RNA–Protein interactions for RNA: ENST00000623461.3

VCL-206, Transcript of vinculin, humanhuman

TSL 1 (best)

Gene VCL, Length 7,995 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-206ENST00000623461 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.19□□□□□ -1.1
VCL-206ENST00000623461 ADAMTS7Q9UKP4 1686 aa8.19□□□□□ -1.1
VCL-206ENST00000623461 ZNF727A8MUV8 499 aa8.19□□□□□ -1.1
VCL-206ENST00000623461 GJB3O75712 270 aa8.19□□□□□ -1.1
VCL-206ENST00000623461 F13BP05160 661 aa8.19□□□□□ -1.1
VCL-206ENST00000623461 NKX2-1P43699 371 aaPredicted RBP8.19□□□□□ -1.1
VCL-206ENST00000623461 RPL34P49207 117 aaKnown RBP8.19□□□□□ -1.1
VCL-206ENST00000623461 FABP6P51161 128 aa8.19□□□□□ -1.1
VCL-206ENST00000623461 EGR3Q06889 387 aa8.19□□□□□ -1.1
VCL-206ENST00000623461 BAXQ07812 192 aa8.19□□□□□ -1.1
VCL-206ENST00000623461 OR7A5Q15622 319 aa8.19□□□□□ -1.1
VCL-206ENST00000623461 SSX1Q16384 188 aa8.19□□□□□ -1.1
VCL-206ENST00000623461 EMC4Q5J8M3 183 aa8.19□□□□□ -1.1
VCL-206ENST00000623461 TMEM151BQ8IW70 566 aa8.19□□□□□ -1.1
VCL-206ENST00000623461 PLPP7Q8NBV4 271 aa8.19□□□□□ -1.1
VCL-206ENST00000623461 SEH1LQ96EE3 360 aa8.19□□□□□ -1.1
VCL-206ENST00000623461 SUCNR1Q9BXA5 334 aa8.19□□□□□ -1.1
VCL-206ENST00000623461 ARV1Q9H2C2 271 aa8.19□□□□□ -1.1
VCL-206ENST00000623461 NKX2-4Q9H2Z4 354 aa8.19□□□□□ -1.1
VCL-206ENST00000623461 CRLF2Q9HC73 371 aa8.19□□□□□ -1.1
VCL-206ENST00000623461 ELF5Q9UKW6 265 aaPredicted RBP8.19□□□□□ -1.1
VCL-206ENST00000623461 PYCARD-AS1I3L0S3 204 aa8.19□□□□□ -1.1
VCL-206ENST00000623461 HMGN4O00479 90 aa8.19□□□□□ -1.1
VCL-206ENST00000623461 SMAD6O43541 496 aaKnown RBP8.19□□□□□ -1.1
VCL-206ENST00000623461 GLAP06280 429 aa8.19□□□□□ -1.1
VCL-206ENST00000623461 IGFBP1P08833 259 aaPredicted RBP8.19□□□□□ -1.1
VCL-206ENST00000623461 FCGR2AP12318 317 aa8.19□□□□□ -1.1
VCL-206ENST00000623461 HOXD9P28356 352 aaPredicted RBP8.19□□□□□ -1.1
VCL-206ENST00000623461 CCL14Q16627 93 aa8.19□□□□□ -1.1
VCL-206ENST00000623461 LIPIQ6XZB0 460 aa8.19□□□□□ -1.1
VCL-206ENST00000623461 RNF165Q6ZSG1 346 aa8.19□□□□□ -1.1
VCL-206ENST00000623461 RBM45Q8IUH3 476 aaKnown RBP8.19□□□□□ -1.1
VCL-206ENST00000623461 MKXQ8IYA7 352 aa8.19□□□□□ -1.1
VCL-206ENST00000623461 METTL27Q8N6F8 245 aaPredicted RBP8.19□□□□□ -1.1
VCL-206ENST00000623461 BCL2L10Q9HD36 194 aa8.19□□□□□ -1.1
VCL-206ENST00000623461 TAAR2Q9P1P5 351 aa8.19□□□□□ -1.1
VCL-206ENST00000623461 SCN7AQ01118 1682 aa8.19□□□□□ -1.1
VCL-206ENST00000623461 FAM221BA6H8Z2 402 aa8.18□□□□□ -1.1
VCL-206ENST00000623461 YY2O15391 372 aa8.18□□□□□ -1.1
VCL-206ENST00000623461 JMJD7P0C870 316 aa8.18□□□□□ -1.1
VCL-206ENST00000623461 IRF2P14316 349 aa8.18□□□□□ -1.1
VCL-206ENST00000623461 DCTDP32321 178 aa8.18□□□□□ -1.1
VCL-206ENST00000623461 CATR1Q13166 79 aa8.18□□□□□ -1.1
VCL-206ENST00000623461 HAGHQ16775 308 aa8.18□□□□□ -1.1
VCL-206ENST00000623461 ACOT6Q3I5F7 207 aaPredicted RBP8.18□□□□□ -1.1
VCL-206ENST00000623461 YOD1Q5VVQ6 348 aaPredicted RBP8.18□□□□□ -1.1
VCL-206ENST00000623461 RNLSQ5VYX0 342 aa8.18□□□□□ -1.1
VCL-206ENST00000623461 GGNBP1Q5YKI7 109 aa8.18□□□□□ -1.1
VCL-206ENST00000623461 ZDHHC22Q8N966 263 aa8.18□□□□□ -1.1
VCL-206ENST00000623461 OR52B4Q8NGK2 314 aa8.18□□□□□ -1.1
VCL-206ENST00000623461 LILRB1Q8NHL6 650 aaPredicted RBP8.18□□□□□ -1.1
VCL-206ENST00000623461 SLC6A18Q96N87 628 aa8.18□□□□□ -1.1
VCL-206ENST00000623461 SEC11CQ9BY50 192 aa8.18□□□□□ -1.1
VCL-206ENST00000623461 CTDSPLO15194 276 aa8.18□□□□□ -1.1
VCL-206ENST00000623461 CD3DP04234 171 aa8.18□□□□□ -1.1
VCL-206ENST00000623461 FABP4P15090 132 aa8.18□□□□□ -1.1
VCL-206ENST00000623461 EPHA4P54764 986 aa8.18□□□□□ -1.1
VCL-206ENST00000623461 SCAND1P57086 179 aa8.18□□□□□ -1.1
VCL-206ENST00000623461 NKG7Q16617 165 aa8.18□□□□□ -1.1
VCL-206ENST00000623461 MEP1BQ16820 701 aa8.18□□□□□ -1.1
VCL-206ENST00000623461 FCRL6Q6DN72 434 aa8.18□□□□□ -1.1
VCL-206ENST00000623461 OR52W1Q6IF63 320 aa8.18□□□□□ -1.1
VCL-206ENST00000623461 STACQ99469 402 aa8.18□□□□□ -1.1
VCL-206ENST00000623461 PTDSS2Q9BVG9 487 aa8.18□□□□□ -1.1
VCL-206ENST00000623461 SLC17A5Q9NRA2 495 aa8.18□□□□□ -1.1
VCL-206ENST00000623461 VSX1Q9NZR4 365 aaPredicted RBP8.18□□□□□ -1.1
VCL-206ENST00000623461 CXXC1Q9P0U4 656 aaPredicted RBP8.18□□□□□ -1.1
VCL-206ENST00000623461 SERINC4A6NH21 518 aa8.18□□□□□ -1.1
VCL-206ENST00000623461 INHBBP09529 407 aa8.18□□□□□ -1.1
VCL-206ENST00000623461 ZNF250P15622 560 aa8.18□□□□□ -1.1
VCL-206ENST00000623461 DIO1P49895 249 aa8.18□□□□□ -1.1
VCL-206ENST00000623461 SLC17A1Q14916 467 aa8.18□□□□□ -1.1
VCL-206ENST00000623461 TESK1Q15569 626 aa8.18□□□□□ -1.1
VCL-206ENST00000623461 C2orf27AQ580R0 203 aa8.18□□□□□ -1.1
VCL-206ENST00000623461 PET117Q6UWS5 81 aa8.18□□□□□ -1.1
VCL-206ENST00000623461 GPR119Q8TDV5 335 aa8.18□□□□□ -1.1
VCL-206ENST00000623461 CXorf58Q96LI9 332 aa8.18□□□□□ -1.1
VCL-206ENST00000623461 DEFB126Q9BYW3 111 aa8.18□□□□□ -1.1
VCL-206ENST00000623461 EMC9Q9Y3B6 208 aa8.18□□□□□ -1.1
VCL-206ENST00000623461 TRAV36DV7A0A075B6V5 113 aa8.18□□□□□ -1.1
VCL-206ENST00000623461 A0A0J9YY10 115 aa8.18□□□□□ -1.1
VCL-206ENST00000623461 TMEM218A2RU14 115 aa8.18□□□□□ -1.1
VCL-206ENST00000623461 ASPDHA6ND91 283 aa8.18□□□□□ -1.1
VCL-206ENST00000623461 HOXB2P14652 356 aa8.18□□□□□ -1.1
VCL-206ENST00000623461 TIMP2P16035 220 aa8.18□□□□□ -1.1
VCL-206ENST00000623461 BMPR1AP36894 532 aa8.18□□□□□ -1.1
VCL-206ENST00000623461 UBE2MP61081 183 aaKnown RBP8.18□□□□□ -1.1
VCL-206ENST00000623461 EXOSC7Q15024 291 aaKnown RBP8.18□□□□□ -1.1
VCL-206ENST00000623461 GUK1Q16774 197 aa8.18□□□□□ -1.1
VCL-206ENST00000623461 SLC36A2Q495M3 483 aa8.18□□□□□ -1.1
VCL-206ENST00000623461 SHEQ5VZ18 495 aa8.18□□□□□ -1.1
VCL-206ENST00000623461 TCTN3Q6NUS6 607 aa8.18□□□□□ -1.1
VCL-206ENST00000623461 ZNF852Q6ZMS4 543 aa8.18□□□□□ -1.1
VCL-206ENST00000623461 STAC2Q6ZMT1 411 aa8.18□□□□□ -1.1
VCL-206ENST00000623461 TMPPEQ6ZT21 453 aa8.18□□□□□ -1.1
VCL-206ENST00000623461 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.18□□□□□ -1.1
VCL-206ENST00000623461 OR52E1Q8NGJ3 308 aa8.18□□□□□ -1.1
VCL-206ENST00000623461 USB1Q9BQ65 265 aaKnown RBP8.18□□□□□ -1.1
VCL-206ENST00000623461 FOCADQ5VW36 1801 aa8.18□□□□□ -1.1
VCL-206ENST00000623461 NHSQ6T4R5 1651 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms