RNA–Protein interactions for RNA: ENST00000620676.4

VPS13D-214, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13D, Length 16,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-214ENST00000620676 OR2F2O95006 317 aa4.62□□□□□ -1.67
VPS13D-214ENST00000620676 HOXB1P14653 301 aaPredicted RBP4.62□□□□□ -1.67
VPS13D-214ENST00000620676 PTPRZ1P23471 2315 aaPredicted RBP4.62□□□□□ -1.67
VPS13D-214ENST00000620676 SNCAP37840 140 aa4.62□□□□□ -1.67
VPS13D-214ENST00000620676 OR2F1Q13607 317 aa4.62□□□□□ -1.67
VPS13D-214ENST00000620676 IQCJQ1A5X6 159 aa4.62□□□□□ -1.67
VPS13D-214ENST00000620676 DEFB115Q30KQ5 88 aa4.62□□□□□ -1.67
VPS13D-214ENST00000620676 OR4C11Q6IEV9 310 aa4.62□□□□□ -1.67
VPS13D-214ENST00000620676 UQCC3Q6UW78 93 aa4.62□□□□□ -1.67
VPS13D-214ENST00000620676 GTF2H5Q6ZYL4 71 aa4.62□□□□□ -1.67
VPS13D-214ENST00000620676 ZNF100Q8IYN0 542 aa4.62□□□□□ -1.67
VPS13D-214ENST00000620676 CORO2AQ92828 525 aa4.62□□□□□ -1.67
VPS13D-214ENST00000620676 TEPSINQ96N21 525 aa4.62□□□□□ -1.67
VPS13D-214ENST00000620676 HIST1H2AAQ96QV6 131 aa4.62□□□□□ -1.67
VPS13D-214ENST00000620676 RIMS4Q9H426 269 aaPredicted RBP4.62□□□□□ -1.67
VPS13D-214ENST00000620676 H7BYZ3 331 aa4.62□□□□□ -1.67
VPS13D-214ENST00000620676 SCDO00767 359 aa4.62□□□□□ -1.67
VPS13D-214ENST00000620676 NUDT21O43809 227 aaKnown RBP4.62□□□□□ -1.67
VPS13D-214ENST00000620676 TBX19O60806 448 aa4.62□□□□□ -1.67
VPS13D-214ENST00000620676 ZNF888P0CJ79 500 aaPredicted RBP4.62□□□□□ -1.67
VPS13D-214ENST00000620676 VSIG10L2P0DP72 767 aa4.62□□□□□ -1.67
VPS13D-214ENST00000620676 ENDOGQ14249 297 aaKnown RBP4.62□□□□□ -1.67
VPS13D-214ENST00000620676 PABPC1L2AQ5JQF8 200 aa4.62□□□□□ -1.67
VPS13D-214ENST00000620676 FAM173AQ9BQD7 235 aa4.62□□□□□ -1.67
VPS13D-214ENST00000620676 GPR61Q9BZJ8 451 aa4.62□□□□□ -1.67
VPS13D-214ENST00000620676 ALKBH4Q9NXW9 302 aa4.62□□□□□ -1.67
VPS13D-214ENST00000620676 UPK1AO00322 258 aa4.62□□□□□ -1.67
VPS13D-214ENST00000620676 GRM6O15303 877 aa4.62□□□□□ -1.67
VPS13D-214ENST00000620676 ZNF205O95201 554 aa4.62□□□□□ -1.67
VPS13D-214ENST00000620676 ZNF280AP59817 542 aaPredicted RBP4.62□□□□□ -1.67
VPS13D-214ENST00000620676 GPNMBQ14956 572 aa4.62□□□□□ -1.67
VPS13D-214ENST00000620676 SBSNQ6UWP8 590 aa4.62□□□□□ -1.67
VPS13D-214ENST00000620676 LINC00346Q8IVM7 164 aa4.62□□□□□ -1.67
VPS13D-214ENST00000620676 TRMT2BQ96GJ1 504 aaKnown RBP4.62□□□□□ -1.67
VPS13D-214ENST00000620676 TBL1XR1Q9BZK7 514 aa4.62□□□□□ -1.67
VPS13D-214ENST00000620676 TLNRD1Q9H1K6 362 aa4.62□□□□□ -1.67
VPS13D-214ENST00000620676 ZDHHC11Q9H8X9 412 aa4.62□□□□□ -1.67
VPS13D-214ENST00000620676 ENY2Q9NPA8 101 aa4.62□□□□□ -1.67
VPS13D-214ENST00000620676 SERTM2A0A1B0GWG4 89 aa4.62□□□□□ -1.67
VPS13D-214ENST00000620676 TEAD1P28347 426 aa4.62□□□□□ -1.67
VPS13D-214ENST00000620676 RGRP47804 291 aa4.62□□□□□ -1.67
VPS13D-214ENST00000620676 EMP2P54851 167 aa4.62□□□□□ -1.67
VPS13D-214ENST00000620676 TLE3Q04726 772 aa4.62□□□□□ -1.67
VPS13D-214ENST00000620676 ERV3-1Q14264 604 aa4.62□□□□□ -1.67
VPS13D-214ENST00000620676 SLC39A9Q9NUM3 307 aa4.62□□□□□ -1.67
VPS13D-214ENST00000620676 NFKBIEO00221 500 aa4.62□□□□□ -1.67
VPS13D-214ENST00000620676 IDSP22304 550 aa4.62□□□□□ -1.67
VPS13D-214ENST00000620676 CTSSP25774 331 aa4.62□□□□□ -1.67
VPS13D-214ENST00000620676 VGLL4Q14135 290 aa4.62□□□□□ -1.67
VPS13D-214ENST00000620676 ZNF74Q16587 644 aa4.62□□□□□ -1.67
VPS13D-214ENST00000620676 PLPP6Q8IY26 295 aa4.62□□□□□ -1.67
VPS13D-214ENST00000620676 ADAD2Q8NCV1 583 aaKnown RBP4.62□□□□□ -1.67
VPS13D-214ENST00000620676 ZNF417Q8TAU3 575 aa4.62□□□□□ -1.67
VPS13D-214ENST00000620676 INSL5Q9Y5Q6 135 aa4.62□□□□□ -1.67
VPS13D-214ENST00000620676 FGF18O76093 207 aa4.62□□□□□ -1.67
VPS13D-214ENST00000620676 GP1BBP13224 206 aa4.62□□□□□ -1.67
VPS13D-214ENST00000620676 TFPI2P48307 235 aa4.62□□□□□ -1.67
VPS13D-214ENST00000620676 ZNF620Q6ZNG0 422 aa4.62□□□□□ -1.67
VPS13D-214ENST00000620676 ABHD12BQ7Z5M8 362 aaPredicted RBP4.62□□□□□ -1.67
VPS13D-214ENST00000620676 MARCH3Q86UD3 253 aa4.62□□□□□ -1.67
VPS13D-214ENST00000620676 PPP1R3BQ86XI6 285 aa4.62□□□□□ -1.67
VPS13D-214ENST00000620676 CHST14Q8NCH0 376 aa4.62□□□□□ -1.67
VPS13D-214ENST00000620676 DTD2Q96FN9 168 aa4.62□□□□□ -1.67
VPS13D-214ENST00000620676 C1QTNF2Q9BXJ5 285 aa4.62□□□□□ -1.67
VPS13D-214ENST00000620676 PLA2G3Q9NZ20 509 aa4.62□□□□□ -1.67
VPS13D-214ENST00000620676 PPLO60437 1756 aa4.62□□□□□ -1.67
VPS13D-214ENST00000620676 ADAMTS4O75173 837 aa4.62□□□□□ -1.67
VPS13D-214ENST00000620676 HPNP05981 417 aa4.62□□□□□ -1.67
VPS13D-214ENST00000620676 UQCRFS1P47985 274 aa4.62□□□□□ -1.67
VPS13D-214ENST00000620676 CDC34P49427 236 aaPredicted RBP4.62□□□□□ -1.67
VPS13D-214ENST00000620676 HTRA3P83110 453 aa4.62□□□□□ -1.67
VPS13D-214ENST00000620676 CMTM1Q8IZ96 169 aa4.62□□□□□ -1.67
VPS13D-214ENST00000620676 SLC7A13Q8TCU3 470 aa4.62□□□□□ -1.67
VPS13D-214ENST00000620676 PBX4Q9BYU1 374 aa4.62□□□□□ -1.67
VPS13D-214ENST00000620676 ZNF586Q9NXT0 402 aa4.62□□□□□ -1.67
VPS13D-214ENST00000620676 DLK1P80370 383 aa4.61□□□□□ -1.67
VPS13D-214ENST00000620676 RNASEKQ6P5S7 137 aaKnown RBP4.61□□□□□ -1.67
VPS13D-214ENST00000620676 MTMR14Q8NCE2 650 aa4.61□□□□□ -1.67
VPS13D-214ENST00000620676 MARCH1Q8TCQ1 289 aa4.61□□□□□ -1.67
VPS13D-214ENST00000620676 HOXB13Q92826 284 aaPredicted RBP4.61□□□□□ -1.67
VPS13D-214ENST00000620676 GABARAPL1Q9H0R8 117 aa4.61□□□□□ -1.67
VPS13D-214ENST00000620676 MRPL17Q9NRX2 175 aaKnown RBP4.61□□□□□ -1.67
VPS13D-214ENST00000620676 SLC22A13Q9Y226 551 aa4.61□□□□□ -1.67
VPS13D-214ENST00000620676 EXOGQ9Y2C4 368 aaKnown RBP4.61□□□□□ -1.67
VPS13D-214ENST00000620676 LOXHD1Q8IVV2 1947 aa4.61□□□□□ -1.67
VPS13D-214ENST00000620676 DUXAA6NLW8 204 aa4.61□□□□□ -1.67
VPS13D-214ENST00000620676 IAPPP10997 89 aa4.61□□□□□ -1.67
VPS13D-214ENST00000620676 C5AR1P21730 350 aa4.61□□□□□ -1.67
VPS13D-214ENST00000620676 TM4SF1P30408 202 aa4.61□□□□□ -1.67
VPS13D-214ENST00000620676 YBEYP58557 167 aaPredicted RBP4.61□□□□□ -1.67
VPS13D-214ENST00000620676 CTAG1AP78358 180 aa4.61□□□□□ -1.67
VPS13D-214ENST00000620676 SLC7A9P82251 487 aa4.61□□□□□ -1.67
VPS13D-214ENST00000620676 PJVKQ0ZLH3 352 aa4.61□□□□□ -1.67
VPS13D-214ENST00000620676 RTP3Q9BQQ7 232 aa4.61□□□□□ -1.67
VPS13D-214ENST00000620676 PADI3Q9ULW8 664 aa4.61□□□□□ -1.67
VPS13D-214ENST00000620676 CD300LBA8K4G0 201 aa4.61□□□□□ -1.67
VPS13D-214ENST00000620676 NMBP08949 121 aa4.61□□□□□ -1.67
VPS13D-214ENST00000620676 CPMP14384 443 aa4.61□□□□□ -1.67
VPS13D-214ENST00000620676 RPS4XP62701 263 aaKnown RBP4.61□□□□□ -1.67
VPS13D-214ENST00000620676 PDCD1Q15116 288 aa4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms