95□□□□□ -0.5
SRP54-201ENST00000216774 CYB5AP00167 134 aa11.95□□□□□ -0.5
SRP54-201ENST00000216774 CD8AP01732 235 aa11.95□□□□□ -0.5
SRP54-201ENST00000216774 CD74P04233 296 aa11.95□□□□□ -0.5
SRP54-201ENST00000216774 ISG15P05161 165 aa11.95□□□□□ -0.5
SRP54-201ENST00000216774 PLCXD2Q0VAA5 305 aa11.95□□□□□ -0.5
SRP54-201ENST00000216774 LY6G6FQ5SQ64 297 aa11.95□□□□□ -0.5
SRP54-201ENST00000216774 LPCAT3Q6P1A2 487 aa11.95□□□□□ -0.5
SRP54-201ENST00000216774 C5orf46Q6UWT4 87 aa11.95□□□□□ -0.5
SRP54-201ENST00000216774 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.95□□□□□ -0.5
SRP54-201ENST00000216774 C9orf40Q8IXQ3 194 aa11.95□□□□□ -0.5
SRP54-201ENST00000216774 OR1S1Q8NH92 325 aa11.95□□□□□ -0.5
SRP54-201ENST00000216774 PPP1R14AQ96A00 147 aa11.95□□□□□ -0.5
SRP54-201ENST00000216774 SLC25A44Q96H78 314 aaPredicted RBP11.95□□□□□ -0.5
SRP54-201ENST00000216774 FOXN4Q96NZ1 517 aa11.95□□□□□ -0.5
SRP54-201ENST00000216774 EDEM2Q9BV94 578 aa11.95□□□□□ -0.5
SRP54-201ENST00000216774 HHLA2Q9UM44 414 aa11.95□□□□□ -0.5
SRP54-201ENST00000216774 A0A1B0GW55 424 aa11.95□□□□□ -0.5
SRP54-201ENST00000216774 LOC390937A0A1W2PQ73 354 aa11.95□□□□□ -0.5
SRP54-201ENST00000216774 TCRBV16S1A1N1A0A5B0 115 aa11.95□□□□□ -0.5
SRP54-201ENST00000216774 POM121CA8CG34 1229 aa11.95□□□□□ -0.5
SRP54-201ENST00000216774 ZNF736B4DX44 427 aaPredicted RBP11.95□□□□□ -0.5
SRP54-201ENST00000216774 AMY2AP04746 511 aa11.95□□□□□ -0.5
SRP54-201ENST00000216774 UBBP0CG47 229 aa11.95□□□□□ -0.5
SRP54-201ENST00000216774 UBCP0CG48 685 aaKnown RBP11.95□□□□□ -0.5
SRP54-201ENST00000216774 DUX4L2P0CJ85 424 aa11.95□□□□□ -0.5
SRP54-201ENST00000216774 DUX4L3P0CJ86 424 aa11.95□□□□□ -0.5
SRP54-201ENST00000216774 DUX4L4P0CJ87 422 aa11.95□□□□□ -0.5
SRP54-201ENST00000216774 DUX4L5P0CJ88 424 aa11.95□□□□□ -0.5
SRP54-201ENST00000216774 DUX4L6P0CJ89 424 aa11.95□□□□□ -0.5
SRP54-201ENST00000216774 DUX4L7P0CJ90 424 aa11.95□□□□□ -0.5
SRP54-201ENST00000216774 MGMTP16455 207 aa11.95□□□□□ -0.5
SRP54-201ENST00000216774 MAOBP27338 520 aa11.95□□□□□ -0.5
SRP54-201ENST00000216774 NR0B1P51843 470 aaKnown RBP11.95□□□□□ -0.5
SRP54-201ENST00000216774 PNLIPRP2P54317 469 aa11.95□□□□□ -0.5
SRP54-201ENST00000216774 RPS27AP62979 156 aaKnown RBP11.95□□□□□ -0.5
SRP54-201ENST00000216774 UBA52P62987 128 aaKnown RBP11.95□□□□□ -0.5
SRP54-201ENST00000216774 SRSF4Q08170 494 aaKnown RBP11.95□□□□□ -0.5
SRP54-201ENST00000216774 C1orf100Q5SVJ3 147 aa11.95□□□□□ -0.5
SRP54-201ENST00000216774 OTPQ5XKR4 325 aa11.95□□□□□ -0.5
SRP54-201ENST00000216774 TTLL10Q6ZVT0 673 aa11.95□□□□□ -0.5
SRP54-201ENST00000216774 GRINAQ7Z429 371 aa11.95□□□□□ -0.5
SRP54-201ENST00000216774 GKN2Q86XP6 184 aa11.95□□□□□ -0.5
SRP54-201ENST00000216774 NKAIN3Q8N8D7 197 aa11.95□□□□□ -0.5
SRP54-201ENST00000216774 STK35Q8TDR2 534 aa11.95□□□□□ -0.5
SRP54-201ENST00000216774 NRSN2Q9GZP1 204 aa11.95□□□□□ -0.5
SRP54-201ENST00000216774 SLC25A32Q9H2D1 315 aa11.95□□□□□ -0.5
SRP54-201ENST00000216774 DUX4Q9UBX2 424 aa11.95□□□□□ -0.5
SRP54-201ENST00000216774 MRPS18BQ9Y676 258 aaKnown RBP11.95□□□□□ -0.5
SRP54-201ENST00000216774 SLCO1B1Q9Y6L6 691 aa11.95□□□□□ -0.5
SRP54-201ENST00000216774 SPTBP11277 2137 aa11.95□□□□□ -0.5
SRP54-201ENST00000216774 TRAV14DV4A0A0A6YYC5 116 aa11.94□□□□□ -0.5
SRP54-201ENST00000216774 A0A0D9SG52 128 aa11.94□□□□□ -0.5
SRP54-201ENST00000216774 CDK2AP1O14519 115 aa11.94□□□□□ -0.5
SRP54-201ENST00000216774 SDC3O75056 442 aa11.94□□□□□ -0.5
SRP54-201ENST00000216774 ACHEP22303 614 aa11.94□□□□□ -0.5
SRP54-201ENST00000216774 OR1D4P47884 311 aa11.94□□□□□ -0.5
SRP54-201ENST00000216774 DNASE1L1P49184 302 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms