RNA–Protein interactions for RNA: ENST00000620992.4

PTPDC1-204, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPDC1, Length 4,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-204ENST00000620992 TMEM43Q9BTV4 400 aa7.54□□□□□ -1.2
PTPDC1-204ENST00000620992 PPP1R3EQ9H7J1 279 aa7.54□□□□□ -1.2
PTPDC1-204ENST00000620992 RASD1Q9Y272 281 aa7.54□□□□□ -1.2
PTPDC1-204ENST00000620992 A0A0C4DFX4 3053 aa7.54□□□□□ -1.2
PTPDC1-204ENST00000620992 SPTY2D1-AS1A0A0U1RR47 76 aa7.54□□□□□ -1.2
PTPDC1-204ENST00000620992 SYT5O00445 386 aa7.54□□□□□ -1.2
PTPDC1-204ENST00000620992 RGS9O75916 674 aaPredicted RBP7.54□□□□□ -1.2
PTPDC1-204ENST00000620992 RGS19P49795 217 aa7.54□□□□□ -1.2
PTPDC1-204ENST00000620992 DAP3P51398 398 aaKnown RBP7.54□□□□□ -1.2
PTPDC1-204ENST00000620992 MTCP1P56278 107 aa7.54□□□□□ -1.2
PTPDC1-204ENST00000620992 OR10A3P58181 314 aa7.54□□□□□ -1.2
PTPDC1-204ENST00000620992 ACTA2P62736 377 aa7.54□□□□□ -1.2
PTPDC1-204ENST00000620992 ACTG2P63267 376 aa7.54□□□□□ -1.2
PTPDC1-204ENST00000620992 GPLD1P80108 840 aa7.54□□□□□ -1.2
PTPDC1-204ENST00000620992 MYBPHQ13203 477 aa7.54□□□□□ -1.2
PTPDC1-204ENST00000620992 NTRK2Q16620 822 aa7.54□□□□□ -1.2
PTPDC1-204ENST00000620992 COL28A1Q2UY09 1125 aa7.54□□□□□ -1.2
PTPDC1-204ENST00000620992 MKXQ8IYA7 352 aa7.54□□□□□ -1.2
PTPDC1-204ENST00000620992 PM20D2Q8IYS1 436 aa7.54□□□□□ -1.2
PTPDC1-204ENST00000620992 COQ8AQ8NI60 647 aa7.54□□□□□ -1.2
PTPDC1-204ENST00000620992 GLYATL2Q8WU03 294 aa7.54□□□□□ -1.2
PTPDC1-204ENST00000620992 GNRHR2Q96P88 292 aa7.54□□□□□ -1.2
PTPDC1-204ENST00000620992 PITHD1Q9GZP4 211 aaPredicted RBP7.54□□□□□ -1.2
PTPDC1-204ENST00000620992 RNF32Q9H0A6 362 aa7.54□□□□□ -1.2
PTPDC1-204ENST00000620992 EMC7Q9NPA0 242 aa7.54□□□□□ -1.2
PTPDC1-204ENST00000620992 ZNF355PQ9NSJ1 428 aa7.54□□□□□ -1.2
PTPDC1-204ENST00000620992 CENPVL1A0A0U1RR11 272 aa7.54□□□□□ -1.2
PTPDC1-204ENST00000620992 AGPAT2O15120 278 aa7.54□□□□□ -1.2
PTPDC1-204ENST00000620992 PDGFBP01127 241 aaPredicted RBP7.54□□□□□ -1.2
PTPDC1-204ENST00000620992 ERCC1P07992 297 aaPredicted RBP7.54□□□□□ -1.2
PTPDC1-204ENST00000620992 FAM157BP0CG42 384 aa7.54□□□□□ -1.2
PTPDC1-204ENST00000620992 GABREP78334 506 aa7.54□□□□□ -1.2
PTPDC1-204ENST00000620992 FGL1Q08830 312 aa7.54□□□□□ -1.2
PTPDC1-204ENST00000620992 PCGF3Q3KNV8 242 aa7.54□□□□□ -1.2
PTPDC1-204ENST00000620992 EXOSC6Q5RKV6 272 aaKnown RBP7.54□□□□□ -1.2
PTPDC1-204ENST00000620992 ANKRD16Q6P6B7 361 aa7.54□□□□□ -1.2
PTPDC1-204ENST00000620992 MBOAT2Q6ZWT7 520 aa7.54□□□□□ -1.2
PTPDC1-204ENST00000620992 FAM181AQ8N9Y4 354 aa7.54□□□□□ -1.2
PTPDC1-204ENST00000620992 ZNF610Q8N9Z0 462 aa7.54□□□□□ -1.2
PTPDC1-204ENST00000620992 OR4D6Q8NGJ1 314 aa7.54□□□□□ -1.2
PTPDC1-204ENST00000620992 C16orf52Q8NHV5 167 aa7.54□□□□□ -1.2
PTPDC1-204ENST00000620992 ZNF417Q8TAU3 575 aa7.54□□□□□ -1.2
PTPDC1-204ENST00000620992 AKAP1Q92667 903 aaKnown RBP eCLIP7.54□□□□□ -1.2
PTPDC1-204ENST00000620992 ZNF587Q96SQ5 575 aaPredicted RBP7.54□□□□□ -1.2
PTPDC1-204ENST00000620992 NKX3-1Q99801 234 aaPredicted RBP7.54□□□□□ -1.2
PTPDC1-204ENST00000620992 ALG12Q9BV10 488 aa7.54□□□□□ -1.2
PTPDC1-204ENST00000620992 BABAM2Q9NXR7 383 aa7.54□□□□□ -1.2
PTPDC1-204ENST00000620992 IL20Q9NYY1 176 aa7.54□□□□□ -1.2
PTPDC1-204ENST00000620992 HRH3Q9Y5N1 445 aa7.54□□□□□ -1.2
PTPDC1-204ENST00000620992 LMO7DNF2Z398 122 aa7.53□□□□□ -1.2
PTPDC1-204ENST00000620992 KLRC4-KLRK1H3BQV0 150 aa7.53□□□□□ -1.2
PTPDC1-204ENST00000620992 CHP2O43745 196 aa7.53□□□□□ -1.2
PTPDC1-204ENST00000620992 SLC35E2P0CK97 266 aa7.53□□□□□ -1.2
PTPDC1-204ENST00000620992 IFNGR1P15260 489 aa7.53□□□□□ -1.2
PTPDC1-204ENST00000620992 GLB1P16278 677 aa7.53□□□□□ -1.2
PTPDC1-204ENST00000620992 NFYBP25208 207 aa7.53□□□□□ -1.2
PTPDC1-204ENST00000620992 EVI2BP34910 448 aa7.53□□□□□ -1.2
PTPDC1-204ENST00000620992 DRD3P35462 400 aa7.53□□□□□ -1.2
PTPDC1-204ENST00000620992 SRP9P49458 86 aaKnown RBP7.53□□□□□ -1.2
PTPDC1-204ENST00000620992 EFNB1P98172 346 aa7.53□□□□□ -1.2
PTPDC1-204ENST00000620992 ZNF616Q08AN1 781 aa7.53□□□□□ -1.2
PTPDC1-204ENST00000620992 ALKBH6Q3KRA9 238 aa7.53□□□□□ -1.2
PTPDC1-204ENST00000620992 LYPD8Q6UX82 237 aa7.53□□□□□ -1.2
PTPDC1-204ENST00000620992 PNPLA5Q7Z6Z6 429 aaPredicted RBP7.53□□□□□ -1.2
PTPDC1-204ENST00000620992 C1orf210Q8IVY1 113 aa7.53□□□□□ -1.2
PTPDC1-204ENST00000620992 SLC35F3Q8IY50 421 aa7.53□□□□□ -1.2
PTPDC1-204ENST00000620992 UBALD2Q8IYN6 164 aa7.53□□□□□ -1.2
PTPDC1-204ENST00000620992 MS4A15Q8N5U1 240 aa7.53□□□□□ -1.2
PTPDC1-204ENST00000620992 TMEM178AQ8NBL3 297 aa7.53□□□□□ -1.2
PTPDC1-204ENST00000620992 OR4M1Q8NGD0 313 aa7.53□□□□□ -1.2
PTPDC1-204ENST00000620992 CD300LFQ8TDQ1 290 aa7.53□□□□□ -1.2
PTPDC1-204ENST00000620992 C17orf50Q8WW18 174 aa7.53□□□□□ -1.2
PTPDC1-204ENST00000620992 TMEM106AQ96A25 262 aa7.53□□□□□ -1.2
PTPDC1-204ENST00000620992 ARHGDIGQ99819 225 aa7.53□□□□□ -1.2
PTPDC1-204ENST00000620992 THAP7Q9BT49 309 aaPredicted RBP7.53□□□□□ -1.2
PTPDC1-204ENST00000620992 GNG12Q9UBI6 72 aa7.53□□□□□ -1.2
PTPDC1-204ENST00000620992 JMJD1CQ15652 2540 aa7.53□□□□□ -1.2
PTPDC1-204ENST00000620992 IGHV5-51A0A0C4DH38 117 aa7.53□□□□□ -1.2
PTPDC1-204ENST00000620992 TNFRSF10CO14798 259 aa7.53□□□□□ -1.2
PTPDC1-204ENST00000620992 SLC19A2O60779 497 aa7.53□□□□□ -1.2
PTPDC1-204ENST00000620992 STK17BO94768 372 aa7.53□□□□□ -1.2
PTPDC1-204ENST00000620992 CCL4P13236 92 aa7.53□□□□□ -1.2
PTPDC1-204ENST00000620992 IL2RGP31785 369 aa7.53□□□□□ -1.2
PTPDC1-204ENST00000620992 PRSS3P35030 304 aa7.53□□□□□ -1.2
PTPDC1-204ENST00000620992 RRAS2P62070 204 aaPredicted RBP7.53□□□□□ -1.2
PTPDC1-204ENST00000620992 CXADRP78310 365 aa7.53□□□□□ -1.2
PTPDC1-204ENST00000620992 MFAP5Q13361 173 aa7.53□□□□□ -1.2
PTPDC1-204ENST00000620992 MEP1BQ16820 701 aa7.53□□□□□ -1.2
PTPDC1-204ENST00000620992 YIF1BQ5BJH7 314 aa7.53□□□□□ -1.2
PTPDC1-204ENST00000620992 ZNF836Q6ZNA1 936 aa7.53□□□□□ -1.2
PTPDC1-204ENST00000620992 NDUFAF7Q7L592 441 aa7.53□□□□□ -1.2
PTPDC1-204ENST00000620992 SYT9Q86SS6 491 aa7.53□□□□□ -1.2
PTPDC1-204ENST00000620992 PDCD1LG2Q9BQ51 273 aa7.53□□□□□ -1.2
PTPDC1-204ENST00000620992 LMF2Q9BU23 707 aaKnown RBP7.53□□□□□ -1.2
PTPDC1-204ENST00000620992 ISYNA1Q9NPH2 558 aa7.53□□□□□ -1.2
PTPDC1-204ENST00000620992 MRPS18AQ9NVS2 196 aaKnown RBP7.53□□□□□ -1.2
PTPDC1-204ENST00000620992 HHLA2Q9UM44 414 aa7.53□□□□□ -1.2
PTPDC1-204ENST00000620992 SPEF1Q9Y4P9 236 aa7.53□□□□□ -1.2
PTPDC1-204ENST00000620992 SIRT4Q9Y6E7 314 aaPredicted RBP7.53□□□□□ -1.2
PTPDC1-204ENST00000620992 MKRN2OSH3BPM6 223 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms