RNA–Protein interactions for RNA: ENST00000636194.1

SCN1A-212, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 8,508 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-212ENST00000636194 SPEM2Q0P670 501 aa5.57□□□□□ -1.52
SCN1A-212ENST00000636194 HAGHQ16775 308 aa5.57□□□□□ -1.52
SCN1A-212ENST00000636194 OR2A2Q6IF42 318 aa5.57□□□□□ -1.52
SCN1A-212ENST00000636194 PRR27Q6MZM9 219 aa5.57□□□□□ -1.52
SCN1A-212ENST00000636194 FBXL14Q8N1E6 418 aa5.57□□□□□ -1.52
SCN1A-212ENST00000636194 SCML4Q8N228 414 aa5.57□□□□□ -1.52
SCN1A-212ENST00000636194 ARHGEF39Q8N4T4 335 aa5.57□□□□□ -1.52
SCN1A-212ENST00000636194 PINX1Q96BK5 328 aaKnown RBP5.57□□□□□ -1.52
SCN1A-212ENST00000636194 SLC25A21Q9BQT8 299 aaPredicted RBP5.57□□□□□ -1.52
SCN1A-212ENST00000636194 THAP7Q9BT49 309 aaPredicted RBP5.57□□□□□ -1.52
SCN1A-212ENST00000636194 SLC17A9Q9BYT1 436 aa5.57□□□□□ -1.52
SCN1A-212ENST00000636194 SELENOIQ9C0D9 397 aa5.57□□□□□ -1.52
SCN1A-212ENST00000636194 GDE1Q9NZC3 331 aa5.57□□□□□ -1.52
SCN1A-212ENST00000636194 INSL5Q9Y5Q6 135 aa5.57□□□□□ -1.52
SCN1A-212ENST00000636194 COL5A2P05997 1499 aaPredicted RBP5.57□□□□□ -1.52
SCN1A-212ENST00000636194 IFT172Q9UG01 1749 aa5.57□□□□□ -1.52
SCN1A-212ENST00000636194 UBR2Q8IWV8 1755 aa5.57□□□□□ -1.52
SCN1A-212ENST00000636194 ZNF814B7Z6K7 855 aa5.57□□□□□ -1.52
SCN1A-212ENST00000636194 EEDO75530 441 aaKnown RBP5.57□□□□□ -1.52
SCN1A-212ENST00000636194 H2AFB1P0C5Y9 115 aa5.57□□□□□ -1.52
SCN1A-212ENST00000636194 PGGHGQ32M88 737 aa5.57□□□□□ -1.52
SCN1A-212ENST00000636194 H3F3CQ6NXT2 135 aa5.57□□□□□ -1.52
SCN1A-212ENST00000636194 ZFP62Q8NB50 900 aaPredicted RBP5.57□□□□□ -1.52
SCN1A-212ENST00000636194 DTWD2Q8NBA8 298 aa5.57□□□□□ -1.52
SCN1A-212ENST00000636194 ZNF845Q96IR2 970 aaPredicted RBP5.57□□□□□ -1.52
SCN1A-212ENST00000636194 MRIQ9BWK5 157 aa5.57□□□□□ -1.52
SCN1A-212ENST00000636194 CLEC1BQ9P126 229 aa5.57□□□□□ -1.52
SCN1A-212ENST00000636194 TECPR2O15040 1411 aa5.57□□□□□ -1.52
SCN1A-212ENST00000636194 TMEM150BA6NC51 233 aa5.57□□□□□ -1.52
SCN1A-212ENST00000636194 MYADML2A6NDP7 307 aa5.57□□□□□ -1.52
SCN1A-212ENST00000636194 CTDNEP1O95476 244 aa5.57□□□□□ -1.52
SCN1A-212ENST00000636194 MPGP29372 298 aa5.57□□□□□ -1.52
SCN1A-212ENST00000636194 RPS24P62847 133 aaKnown RBP5.57□□□□□ -1.52
SCN1A-212ENST00000636194 C17orf67Q0P5P2 114 aa5.57□□□□□ -1.52
SCN1A-212ENST00000636194 RAB40BQ12829 278 aa5.57□□□□□ -1.52
SCN1A-212ENST00000636194 OR2F1Q13607 317 aa5.57□□□□□ -1.52
SCN1A-212ENST00000636194 CNIH2Q6PI25 160 aa5.57□□□□□ -1.52
SCN1A-212ENST00000636194 STAC2Q6ZMT1 411 aa5.57□□□□□ -1.52
SCN1A-212ENST00000636194 OR6M1Q8NGM8 313 aa5.57□□□□□ -1.52
SCN1A-212ENST00000636194 WDR83Q9BRX9 315 aaKnown RBP5.57□□□□□ -1.52
SCN1A-212ENST00000636194 RHCGQ9UBD6 479 aa5.57□□□□□ -1.52
SCN1A-212ENST00000636194 LOC730098B7Z3J9 87 aa5.57□□□□□ -1.52
SCN1A-212ENST00000636194 J3KR12 359 aa5.57□□□□□ -1.52
SCN1A-212ENST00000636194 XRCC2O43543 280 aa5.57□□□□□ -1.52
SCN1A-212ENST00000636194 F3P13726 295 aa5.57□□□□□ -1.52
SCN1A-212ENST00000636194 EGR1P18146 543 aa5.57□□□□□ -1.52
SCN1A-212ENST00000636194 RFX2P48378 723 aa5.57□□□□□ -1.52
SCN1A-212ENST00000636194 AQP6Q13520 282 aa5.57□□□□□ -1.52
SCN1A-212ENST00000636194 HLXQ14774 488 aaPredicted RBP5.57□□□□□ -1.52
SCN1A-212ENST00000636194 CST6Q15828 149 aa5.57□□□□□ -1.52
SCN1A-212ENST00000636194 DUSP6Q16828 381 aa5.57□□□□□ -1.52
SCN1A-212ENST00000636194 Q56UQ5 140 aa5.57□□□□□ -1.52
SCN1A-212ENST00000636194 COL13A1Q5TAT6 717 aaPredicted RBP5.57□□□□□ -1.52
SCN1A-212ENST00000636194 ANKRD13BQ86YJ7 626 aa5.57□□□□□ -1.52
SCN1A-212ENST00000636194 SLC22A24Q8N4F4 322 aa5.57□□□□□ -1.52
SCN1A-212ENST00000636194 ARFGAP1Q8N6T3 406 aa5.57□□□□□ -1.52
SCN1A-212ENST00000636194 OR6K3Q8NGY3 331 aa5.57□□□□□ -1.52
SCN1A-212ENST00000636194 C14orf79Q96F83 325 aa5.57□□□□□ -1.52
SCN1A-212ENST00000636194 TMEM56Q96MV1 263 aa5.57□□□□□ -1.52
SCN1A-212ENST00000636194 OR8B4Q96RC9 309 aa5.57□□□□□ -1.52
SCN1A-212ENST00000636194 WDR18Q9BV38 432 aa5.57□□□□□ -1.52
SCN1A-212ENST00000636194 GATA5Q9BWX5 397 aaPredicted RBP5.57□□□□□ -1.52
SCN1A-212ENST00000636194 PDZD7Q9H5P4 517 aa5.57□□□□□ -1.52
SCN1A-212ENST00000636194 SEMA4GQ9NTN9 838 aa5.57□□□□□ -1.52
SCN1A-212ENST00000636194 SLC5A6Q9Y289 635 aa5.57□□□□□ -1.52
SCN1A-212ENST00000636194 NUP98P52948 1817 aa5.56□□□□□ -1.52
SCN1A-212ENST00000636194 NID2Q14112 1375 aa5.56□□□□□ -1.52
SCN1A-212ENST00000636194 SORL1Q92673 2214 aa5.56□□□□□ -1.52
SCN1A-212ENST00000636194 TRGV10A0A0A0MS01 117 aa5.56□□□□□ -1.52
SCN1A-212ENST00000636194 LEFTY1O75610 366 aa5.56□□□□□ -1.52
SCN1A-212ENST00000636194 CNMDO75829 334 aa5.56□□□□□ -1.52
SCN1A-212ENST00000636194 CRYABP02511 175 aaKnown RBP5.56□□□□□ -1.52
SCN1A-212ENST00000636194 POU3F1Q03052 451 aaPredicted RBP5.56□□□□□ -1.52
SCN1A-212ENST00000636194 CYP1B1Q16678 543 aa5.56□□□□□ -1.52
SCN1A-212ENST00000636194 NADSYN1Q6IA69 706 aa5.56□□□□□ -1.52
SCN1A-212ENST00000636194 CCBE1Q6UXH8 406 aaPredicted RBP5.56□□□□□ -1.52
SCN1A-212ENST00000636194 TAC4Q86UU9 113 aa5.56□□□□□ -1.52
SCN1A-212ENST00000636194 OR2D3Q8NGH3 330 aa5.56□□□□□ -1.52
SCN1A-212ENST00000636194 BIRC7Q96CA5 298 aa5.56□□□□□ -1.52
SCN1A-212ENST00000636194 TAAR6Q96RI8 345 aa5.56□□□□□ -1.52
SCN1A-212ENST00000636194 THSD1Q9NS62 852 aa5.56□□□□□ -1.52
SCN1A-212ENST00000636194 RNF11Q9Y3C5 154 aa5.56□□□□□ -1.52
SCN1A-212ENST00000636194 ALKQ9UM73 1620 aa5.56□□□□□ -1.52
SCN1A-212ENST00000636194 TMEM200CA6NKL6 621 aa5.56□□□□□ -1.52
SCN1A-212ENST00000636194 SCAMP2O15127 329 aaKnown RBP5.56□□□□□ -1.52
SCN1A-212ENST00000636194 PER1O15534 1290 aaPredicted RBP5.56□□□□□ -1.52
SCN1A-212ENST00000636194 MPDU1O75352 247 aa5.56□□□□□ -1.52
SCN1A-212ENST00000636194 HPP00738 406 aa5.56□□□□□ -1.52
SCN1A-212ENST00000636194 QDPRP09417 244 aa5.56□□□□□ -1.52
SCN1A-212ENST00000636194 ADRA2CP18825 462 aa5.56□□□□□ -1.52
SCN1A-212ENST00000636194 TNFRSF1AP19438 455 aa5.56□□□□□ -1.52
SCN1A-212ENST00000636194 COX5AP20674 150 aa5.56□□□□□ -1.52
SCN1A-212ENST00000636194 CEACAM3P40198 252 aa5.56□□□□□ -1.52
SCN1A-212ENST00000636194 ERVPABLB-1P60509 514 aa5.56□□□□□ -1.52
SCN1A-212ENST00000636194 KIAA0141Q14154 515 aaPredicted RBP5.56□□□□□ -1.52
SCN1A-212ENST00000636194 OR52L2PQ8NGH6 319 aa5.56□□□□□ -1.52
SCN1A-212ENST00000636194 OR5D13Q8NGL4 314 aa5.56□□□□□ -1.52
SCN1A-212ENST00000636194 OR13C4Q8NGS5 318 aa5.56□□□□□ -1.52
SCN1A-212ENST00000636194 OR2A14Q96R47 310 aa5.56□□□□□ -1.52
SCN1A-212ENST00000636194 ALOXE3Q9BYJ1 711 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 110.8 ms