RNA–Protein interactions for RNA: ENST00000621676.4

VPS11-208, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS11, Length 3,313 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-208ENST00000621676 ZNF700Q9H0M5 742 aa9.38□□□□□ -0.91
VPS11-208ENST00000621676 MMP28Q9H239 520 aa9.38□□□□□ -0.91
VPS11-208ENST00000621676 FRRS1LQ9P0K9 344 aa9.38□□□□□ -0.91
VPS11-208ENST00000621676 WNK2Q9Y3S1 2297 aa9.38□□□□□ -0.91
VPS11-208ENST00000621676 PTPN13Q12923 2485 aa9.38□□□□□ -0.91
VPS11-208ENST00000621676 CASRP41180 1078 aa9.38□□□□□ -0.91
VPS11-208ENST00000621676 TMEM201Q5SNT2 666 aa9.38□□□□□ -0.91
VPS11-208ENST00000621676 RNF170Q96K19 258 aa9.38□□□□□ -0.91
VPS11-208ENST00000621676 TXNIPQ9H3M7 391 aa9.38□□□□□ -0.91
VPS11-208ENST00000621676 PPP1R3EQ9H7J1 279 aa9.38□□□□□ -0.91
VPS11-208ENST00000621676 PLEK2Q9NYT0 353 aa9.38□□□□□ -0.91
VPS11-208ENST00000621676 CD3GP09693 182 aa9.38□□□□□ -0.91
VPS11-208ENST00000621676 H2BFMP0C1H6 154 aa9.38□□□□□ -0.91
VPS11-208ENST00000621676 UQCRC1P31930 480 aa9.38□□□□□ -0.91
VPS11-208ENST00000621676 APOBEC1P41238 236 aaKnown RBP9.38□□□□□ -0.91
VPS11-208ENST00000621676 MEOX1P50221 254 aa9.38□□□□□ -0.91
VPS11-208ENST00000621676 TEKQ02763 1124 aa9.38□□□□□ -0.91
VPS11-208ENST00000621676 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.38□□□□□ -0.91
VPS11-208ENST00000621676 TIMM50Q3ZCQ8 353 aa9.38□□□□□ -0.91
VPS11-208ENST00000621676 TUBA3EQ6PEY2 450 aa9.38□□□□□ -0.91
VPS11-208ENST00000621676 DBX2Q6ZNG2 339 aa9.38□□□□□ -0.91
VPS11-208ENST00000621676 FAM57BQ71RH2 274 aa9.38□□□□□ -0.91
VPS11-208ENST00000621676 TUSC5Q8IXB3 177 aa9.38□□□□□ -0.91
VPS11-208ENST00000621676 ZNF283Q8N7M2 679 aa9.38□□□□□ -0.91
VPS11-208ENST00000621676 FNDC8Q8TC99 324 aa9.38□□□□□ -0.91
VPS11-208ENST00000621676 TTC9Q92623 222 aa9.38□□□□□ -0.91
VPS11-208ENST00000621676 FGF11Q92914 225 aa9.38□□□□□ -0.91
VPS11-208ENST00000621676 EXTL1Q92935 676 aa9.38□□□□□ -0.91
VPS11-208ENST00000621676 LIN37Q96GY3 246 aaPredicted RBP9.38□□□□□ -0.91
VPS11-208ENST00000621676 NEDD4LQ96PU5 975 aa9.38□□□□□ -0.91
VPS11-208ENST00000621676 ZNF649Q9BS31 505 aa9.38□□□□□ -0.91
VPS11-208ENST00000621676 SMURF1Q9HCE7 757 aa9.38□□□□□ -0.91
VPS11-208ENST00000621676 DLL3Q9NYJ7 618 aa9.38□□□□□ -0.91
VPS11-208ENST00000621676 PCDHGB1Q9Y5G3 927 aa9.38□□□□□ -0.91
VPS11-208ENST00000621676 TRAV8-7A0A075B6U6 113 aa9.37□□□□□ -0.91
VPS11-208ENST00000621676 TMIGD3P0DMS9 266 aaPredicted RBP9.37□□□□□ -0.91
VPS11-208ENST00000621676 OR6Q1Q8NGQ2 317 aa9.37□□□□□ -0.91
VPS11-208ENST00000621676 ADAMTS14Q8WXS8 1223 aa9.37□□□□□ -0.91
VPS11-208ENST00000621676 SLC26A1Q9H2B4 701 aa9.37□□□□□ -0.91
VPS11-208ENST00000621676 HMG20AQ9NP66 347 aa9.37□□□□□ -0.91
VPS11-208ENST00000621676 NDUFB11Q9NX14 153 aa9.37□□□□□ -0.91
VPS11-208ENST00000621676 B3GAT1Q9P2W7 334 aa9.37□□□□□ -0.91
VPS11-208ENST00000621676 SPNP16150 400 aa9.37□□□□□ -0.91
VPS11-208ENST00000621676 HSD11B1P28845 292 aa9.37□□□□□ -0.91
VPS11-208ENST00000621676 NKX2-5P52952 324 aaPredicted RBP9.37□□□□□ -0.91
VPS11-208ENST00000621676 FAPQ12884 760 aa9.37□□□□□ -0.91
VPS11-208ENST00000621676 STK11Q15831 433 aa9.37□□□□□ -0.91
VPS11-208ENST00000621676 AGAP7PQ5VUJ5 663 aa9.37□□□□□ -0.91
VPS11-208ENST00000621676 CNIH2Q6PI25 160 aa9.37□□□□□ -0.91
VPS11-208ENST00000621676 CFAP77Q6ZQR2 320 aa9.37□□□□□ -0.91
VPS11-208ENST00000621676 CENPSQ8N2Z9 138 aa9.37□□□□□ -0.91
VPS11-208ENST00000621676 TMEM251Q8N6I4 163 aa9.37□□□□□ -0.91
VPS11-208ENST00000621676 OR5AK2Q8NH90 309 aa9.37□□□□□ -0.91
VPS11-208ENST00000621676 MCHR2Q969V1 340 aa9.37□□□□□ -0.91
VPS11-208ENST00000621676 AGAP4Q96P64 663 aa9.37□□□□□ -0.91
VPS11-208ENST00000621676 TMEM43Q9BTV4 400 aa9.37□□□□□ -0.91
VPS11-208ENST00000621676 ULBP2Q9BZM5 246 aa9.37□□□□□ -0.91
VPS11-208ENST00000621676 TCF7L1Q9HCS4 588 aa9.37□□□□□ -0.91
VPS11-208ENST00000621676 LRRK2Q5S007 2527 aa9.37□□□□□ -0.91
VPS11-208ENST00000621676 A0A0G2JMP0 313 aa9.36□□□□□ -0.91
VPS11-208ENST00000621676 A0A0X1KG70 313 aa9.36□□□□□ -0.91
VPS11-208ENST00000621676 METTL15A6NJ78 407 aa9.36□□□□□ -0.91
VPS11-208ENST00000621676 BOLA2-SMG1P6H3BVE0 249 aa9.36□□□□□ -0.91
VPS11-208ENST00000621676 DLL1O00548 723 aa9.36□□□□□ -0.91
VPS11-208ENST00000621676 GFRA3O60609 400 aa9.36□□□□□ -0.91
VPS11-208ENST00000621676 CBR3O75828 277 aa9.36□□□□□ -0.91
VPS11-208ENST00000621676 HLA-HP01893 362 aa9.36□□□□□ -0.91
VPS11-208ENST00000621676 MYL9P24844 172 aa9.36□□□□□ -0.91
VPS11-208ENST00000621676 WDR38Q5JTN6 314 aa9.36□□□□□ -0.91
VPS11-208ENST00000621676 SPATA46Q5T0L3 261 aa9.36□□□□□ -0.91
VPS11-208ENST00000621676 STEAP3Q658P3 488 aa9.36□□□□□ -0.91
VPS11-208ENST00000621676 CRYBG3Q68DQ2 2970 aa9.36□□□□□ -0.91
VPS11-208ENST00000621676 RPL13AP3Q6NVV1 102 aa9.36□□□□□ -0.91
VPS11-208ENST00000621676 ZNF585AQ6P3V2 769 aa9.36□□□□□ -0.91
VPS11-208ENST00000621676 ZNF517Q6ZMY9 492 aaPredicted RBP9.36□□□□□ -0.91
VPS11-208ENST00000621676 FCRLAQ7L513 359 aa9.36□□□□□ -0.91
VPS11-208ENST00000621676 ABHD12BQ7Z5M8 362 aaPredicted RBP9.36□□□□□ -0.91
VPS11-208ENST00000621676 LRRC75AQ8NAA5 344 aa9.36□□□□□ -0.91
VPS11-208ENST00000621676 OR4M2Q8NGB6 313 aa9.36□□□□□ -0.91
VPS11-208ENST00000621676 OR51E1Q8TCB6 317 aa9.36□□□□□ -0.91
VPS11-208ENST00000621676 NR4A3Q92570 626 aa9.36□□□□□ -0.91
VPS11-208ENST00000621676 CCDC120Q96HB5 630 aa9.36□□□□□ -0.91
VPS11-208ENST00000621676 MS4A3Q96HJ5 214 aa9.36□□□□□ -0.91
VPS11-208ENST00000621676 LOXL4Q96JB6 756 aa9.36□□□□□ -0.91
VPS11-208ENST00000621676 B3GNT4Q9C0J1 378 aa9.36□□□□□ -0.91
VPS11-208ENST00000621676 EXTL2Q9UBQ6 330 aa9.36□□□□□ -0.91
VPS11-208ENST00000621676 TNRC6AQ8NDV7 1962 aaKnown RBP9.36□□□□□ -0.91
VPS11-208ENST00000621676 FTCDNL1E5RQL4 147 aa9.36□□□□□ -0.91
VPS11-208ENST00000621676 HNRNPCP07910 306 aaKnown RBP eCLIP9.36□□□□□ -0.91
VPS11-208ENST00000621676 GUSBP08236 651 aa9.36□□□□□ -0.91
VPS11-208ENST00000621676 CD79AP11912 226 aa9.36□□□□□ -0.91
VPS11-208ENST00000621676 CPEP16870 476 aa9.36□□□□□ -0.91
VPS11-208ENST00000621676 RASGEF1BQ0VAM2 473 aa9.36□□□□□ -0.91
VPS11-208ENST00000621676 RAB43Q86YS6 212 aa9.36□□□□□ -0.91
VPS11-208ENST00000621676 OR2M7Q8NG81 312 aa9.36□□□□□ -0.91
VPS11-208ENST00000621676 OR13C9Q8NGT0 318 aa9.36□□□□□ -0.91
VPS11-208ENST00000621676 OR2AJ1Q8NGZ0 328 aa9.36□□□□□ -0.91
VPS11-208ENST00000621676 PAQR8Q8TEZ7 354 aa9.36□□□□□ -0.91
VPS11-208ENST00000621676 UBASH3BQ8TF42 649 aa9.36□□□□□ -0.91
VPS11-208ENST00000621676 MIB2Q96AX9 1013 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms