RNA–Protein interactions for RNA: ENST00000638142.2

SYNGAP1-227, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 2,499 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-227ENST00000638142 SLC22A13Q9Y226 551 aa18.14■□□□□ 0.49
SYNGAP1-227ENST00000638142 PRSS37A4D1T9 235 aa18.13■□□□□ 0.49
SYNGAP1-227ENST00000638142 SDC3O75056 442 aa18.13■□□□□ 0.49
SYNGAP1-227ENST00000638142 CD2P06729 351 aa18.13■□□□□ 0.49
SYNGAP1-227ENST00000638142 GABRG2P18507 467 aa18.13■□□□□ 0.49
SYNGAP1-227ENST00000638142 RORAP35398 523 aa18.13■□□□□ 0.49
SYNGAP1-227ENST00000638142 ZNF117Q03924 483 aa18.13■□□□□ 0.49
SYNGAP1-227ENST00000638142 MAMDC2Q7Z304 686 aaPredicted RBP18.13■□□□□ 0.49
SYNGAP1-227ENST00000638142 ZNF321PQ8N8H1 164 aa18.13■□□□□ 0.49
SYNGAP1-227ENST00000638142 ZNF454Q8N9F8 522 aa18.13■□□□□ 0.49
SYNGAP1-227ENST00000638142 DUSP19Q8WTR2 217 aa18.13■□□□□ 0.49
SYNGAP1-227ENST00000638142 PMEPA1Q969W9 287 aa18.13■□□□□ 0.49
SYNGAP1-227ENST00000638142 SLC25A28Q96A46 364 aa18.13■□□□□ 0.49
SYNGAP1-227ENST00000638142 SEH1LQ96EE3 360 aa18.13■□□□□ 0.49
SYNGAP1-227ENST00000638142 ADOQ96SZ5 270 aa18.13■□□□□ 0.49
SYNGAP1-227ENST00000638142 SLCO5A1Q9H2Y9 848 aa18.13■□□□□ 0.49
SYNGAP1-227ENST00000638142 MYOZ1Q9NP98 299 aaPredicted RBP18.13■□□□□ 0.49
SYNGAP1-227ENST00000638142 TMEM131Q92545 1883 aa18.13■□□□□ 0.49
SYNGAP1-227ENST00000638142 TMEM82A0PJX8 343 aa18.13■□□□□ 0.49
SYNGAP1-227ENST00000638142 C11orf98E9PRG8 122 aa18.13■□□□□ 0.49
SYNGAP1-227ENST00000638142 H0YIG0 161 aa18.13■□□□□ 0.49
SYNGAP1-227ENST00000638142 RAB3DO95716 219 aa18.13■□□□□ 0.49
SYNGAP1-227ENST00000638142 PNPP00491 289 aa18.13■□□□□ 0.49
SYNGAP1-227ENST00000638142 OR4E1P0C645 316 aa18.13■□□□□ 0.49
SYNGAP1-227ENST00000638142 KCTD18Q6PI47 426 aaPredicted RBP18.13■□□□□ 0.49
SYNGAP1-227ENST00000638142 TMEM205Q6UW68 189 aa18.13■□□□□ 0.49
SYNGAP1-227ENST00000638142 C12orf45Q8N5I9 185 aaPredicted RBP18.13■□□□□ 0.49
SYNGAP1-227ENST00000638142 PLPP7Q8NBV4 271 aa18.13■□□□□ 0.49
SYNGAP1-227ENST00000638142 GTF2A1LQ9UNN4 478 aa18.13■□□□□ 0.49
SYNGAP1-227ENST00000638142 PLCL2Q9UPR0 1127 aa18.13■□□□□ 0.49
SYNGAP1-227ENST00000638142 HCRTR2O43614 444 aa18.12■□□□□ 0.49
SYNGAP1-227ENST00000638142 OR6A2O95222 327 aa18.12■□□□□ 0.49
SYNGAP1-227ENST00000638142 HPP00738 406 aa18.12■□□□□ 0.49
SYNGAP1-227ENST00000638142 MT-ATP6P00846 226 aa18.12■□□□□ 0.49
SYNGAP1-227ENST00000638142 THEGLP0DJG4 465 aa18.12■□□□□ 0.49
SYNGAP1-227ENST00000638142 FSTP19883 344 aa18.12■□□□□ 0.49
SYNGAP1-227ENST00000638142 HTR2CP28335 458 aa18.12■□□□□ 0.49
SYNGAP1-227ENST00000638142 GABRA4P48169 554 aa18.12■□□□□ 0.49
SYNGAP1-227ENST00000638142 RPL27P61353 136 aaKnown RBP18.12■□□□□ 0.49
SYNGAP1-227ENST00000638142 SGCBQ16585 318 aa18.12■□□□□ 0.49
SYNGAP1-227ENST00000638142 C7orf61Q8IZ16 206 aa18.12■□□□□ 0.49
SYNGAP1-227ENST00000638142 ZNF519Q8TB69 540 aa18.12■□□□□ 0.49
SYNGAP1-227ENST00000638142 ASB5Q8WWX0 329 aa18.12■□□□□ 0.49
SYNGAP1-227ENST00000638142 PBX4Q9BYU1 374 aa18.12■□□□□ 0.49
SYNGAP1-227ENST00000638142 PNO1Q9NRX1 252 aaKnown RBP18.12■□□□□ 0.49
SYNGAP1-227ENST00000638142 GPR160Q9UJ42 338 aa18.12■□□□□ 0.49
SYNGAP1-227ENST00000638142 FBXL2Q9UKC9 423 aa18.12■□□□□ 0.49
SYNGAP1-227ENST00000638142 ICOSLGO75144 302 aa18.12■□□□□ 0.49
SYNGAP1-227ENST00000638142 SPARCP09486 303 aa18.12■□□□□ 0.49
SYNGAP1-227ENST00000638142 CD1CP29017 333 aa18.12■□□□□ 0.49
SYNGAP1-227ENST00000638142 AGTR1P30556 359 aa18.12■□□□□ 0.49
SYNGAP1-227ENST00000638142 CAPZBP47756 277 aa18.12■□□□□ 0.49
SYNGAP1-227ENST00000638142 CLVS2Q5SYC1 327 aa18.12■□□□□ 0.49
SYNGAP1-227ENST00000638142 NDUFAF7Q7L592 441 aa18.12■□□□□ 0.49
SYNGAP1-227ENST00000638142 ZNF107Q9UII5 783 aaPredicted RBP18.12■□□□□ 0.49
SYNGAP1-227ENST00000638142 CHURC1-FNTBB4DL54 471 aa18.11■□□□□ 0.49
SYNGAP1-227ENST00000638142 CD37P11049 281 aa18.11■□□□□ 0.49
SYNGAP1-227ENST00000638142 FNTBP49356 437 aa18.11■□□□□ 0.49
SYNGAP1-227ENST00000638142 BLKP51451 505 aa18.11■□□□□ 0.49
SYNGAP1-227ENST00000638142 RIDAP52758 137 aaKnown RBP18.11■□□□□ 0.49
SYNGAP1-227ENST00000638142 ACKR1Q16570 336 aa18.11■□□□□ 0.49
SYNGAP1-227ENST00000638142 ZSCAN2Q7Z7L9 614 aaPredicted RBP18.11■□□□□ 0.49
SYNGAP1-227ENST00000638142 FAM160A2Q8N612 972 aaPredicted RBP18.11■□□□□ 0.49
SYNGAP1-227ENST00000638142 C8orf44Q96CB5 159 aa18.11■□□□□ 0.49
SYNGAP1-227ENST00000638142 SLC41A2Q96JW4 573 aa18.11■□□□□ 0.49
SYNGAP1-227ENST00000638142 SLC25A32Q9H2D1 315 aa18.11■□□□□ 0.49
SYNGAP1-227ENST00000638142 GPR27Q9NS67 375 aa18.11■□□□□ 0.49
SYNGAP1-227ENST00000638142 MRPL22Q9NWU5 206 aaKnown RBP18.11■□□□□ 0.49
SYNGAP1-227ENST00000638142 VSX1Q9NZR4 365 aaPredicted RBP18.11■□□□□ 0.49
SYNGAP1-227ENST00000638142 A0A0A6YYH2 397 aa18.11■□□□□ 0.49
SYNGAP1-227ENST00000638142 IGLV1-36A0A0B4J1U3 117 aa18.11■□□□□ 0.49
SYNGAP1-227ENST00000638142 A0A1B0GW55 424 aa18.11■□□□□ 0.49
SYNGAP1-227ENST00000638142 A6NJ64 397 aa18.11■□□□□ 0.49
SYNGAP1-227ENST00000638142 NDUFA2O43678 99 aa18.11■□□□□ 0.49
SYNGAP1-227ENST00000638142 RAD1O60671 282 aa18.11■□□□□ 0.49
SYNGAP1-227ENST00000638142 SLC25A12O75746 678 aa18.11■□□□□ 0.49
SYNGAP1-227ENST00000638142 FCER2P06734 321 aa18.11■□□□□ 0.49
SYNGAP1-227ENST00000638142 DUX4L2P0CJ85 424 aa18.11■□□□□ 0.49
SYNGAP1-227ENST00000638142 DUX4L3P0CJ86 424 aa18.11■□□□□ 0.49
SYNGAP1-227ENST00000638142 DUX4L4P0CJ87 422 aa18.11■□□□□ 0.49
SYNGAP1-227ENST00000638142 DUX4L5P0CJ88 424 aa18.11■□□□□ 0.49
SYNGAP1-227ENST00000638142 DUX4L6P0CJ89 424 aa18.11■□□□□ 0.49
SYNGAP1-227ENST00000638142 DUX4L7P0CJ90 424 aa18.11■□□□□ 0.49
SYNGAP1-227ENST00000638142 IGFBP3P17936 291 aaPredicted RBP18.11■□□□□ 0.49
SYNGAP1-227ENST00000638142 LY6G6FQ5SQ64 297 aa18.11■□□□□ 0.49
SYNGAP1-227ENST00000638142 C1QL3Q5VWW1 255 aa18.11■□□□□ 0.49
SYNGAP1-227ENST00000638142 CATSPERDQ86XM0 798 aa18.11■□□□□ 0.49
SYNGAP1-227ENST00000638142 MRPS24Q96EL2 167 aaKnown RBP18.11■□□□□ 0.49
SYNGAP1-227ENST00000638142 ZNF587Q96SQ5 575 aaPredicted RBP18.11■□□□□ 0.49
SYNGAP1-227ENST00000638142 RTN4RQ9BZR6 473 aa18.11■□□□□ 0.49
SYNGAP1-227ENST00000638142 OR8D2Q9GZM6 311 aa18.11■□□□□ 0.49
SYNGAP1-227ENST00000638142 IFT46Q9NQC8 304 aa18.11■□□□□ 0.49
SYNGAP1-227ENST00000638142 PRMT8Q9NR22 394 aaPredicted RBP18.11■□□□□ 0.49
SYNGAP1-227ENST00000638142 LANCL2Q9NS86 450 aa18.11■□□□□ 0.49
SYNGAP1-227ENST00000638142 DUX4Q9UBX2 424 aa18.11■□□□□ 0.49
SYNGAP1-227ENST00000638142 HRH3Q9Y5N1 445 aa18.11■□□□□ 0.49
SYNGAP1-227ENST00000638142 PIAS3Q9Y6X2 628 aa18.11■□□□□ 0.49
SYNGAP1-227ENST00000638142 UNC80Q8N2C7 3258 aa18.1■□□□□ 0.49
SYNGAP1-227ENST00000638142 TRAV14DV4A0A0A6YYC5 116 aa18.1■□□□□ 0.49
SYNGAP1-227ENST00000638142 A0A1W2PPC1 479 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms