RNA–Protein interactions for RNA: ENST00000637053.1

VIM-210, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 508 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-210ENST00000637053 ENTPD6O75354 484 aa2.63□□□□□ -1.99
VIM-210ENST00000637053 BANF1O75531 89 aa2.63□□□□□ -1.99
VIM-210ENST00000637053 UGT2B17O75795 530 aa2.63□□□□□ -1.99
VIM-210ENST00000637053 DCTN3O75935 186 aa2.63□□□□□ -1.99
VIM-210ENST00000637053 S1PR2O95136 353 aa2.63□□□□□ -1.99
VIM-210ENST00000637053 GPR75O95800 540 aa2.63□□□□□ -1.99
VIM-210ENST00000637053 TTLL1O95922 423 aa2.63□□□□□ -1.99
VIM-210ENST00000637053 FAM107AO95990 144 aa2.63□□□□□ -1.99
VIM-210ENST00000637053 C1RP00736 705 aa2.63□□□□□ -1.99
VIM-210ENST00000637053 THY1P04216 161 aa2.63□□□□□ -1.99
VIM-210ENST00000637053 TYMSP04818 313 aa2.63□□□□□ -1.99
VIM-210ENST00000637053 IRF2P14316 349 aa2.63□□□□□ -1.99
VIM-210ENST00000637053 CREB1P16220 341 aa2.63□□□□□ -1.99
VIM-210ENST00000637053 MGMTP16455 207 aa2.63□□□□□ -1.99
VIM-210ENST00000637053 ZNF17P17021 662 aa2.63□□□□□ -1.99
VIM-210ENST00000637053 ZNF25P17030 456 aaPredicted RBP2.63□□□□□ -1.99
VIM-210ENST00000637053 SPI1P17947 270 aa2.63□□□□□ -1.99
VIM-210ENST00000637053 AOC1P19801 751 aa2.63□□□□□ -1.99
VIM-210ENST00000637053 ALOX5APP20292 161 aa2.63□□□□□ -1.99
VIM-210ENST00000637053 IMPDH1P20839 514 aa2.63□□□□□ -1.99
VIM-210ENST00000637053 F2RP25116 425 aa2.63□□□□□ -1.99
VIM-210ENST00000637053 MARK3P27448 753 aa2.63□□□□□ -1.99
VIM-210ENST00000637053 ITPKBP27987 946 aa2.63□□□□□ -1.99
VIM-210ENST00000637053 S100GP29377 79 aa2.63□□□□□ -1.99
VIM-210ENST00000637053 S100A7P31151 101 aa2.63□□□□□ -1.99
VIM-210ENST00000637053 FGF9P31371 208 aaPredicted RBP2.63□□□□□ -1.99
VIM-210ENST00000637053 CCKARP32238 428 aa2.63□□□□□ -1.99
VIM-210ENST00000637053 DCTP40126 519 aa2.63□□□□□ -1.99
VIM-210ENST00000637053 NKX2-1P43699 371 aaPredicted RBP2.63□□□□□ -1.99
VIM-210ENST00000637053 BDKRB1P46663 353 aa2.63□□□□□ -1.99
VIM-210ENST00000637053 GLIPR1P48060 266 aa2.63□□□□□ -1.99
VIM-210ENST00000637053 MEOX1P50221 254 aa2.63□□□□□ -1.99
VIM-210ENST00000637053 METAP2P50579 478 aaKnown RBP eCLIP2.63□□□□□ -1.997e-12■■□□□ 14.1
VIM-210ENST00000637053 EFNA3P52797 238 aa2.63□□□□□ -1.99
VIM-210ENST00000637053 STC1P52823 247 aa2.63□□□□□ -1.99
VIM-210ENST00000637053 CTSCP53634 463 aa2.63□□□□□ -1.99
VIM-210ENST00000637053 UGT2B15P54855 530 aa2.63□□□□□ -1.99
VIM-210ENST00000637053 CLDN6P56747 220 aa2.63□□□□□ -1.99
VIM-210ENST00000637053 CLDN20P56880 219 aa2.63□□□□□ -1.99
VIM-210ENST00000637053 DYNLL1P63167 89 aaKnown RBP2.63□□□□□ -1.99
VIM-210ENST00000637053 SLC35B1P78383 322 aa2.63□□□□□ -1.99
VIM-210ENST00000637053 BTN3A2P78410 334 aa2.63□□□□□ -1.99
VIM-210ENST00000637053 MRPS6P82932 125 aaKnown RBP2.63□□□□□ -1.99
VIM-210ENST00000637053 IFITM2Q01629 132 aa2.63□□□□□ -1.99
VIM-210ENST00000637053 ZNF415Q09FC8 603 aa2.63□□□□□ -1.99
VIM-210ENST00000637053 RIPPLY1Q0D2K3 151 aa2.63□□□□□ -1.99
VIM-210ENST00000637053 SLC10A7Q0GE19 358 aa2.63□□□□□ -1.99
VIM-210ENST00000637053 MYBPHQ13203 477 aa2.63□□□□□ -1.99
VIM-210ENST00000637053 ITPK1Q13572 414 aa2.63□□□□□ -1.99
VIM-210ENST00000637053 TSNQ15631 228 aaKnown RBP2.63□□□□□ -1.99
VIM-210ENST00000637053 UPP1Q16831 310 aa2.63□□□□□ -1.99
VIM-210ENST00000637053 ISXQ2M1V0 245 aa2.63□□□□□ -1.99
VIM-210ENST00000637053 ZBED5Q49AG3 693 aa2.63□□□□□ -1.99
VIM-210ENST00000637053 TP53I3Q53FA7 332 aa2.63□□□□□ -1.99
VIM-210ENST00000637053 EIPR1Q53HC9 387 aa2.63□□□□□ -1.99
VIM-210ENST00000637053 CARD16Q5EG05 197 aa2.63□□□□□ -1.99
VIM-210ENST00000637053 RNASE10Q5GAN6 216 aaKnown RBP2.63□□□□□ -1.99
VIM-210ENST00000637053 DMRTC1Q5HYR2 192 aa2.63□□□□□ -1.99
VIM-210ENST00000637053 OR10J3Q5JRS4 329 aa2.63□□□□□ -1.99
VIM-210ENST00000637053 FFAR4Q5NUL3 377 aa2.63□□□□□ -1.99
VIM-210ENST00000637053 C1QL3Q5VWW1 255 aa2.63□□□□□ -1.99
VIM-210ENST00000637053 KRTAP5-1Q6L8H4 278 aa2.63□□□□□ -1.99
VIM-210ENST00000637053 TMEM184AQ6ZMB5 413 aa2.63□□□□□ -1.99
VIM-210ENST00000637053 TCF24Q7RTU0 167 aa2.63□□□□□ -1.99
VIM-210ENST00000637053 YTHDF3Q7Z739 585 aaKnown RBP2.63□□□□□ -1.99
VIM-210ENST00000637053 CLNKQ7Z7G1 428 aa2.63□□□□□ -1.99
VIM-210ENST00000637053 ISCA2Q86U28 154 aa2.63□□□□□ -1.99
VIM-210ENST00000637053 APOBEC3FQ8IUX4 373 aaKnown RBP2.63□□□□□ -1.99
VIM-210ENST00000637053 ZNF547Q8IVP9 402 aa2.63□□□□□ -1.99
VIM-210ENST00000637053 SLC30A8Q8IWU4 369 aa2.63□□□□□ -1.99
VIM-210ENST00000637053 UEVLDQ8IX04 471 aa2.63□□□□□ -1.99
VIM-210ENST00000637053 CMTM1Q8IZ96 169 aa2.63□□□□□ -1.99
VIM-210ENST00000637053 BLIDQ8IZY5 108 aa2.63□□□□□ -1.99
VIM-210ENST00000637053 SLC34A3Q8N130 599 aa2.63□□□□□ -1.99
VIM-210ENST00000637053 CENPSQ8N2Z9 138 aa2.63□□□□□ -1.99
VIM-210ENST00000637053 SVOPLQ8N434 492 aa2.63□□□□□ -1.99
VIM-210ENST00000637053 C4orf32Q8N8J7 132 aa2.63□□□□□ -1.99
VIM-210ENST00000637053 PNPLA1Q8N8W4 532 aa2.63□□□□□ -1.99
VIM-210ENST00000637053 THAP8Q8NA92 274 aa2.63□□□□□ -1.99
VIM-210ENST00000637053 RNF149Q8NC42 400 aa2.63□□□□□ -1.99
VIM-210ENST00000637053 DMBX1Q8NFW5 382 aa2.63□□□□□ -1.99
VIM-210ENST00000637053 OR9Q1Q8NGQ5 310 aa2.63□□□□□ -1.99
VIM-210ENST00000637053 OR1K1Q8NGR3 316 aa2.63□□□□□ -1.99
VIM-210ENST00000637053 OR1B1Q8NGR6 318 aa2.63□□□□□ -1.99
VIM-210ENST00000637053 LNX1Q8TBB1 728 aaPredicted RBP2.63□□□□□ -1.99
VIM-210ENST00000637053 SFXN5Q8TD22 340 aa2.63□□□□□ -1.99
VIM-210ENST00000637053 TNFAIP8L1Q8WVP5 186 aa2.63□□□□□ -1.99
VIM-210ENST00000637053 TFAP2BQ92481 460 aa2.63□□□□□ -1.99
VIM-210ENST00000637053 ATOH1Q92858 354 aaPredicted RBP2.63□□□□□ -1.99
VIM-210ENST00000637053 TBRG4Q969Z0 631 aaKnown RBP eCLIP2.63□□□□□ -1.99
VIM-210ENST00000637053 FKBP10Q96AY3 582 aa2.63□□□□□ -1.99
VIM-210ENST00000637053 CCDC126Q96EE4 140 aa2.63□□□□□ -1.99
VIM-210ENST00000637053 MED8Q96G25 268 aa2.63□□□□□ -1.99
VIM-210ENST00000637053 UHRF2Q96PU4 802 aa2.63□□□□□ -1.99
VIM-210ENST00000637053 KCNA7Q96RP8 456 aa2.63□□□□□ -1.99
VIM-210ENST00000637053 CNN2Q99439 309 aaKnown RBP2.63□□□□□ -1.99
VIM-210ENST00000637053 GPR22Q99680 433 aa2.63□□□□□ -1.99
VIM-210ENST00000637053 ARHGDIGQ99819 225 aa2.63□□□□□ -1.99
VIM-210ENST00000637053 VPS25Q9BRG1 176 aa2.63□□□□□ -1.99
VIM-210ENST00000637053 TMEM208Q9BTX3 173 aa2.63□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms