RNA–Protein interactions for RNA: ENST00000641523.1

CASC19-238, Transcript of cancer susceptibility 19, human

BASIC

Gene CASC19, Length 1,558 nt, Biotype lincRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CASC19-238	ENST00000641523	HCFC1	P51610	2035 aa		5.51	□□□□□ -1.53
CASC19-238	ENST00000641523	AKAP9	Q99996	3911 aa		5.51	□□□□□ -1.53
CASC19-238	ENST00000641523	FREM3	P0C091	2139 aa		5.51	□□□□□ -1.53
CASC19-238	ENST00000641523	MPDZ	O75970	2070 aa		5.51	□□□□□ -1.53
CASC19-238	ENST00000641523	NIPBL	Q6KC79	2804 aa	eCLIP	5.51	□□□□□ -1.53
CASC19-238	ENST00000641523	TMEM114	B3SHH9	223 aa		5.5	□□□□□ -1.53
CASC19-238	ENST00000641523		G3V2L1	256 aa		5.5	□□□□□ -1.53
CASC19-238	ENST00000641523	VCY	O14598	125 aa		5.5	□□□□□ -1.53
CASC19-238	ENST00000641523	PSMG1	O95456	288 aa		5.5	□□□□□ -1.53
CASC19-238	ENST00000641523	NGFR	P08138	427 aa		5.5	□□□□□ -1.53
CASC19-238	ENST00000641523	KRT16	P08779	473 aa		5.5	□□□□□ -1.53
CASC19-238	ENST00000641523	PRPS2	P11908	318 aa		5.5	□□□□□ -1.53
CASC19-238	ENST00000641523	GABRA5	P31644	462 aa		5.5	□□□□□ -1.53
CASC19-238	ENST00000641523	SERPINB5	P36952	375 aa		5.5	□□□□□ -1.53
CASC19-238	ENST00000641523	HPCAL1	P37235	193 aa		5.5	□□□□□ -1.53
CASC19-238	ENST00000641523	PTGDS	P41222	190 aa		5.5	□□□□□ -1.53
CASC19-238	ENST00000641523	ART1	P52961	327 aa		5.5	□□□□□ -1.53
CASC19-238	ENST00000641523	SUCLG1	P53597	346 aa	Known RBP	5.5	□□□□□ -1.53
CASC19-238	ENST00000641523	SELENOV	P59797	346 aa		5.5	□□□□□ -1.53
CASC19-238	ENST00000641523	RAET1L	Q5VY80	246 aa		5.5	□□□□□ -1.53
CASC19-238	ENST00000641523	NCR3LG1	Q68D85	454 aa		5.5	□□□□□ -1.53
CASC19-238	ENST00000641523	NOXRED1	Q6NXP6	359 aa		5.5	□□□□□ -1.53
CASC19-238	ENST00000641523	TMEM107	Q6UX40	140 aa		5.5	□□□□□ -1.53
CASC19-238	ENST00000641523	NANOGNB	Q7Z5D8	188 aa		5.5	□□□□□ -1.53
CASC19-238	ENST00000641523	MISP	Q8IVT2	679 aa		5.5	□□□□□ -1.53
CASC19-238	ENST00000641523	NATD1	Q8N6N6	113 aa		5.5	□□□□□ -1.53
CASC19-238	ENST00000641523	CDRT4	Q8N9R6	151 aa		5.5	□□□□□ -1.53
CASC19-238	ENST00000641523	OR7G2	Q8NG99	324 aa		5.5	□□□□□ -1.53
CASC19-238	ENST00000641523	DNAJA4	Q8WW22	397 aa	Predicted RBP	5.5	□□□□□ -1.53
CASC19-238	ENST00000641523	OTULIN	Q96BN8	352 aa		5.5	□□□□□ -1.53
CASC19-238	ENST00000641523	EFHD2	Q96C19	240 aa	Predicted RBP	5.5	□□□□□ -1.53
CASC19-238	ENST00000641523	PPCDC	Q96CD2	204 aa		5.5	□□□□□ -1.53
CASC19-238	ENST00000641523	MTERF3	Q96E29	417 aa		5.5	□□□□□ -1.53
CASC19-238	ENST00000641523	HARBI1	Q96MB7	349 aa		5.5	□□□□□ -1.53
CASC19-238	ENST00000641523	AMDHD1	Q96NU7	426 aa		5.5	□□□□□ -1.53
CASC19-238	ENST00000641523	KCNA7	Q96RP8	456 aa		5.5	□□□□□ -1.53
CASC19-238	ENST00000641523	LMF2	Q9BU23	707 aa	Known RBP	5.5	□□□□□ -1.53
CASC19-238	ENST00000641523	TBL1XR1	Q9BZK7	514 aa		5.5	□□□□□ -1.53
CASC19-238	ENST00000641523	CHMP1A	Q9HD42	196 aa	Predicted RBP	5.5	□□□□□ -1.53
CASC19-238	ENST00000641523	RAB9B	Q9NP90	201 aa		5.5	□□□□□ -1.53
CASC19-238	ENST00000641523	ACSS1	Q9NUB1	689 aa	Predicted RBP	5.5	□□□□□ -1.53
CASC19-238	ENST00000641523	PAQR5	Q9NXK6	330 aa	Predicted RBP	5.5	□□□□□ -1.53
CASC19-238	ENST00000641523	EMCN	Q9ULC0	261 aa		5.5	□□□□□ -1.53
CASC19-238	ENST00000641523	FOXA2	Q9Y261	457 aa	Predicted RBP	5.5	□□□□□ -1.53
CASC19-238	ENST00000641523	ZNF175	Q9Y473	711 aa		5.5	□□□□□ -1.53
CASC19-238	ENST00000641523	POLR3H	Q9Y535	204 aa	Predicted RBP	5.5	□□□□□ -1.53
CASC19-238	ENST00000641523	ARID1A	O14497	2285 aa		5.5	□□□□□ -1.53
CASC19-238	ENST00000641523	JMJD1C	Q15652	2540 aa		5.5	□□□□□ -1.53
CASC19-238	ENST00000641523	DOCK7	Q96N67	2140 aa		5.5	□□□□□ -1.53
CASC19-238	ENST00000641523	ARHGAP21	Q5T5U3	1957 aa		5.5	□□□□□ -1.53
CASC19-238	ENST00000641523	EXPH5	Q8NEV8	1989 aa		5.5	□□□□□ -1.53
CASC19-238	ENST00000641523	UQCRHL	A0A096LP55	91 aa		5.5	□□□□□ -1.53
CASC19-238	ENST00000641523	TMEM272	A0A1B0GTI8	110 aa		5.5	□□□□□ -1.53
CASC19-238	ENST00000641523	FAM90A10P	A6NDY2	464 aa		5.5	□□□□□ -1.53
CASC19-238	ENST00000641523	HELT	A6NFD8	242 aa		5.5	□□□□□ -1.53
CASC19-238	ENST00000641523	SLC22A20	A6NK97	555 aa		5.5	□□□□□ -1.53
CASC19-238	ENST00000641523	SMIM23	A6NLE4	172 aa		5.5	□□□□□ -1.53
CASC19-238	ENST00000641523	WRB	O00258	174 aa		5.5	□□□□□ -1.53
CASC19-238	ENST00000641523	UPK1A	O00322	258 aa		5.5	□□□□□ -1.53
CASC19-238	ENST00000641523	UBFD1	O14562	309 aa	Known RBP	5.5	□□□□□ -1.53
CASC19-238	ENST00000641523	CASK	O14936	926 aa		5.5	□□□□□ -1.53
CASC19-238	ENST00000641523	SCO2	O43819	266 aa		5.5	□□□□□ -1.53
CASC19-238	ENST00000641523	FADS1	O60427	444 aa		5.5	□□□□□ -1.53
CASC19-238	ENST00000641523	KDM4B	O94953	1096 aa		5.5	□□□□□ -1.53
CASC19-238	ENST00000641523	NDUFB8	O95169	186 aa		5.5	□□□□□ -1.53
CASC19-238	ENST00000641523	SPP1	P10451	314 aa		5.5	□□□□□ -1.53
CASC19-238	ENST00000641523	HPGD	P15428	266 aa		5.5	□□□□□ -1.53
CASC19-238	ENST00000641523	ZNF17	P17021	662 aa		5.5	□□□□□ -1.53
CASC19-238	ENST00000641523	SLCO1A2	P46721	670 aa		5.5	□□□□□ -1.53
CASC19-238	ENST00000641523	COMP	P49747	757 aa	Predicted RBP	5.5	□□□□□ -1.53
CASC19-238	ENST00000641523	LHX2	P50458	406 aa		5.5	□□□□□ -1.53
CASC19-238	ENST00000641523	P2RX3	P56373	397 aa		5.5	□□□□□ -1.53
CASC19-238	ENST00000641523	CTAG1A	P78358	180 aa		5.5	□□□□□ -1.53
CASC19-238	ENST00000641523	SRY	Q05066	204 aa		5.5	□□□□□ -1.53
CASC19-238	ENST00000641523	IFFO1	Q0D2I5	559 aa		5.5	□□□□□ -1.53
CASC19-238	ENST00000641523	NPSR1	Q6W5P4	371 aa		5.5	□□□□□ -1.53
CASC19-238	ENST00000641523	PQLC2	Q6ZP29	291 aa		5.5	□□□□□ -1.53
CASC19-238	ENST00000641523	ERAS	Q7Z444	233 aa		5.5	□□□□□ -1.53
CASC19-238	ENST00000641523	BIVM	Q86UB2	503 aa		5.5	□□□□□ -1.53
CASC19-238	ENST00000641523	KIRREL3	Q8IZU9	778 aa		5.5	□□□□□ -1.53
CASC19-238	ENST00000641523	C9orf106	Q8NAJ2	232 aa		5.5	□□□□□ -1.53
CASC19-238	ENST00000641523	FAM71C	Q8NEG0	241 aa		5.5	□□□□□ -1.53
CASC19-238	ENST00000641523	PRSS3P2	Q8NHM4	247 aa		5.5	□□□□□ -1.53
CASC19-238	ENST00000641523	SMPDL3B	Q92485	455 aa		5.5	□□□□□ -1.53
CASC19-238	ENST00000641523	SLCO4A1	Q96BD0	722 aa		5.5	□□□□□ -1.53
CASC19-238	ENST00000641523	ORAI1	Q96D31	301 aa		5.5	□□□□□ -1.53
CASC19-238	ENST00000641523	SPDL1	Q96EA4	605 aa		5.5	□□□□□ -1.53
CASC19-238	ENST00000641523	PPP3R2	Q96LZ3	170 aa		5.5	□□□□□ -1.53
CASC19-238	ENST00000641523	MS4A4E	Q96PG1	132 aa		5.5	□□□□□ -1.53
CASC19-238	ENST00000641523	FEV	Q99581	238 aa		5.5	□□□□□ -1.53
CASC19-238	ENST00000641523	GPA33	Q99795	319 aa		5.5	□□□□□ -1.53
CASC19-238	ENST00000641523	PCGF1	Q9BSM1	259 aa		5.5	□□□□□ -1.53
CASC19-238	ENST00000641523	RBM24	Q9BX46	236 aa	Known RBP	5.5	□□□□□ -1.53
CASC19-238	ENST00000641523	CXXC4	Q9H2H0	198 aa		5.5	□□□□□ -1.53
CASC19-238	ENST00000641523	GLIPR2	Q9H4G4	154 aa		5.5	□□□□□ -1.53
CASC19-238	ENST00000641523	REEP4	Q9H6H4	257 aa		5.5	□□□□□ -1.53
CASC19-238	ENST00000641523	TMEM231	Q9H6L2	316 aa		5.5	□□□□□ -1.53
CASC19-238	ENST00000641523	HINT3	Q9NQE9	182 aa	Known RBP	5.5	□□□□□ -1.53
CASC19-238	ENST00000641523	YAE1D1	Q9NRH1	226 aa		5.5	□□□□□ -1.53
CASC19-238	ENST00000641523	CLCF1	Q9UBD9	225 aa		5.5	□□□□□ -1.53

Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms