RNA–Protein interactions for RNA: ENST00000625299.1

PNKP-218, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 428 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-218ENST00000625299 VSNL1P62760 191 aa12.35□□□□□ -0.43
PNKP-218ENST00000625299 ERVK-25P63136 954 aa12.35□□□□□ -0.43
PNKP-218ENST00000625299 MPP2Q14168 576 aa12.35□□□□□ -0.43
PNKP-218ENST00000625299 ZMYND11Q15326 602 aa12.35□□□□□ -0.43
PNKP-218ENST00000625299 OCLNQ16625 522 aa12.35□□□□□ -0.43
PNKP-218ENST00000625299 NRN1LQ496H8 165 aa12.35□□□□□ -0.43
PNKP-218ENST00000625299 TMEM155Q4W5P6 130 aa12.35□□□□□ -0.43
PNKP-218ENST00000625299 ZNF613Q6PF04 617 aa12.35□□□□□ -0.43
PNKP-218ENST00000625299 TTC33Q6PID6 262 aaPredicted RBP12.35□□□□□ -0.43
PNKP-218ENST00000625299 C1QL4Q86Z23 238 aa12.35□□□□□ -0.43
PNKP-218ENST00000625299 ANKRD42Q8N9B4 389 aa12.35□□□□□ -0.43
PNKP-218ENST00000625299 BHLHE22Q8NFJ8 381 aaPredicted RBP12.35□□□□□ -0.43
PNKP-218ENST00000625299 UBE2FQ969M7 185 aa12.35□□□□□ -0.43
PNKP-218ENST00000625299 ZDHHC16Q969W1 377 aa12.35□□□□□ -0.43
PNKP-218ENST00000625299 SLC19A3Q9BZV2 496 aa12.35□□□□□ -0.43
PNKP-218ENST00000625299 MMP27Q9H306 513 aa12.35□□□□□ -0.43
PNKP-218ENST00000625299 NANOGQ9H9S0 305 aa12.35□□□□□ -0.43
PNKP-218ENST00000625299 BEX1Q9HBH7 125 aa12.35□□□□□ -0.43
PNKP-218ENST00000625299 SLC25A37Q9NYZ2 338 aa12.35□□□□□ -0.43
PNKP-218ENST00000625299 CGGBP1Q9UFW8 167 aaPredicted RBP12.35□□□□□ -0.43
PNKP-218ENST00000625299 MMP24Q9Y5R2 645 aa12.35□□□□□ -0.43
PNKP-218ENST00000625299 A0A1W2PRG6 482 aa12.34□□□□□ -0.43
PNKP-218ENST00000625299 A8MXK9 166 aa12.34□□□□□ -0.43
PNKP-218ENST00000625299 BLOC1S5-TXNDC5H3BN57 136 aa12.34□□□□□ -0.43
PNKP-218ENST00000625299 UBDO15205 165 aa12.34□□□□□ -0.43
PNKP-218ENST00000625299 SERPINB7O75635 380 aa12.34□□□□□ -0.43
PNKP-218ENST00000625299 F13BP05160 661 aa12.34□□□□□ -0.43
PNKP-218ENST00000625299 ADH4P08319 380 aa12.34□□□□□ -0.43
PNKP-218ENST00000625299 HOXB9P17482 250 aaPredicted RBP12.34□□□□□ -0.43
PNKP-218ENST00000625299 TNFSF4P23510 183 aa12.34□□□□□ -0.43
PNKP-218ENST00000625299 PAX8Q06710 450 aa12.34□□□□□ -0.43
PNKP-218ENST00000625299 TAF11Q15544 211 aa12.34□□□□□ -0.43
PNKP-218ENST00000625299 SGCAQ16586 387 aa12.34□□□□□ -0.43
PNKP-218ENST00000625299 MTX3Q5HYI7 312 aa12.34□□□□□ -0.43
PNKP-218ENST00000625299 BTNL3Q6UXE8 466 aa12.34□□□□□ -0.43
PNKP-218ENST00000625299 LRRC28Q86X40 367 aaPredicted RBP12.34□□□□□ -0.43
PNKP-218ENST00000625299 MSRB3Q8IXL7 192 aa12.34□□□□□ -0.43
PNKP-218ENST00000625299 OR2Z1Q8NG97 314 aa12.34□□□□□ -0.43
PNKP-218ENST00000625299 OR4F5Q8NH21 305 aa12.34□□□□□ -0.43
PNKP-218ENST00000625299 VANGL1Q8TAA9 524 aaPredicted RBP12.34□□□□□ -0.43
PNKP-218ENST00000625299 NSMAFQ92636 917 aa12.34□□□□□ -0.43
PNKP-218ENST00000625299 OR52B2Q96RD2 323 aa12.34□□□□□ -0.43
PNKP-218ENST00000625299 SIAEQ9HAT2 523 aa12.34□□□□□ -0.43
PNKP-218ENST00000625299 SSU72Q9NP77 194 aaKnown RBP12.34□□□□□ -0.43
PNKP-218ENST00000625299 SLCO1B3Q9NPD5 702 aa12.34□□□□□ -0.43
PNKP-218ENST00000625299 ZNF229Q9UJW7 825 aa12.34□□□□□ -0.43
PNKP-218ENST00000625299 SLC7A7Q9UM01 511 aa12.34□□□□□ -0.43
PNKP-218ENST00000625299 A0A1B0GUS0 222 aa12.33□□□□□ -0.44
PNKP-218ENST00000625299 F5H0A9 414 aaPredicted RBP12.33□□□□□ -0.44
PNKP-218ENST00000625299 MGRN1O60291 552 aa12.33□□□□□ -0.44
PNKP-218ENST00000625299 FMO6PO60774 539 aa12.33□□□□□ -0.44
PNKP-218ENST00000625299 TRMUO75648 421 aaKnown RBP12.33□□□□□ -0.44
PNKP-218ENST00000625299 NGFP01138 241 aa12.33□□□□□ -0.44
PNKP-218ENST00000625299 OPN1SWP03999 348 aa12.33□□□□□ -0.44
PNKP-218ENST00000625299 ARHGDIAP52565 204 aa12.33□□□□□ -0.44
PNKP-218ENST00000625299 PSG4Q00888 419 aa12.33□□□□□ -0.44
PNKP-218ENST00000625299 FMODQ06828 376 aa12.33□□□□□ -0.44
PNKP-218ENST00000625299 HIST3H3Q16695 136 aa12.33□□□□□ -0.44
PNKP-218ENST00000625299 DEFB112Q30KQ8 113 aa12.33□□□□□ -0.44
PNKP-218ENST00000625299 ENTPD8Q5MY95 495 aa12.33□□□□□ -0.44
PNKP-218ENST00000625299 OLFML2AQ68BL7 652 aa12.33□□□□□ -0.44
PNKP-218ENST00000625299 FIP1L1Q6UN15 594 aaKnown RBP12.33□□□□□ -0.44
PNKP-218ENST00000625299 LINC00114Q6XXX2 140 aa12.33□□□□□ -0.44
PNKP-218ENST00000625299 BRD3OSQ6XYD6 125 aa12.33□□□□□ -0.44
PNKP-218ENST00000625299 C9orf139Q6ZV77 190 aa12.33□□□□□ -0.44
PNKP-218ENST00000625299 ZNF283Q8N7M2 679 aa12.33□□□□□ -0.44
PNKP-218ENST00000625299 MAELQ96JY0 434 aaKnown RBP12.33□□□□□ -0.44
PNKP-218ENST00000625299 MARCH7Q9H992 704 aa12.33□□□□□ -0.44
PNKP-218ENST00000625299 THAP1Q9NVV9 213 aa12.33□□□□□ -0.44
PNKP-218ENST00000625299 SLAMF8Q9P0V8 285 aa12.33□□□□□ -0.44
PNKP-218ENST00000625299 PPP1R3CQ9UQK1 317 aa12.33□□□□□ -0.44
PNKP-218ENST00000625299 ANGPT4Q9Y264 503 aa12.33□□□□□ -0.44
PNKP-218ENST00000625299 CEACAM18A8MTB9 384 aa12.32□□□□□ -0.44
PNKP-218ENST00000625299 TIMM23O14925 209 aa12.32□□□□□ -0.44
PNKP-218ENST00000625299 ZNF205O95201 554 aa12.32□□□□□ -0.44
PNKP-218ENST00000625299 PLATP00750 562 aa12.32□□□□□ -0.44
PNKP-218ENST00000625299 THY1P04216 161 aa12.32□□□□□ -0.44
PNKP-218ENST00000625299 ASAH2BP0C7U1 165 aa12.32□□□□□ -0.44
PNKP-218ENST00000625299 RPS2P15880 293 aaKnown RBP12.32□□□□□ -0.44
PNKP-218ENST00000625299 ACADSP16219 412 aa12.32□□□□□ -0.44
PNKP-218ENST00000625299 TNFRSF1AP19438 455 aa12.32□□□□□ -0.44
PNKP-218ENST00000625299 MDH2P40926 338 aaKnown RBP12.32□□□□□ -0.44
PNKP-218ENST00000625299 DAP3P51398 398 aaKnown RBP12.32□□□□□ -0.44
PNKP-218ENST00000625299 MRPS34P82930 218 aaKnown RBP12.32□□□□□ -0.44
PNKP-218ENST00000625299 RPL18Q07020 188 aaKnown RBP12.32□□□□□ -0.44
PNKP-218ENST00000625299 CD47Q08722 323 aa12.32□□□□□ -0.44
PNKP-218ENST00000625299 NPTX1Q15818 432 aa12.32□□□□□ -0.44
PNKP-218ENST00000625299 ZNF362Q5T0B9 420 aaPredicted RBP12.32□□□□□ -0.44
PNKP-218ENST00000625299 C10orf128Q5T292 105 aa12.32□□□□□ -0.44
PNKP-218ENST00000625299 HIST2H2BDQ6DRA6 164 aa12.32□□□□□ -0.44
PNKP-218ENST00000625299 LRRN1Q6UXK5 716 aa12.32□□□□□ -0.44
PNKP-218ENST00000625299 MAVSQ7Z434 540 aa12.32□□□□□ -0.44
PNKP-218ENST00000625299 RBM45Q8IUH3 476 aaKnown RBP12.32□□□□□ -0.44
PNKP-218ENST00000625299 OR6T1Q8NGN1 323 aa12.32□□□□□ -0.44
PNKP-218ENST00000625299 OR10S1Q8NGN2 331 aa12.32□□□□□ -0.44
PNKP-218ENST00000625299 ADAMTS16Q8TE57 1224 aa12.32□□□□□ -0.44
PNKP-218ENST00000625299 ITLN1Q8WWA0 313 aa12.32□□□□□ -0.44
PNKP-218ENST00000625299 ASB10Q8WXI3 467 aa12.32□□□□□ -0.44
PNKP-218ENST00000625299 NABP1Q96AH0 204 aa12.32□□□□□ -0.44
PNKP-218ENST00000625299 UPRTQ96BW1 309 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms