RNA–Protein interactions for RNA: ENST00000619300.4

PSPC1-206, Transcript of paraspeckle component 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PSPC1, Length 2,013 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-206ENST00000619300 A0A1W2PRS3 328 aa16.98■□□□□ 0.31
PSPC1-206ENST00000619300 ANKRD61A6NGH8 418 aa16.98■□□□□ 0.31
PSPC1-206ENST00000619300 KIR3DP1A8MWS1 328 aa16.98■□□□□ 0.31
PSPC1-206ENST00000619300 ZNF254O75437 659 aa16.98■□□□□ 0.31
PSPC1-206ENST00000619300 HNRNPCP07910 306 aaKnown RBP eCLIP16.98■□□□□ 0.316e-8■■■□□ 15.1
PSPC1-206ENST00000619300 KLK2P20151 261 aa16.98■□□□□ 0.31
PSPC1-206ENST00000619300 SOX2P48431 317 aa16.98■□□□□ 0.31
PSPC1-206ENST00000619300 CD97P48960 835 aa16.98■□□□□ 0.31
PSPC1-206ENST00000619300 RAC1P63000 192 aa16.98■□□□□ 0.31
PSPC1-206ENST00000619300 TAB1Q15750 504 aa16.98■□□□□ 0.31
PSPC1-206ENST00000619300 JMJD6Q6NYC1 403 aaPredicted RBP16.98■□□□□ 0.31
PSPC1-206ENST00000619300 ZNF227Q86WZ6 799 aa16.98■□□□□ 0.31
PSPC1-206ENST00000619300 NEURL2Q9BR09 285 aa16.98■□□□□ 0.31
PSPC1-206ENST00000619300 SLC25A18Q9H1K4 315 aa16.98■□□□□ 0.31
PSPC1-206ENST00000619300 MRPS18BQ9Y676 258 aaKnown RBP16.98■□□□□ 0.31
PSPC1-206ENST00000619300 PCSK5Q92824 1860 aa16.98■□□□□ 0.31
PSPC1-206ENST00000619300 CACNA1HO95180 2353 aa16.97■□□□□ 0.31
PSPC1-206ENST00000619300 GPR171O14626 319 aa16.97■□□□□ 0.31
PSPC1-206ENST00000619300 EIF1BO60739 113 aaKnown RBP16.97■□□□□ 0.31
PSPC1-206ENST00000619300 PNPP00491 289 aa16.97■□□□□ 0.31
PSPC1-206ENST00000619300 RAF1P04049 648 aa16.97■□□□□ 0.31
PSPC1-206ENST00000619300 SRD5A2P31213 254 aa16.97■□□□□ 0.31
PSPC1-206ENST00000619300 ASAH1Q13510 395 aa16.97■□□□□ 0.31
PSPC1-206ENST00000619300 TOMM20Q15388 145 aa16.97■□□□□ 0.31
PSPC1-206ENST00000619300 OR7E24Q6IFN5 339 aa16.97■□□□□ 0.31
PSPC1-206ENST00000619300 DCXRQ7Z4W1 244 aa16.97■□□□□ 0.31
PSPC1-206ENST00000619300 GLRX5Q86SX6 157 aa16.97■□□□□ 0.31
PSPC1-206ENST00000619300 NOXO1Q8NFA2 376 aa16.97■□□□□ 0.31
PSPC1-206ENST00000619300 OR4M1Q8NGD0 313 aa16.97■□□□□ 0.31
PSPC1-206ENST00000619300 ST7LQ8TDW4 575 aa16.97■□□□□ 0.31
PSPC1-206ENST00000619300 C11orf40Q8WZ69 217 aa16.97■□□□□ 0.31
PSPC1-206ENST00000619300 GFI1Q99684 422 aa16.97■□□□□ 0.31
PSPC1-206ENST00000619300 SLITRK2Q9H156 845 aa16.97■□□□□ 0.31
PSPC1-206ENST00000619300 TCF7L1Q9HCS4 588 aa16.97■□□□□ 0.31
PSPC1-206ENST00000619300 PARD6AQ9NPB6 346 aa16.97■□□□□ 0.31
PSPC1-206ENST00000619300 BRD7Q9NPI1 651 aa16.97■□□□□ 0.31
PSPC1-206ENST00000619300 LRP12Q9Y561 859 aa16.97■□□□□ 0.31
PSPC1-206ENST00000619300 TRBV5-7A0A0A0MS05 114 aa16.97■□□□□ 0.31
PSPC1-206ENST00000619300 LINC00854A0A1B0GVQ3 168 aa16.97■□□□□ 0.31
PSPC1-206ENST00000619300 ZNF726A6NNF4 738 aa16.97■□□□□ 0.31
PSPC1-206ENST00000619300 WNT11O96014 354 aa16.97■□□□□ 0.31
PSPC1-206ENST00000619300 SNRPBP14678 240 aaKnown RBP16.97■□□□□ 0.31
PSPC1-206ENST00000619300 LAP3P28838 519 aa16.97■□□□□ 0.31
PSPC1-206ENST00000619300 OC90Q02509 493 aaPredicted RBP16.97■□□□□ 0.31
PSPC1-206ENST00000619300 ODF4Q2M2E3 257 aa16.97■□□□□ 0.31
PSPC1-206ENST00000619300 ZNF544Q6NX49 715 aa16.97■□□□□ 0.31
PSPC1-206ENST00000619300 NRARPQ7Z6K4 114 aa16.97■□□□□ 0.31
PSPC1-206ENST00000619300 OR5H6Q8NGV6 325 aa16.97■□□□□ 0.31
PSPC1-206ENST00000619300 OR10AC1Q8NH08 325 aa16.97■□□□□ 0.31
PSPC1-206ENST00000619300 KNTC1P50748 2209 aa16.97■□□□□ 0.31
PSPC1-206ENST00000619300 A0A0B4J203 849 aa16.96■□□□□ 0.31
PSPC1-206ENST00000619300 STMND1H3BQB6 276 aa16.96■□□□□ 0.31
PSPC1-206ENST00000619300 SSX4O60224 188 aa16.96■□□□□ 0.31
PSPC1-206ENST00000619300 TMEM127O75204 238 aa16.96■□□□□ 0.31
PSPC1-206ENST00000619300 RBMS1P29558 406 aaKnown RBP16.96■□□□□ 0.31
PSPC1-206ENST00000619300 RFX2P48378 723 aa16.96■□□□□ 0.31
PSPC1-206ENST00000619300 B3GALT5-AS1P59052 145 aa16.96■□□□□ 0.31
PSPC1-206ENST00000619300 CSNK2A1P68400 391 aaPredicted RBP16.96■□□□□ 0.31
PSPC1-206ENST00000619300 DEGS2Q6QHC5 323 aa16.96■□□□□ 0.31
PSPC1-206ENST00000619300 STAC2Q6ZMT1 411 aa16.96■□□□□ 0.31
PSPC1-206ENST00000619300 LINC00346Q8IVM7 164 aa16.96■□□□□ 0.31
PSPC1-206ENST00000619300 ZNF433Q8N7K0 673 aaPredicted RBP16.96■□□□□ 0.31
PSPC1-206ENST00000619300 OR10H5Q8NGA6 315 aa16.96■□□□□ 0.31
PSPC1-206ENST00000619300 OR51A4Q8NGJ6 313 aa16.96■□□□□ 0.31
PSPC1-206ENST00000619300 ADAMTS17Q8TE56 1095 aa16.96■□□□□ 0.31
PSPC1-206ENST00000619300 KCNJ15Q99712 375 aa16.96■□□□□ 0.31
PSPC1-206ENST00000619300 NAA11Q9BSU3 229 aaPredicted RBP16.96■□□□□ 0.31
PSPC1-206ENST00000619300 B3GNT4Q9C0J1 378 aa16.96■□□□□ 0.31
PSPC1-206ENST00000619300 SPATA2Q9UM82 520 aa16.96■□□□□ 0.31
PSPC1-206ENST00000619300 SLC22A13Q9Y226 551 aa16.96■□□□□ 0.31
PSPC1-206ENST00000619300 V9GY05 133 aa16.96■□□□□ 0.31
PSPC1-206ENST00000619300 ARPC4-TTLL3A0A0A6YYG9 625 aa16.96■□□□□ 0.3
PSPC1-206ENST00000619300 A0A0G2JMP0 313 aa16.96■□□□□ 0.3
PSPC1-206ENST00000619300 A0A0X1KG70 313 aa16.96■□□□□ 0.3
PSPC1-206ENST00000619300 GJE1A6NN92 205 aa16.96■□□□□ 0.3
PSPC1-206ENST00000619300 IFITM5A6NNB3 132 aa16.96■□□□□ 0.3
PSPC1-206ENST00000619300 HLA-DQB1P01920 261 aa16.96■□□□□ 0.3
PSPC1-206ENST00000619300 HIST3H3Q16695 136 aa16.96■□□□□ 0.3
PSPC1-206ENST00000619300 CARD17Q5XLA6 110 aa16.96■□□□□ 0.3
PSPC1-206ENST00000619300 TRIQKQ629K1 86 aa16.96■□□□□ 0.3
PSPC1-206ENST00000619300 SLC25A47Q6Q0C1 308 aa16.96■□□□□ 0.3
PSPC1-206ENST00000619300 CATSPERDQ86XM0 798 aa16.96■□□□□ 0.3
PSPC1-206ENST00000619300 C19orf18Q8NEA5 215 aa16.96■□□□□ 0.3
PSPC1-206ENST00000619300 IL17RDQ8NFM7 739 aa16.96■□□□□ 0.3
PSPC1-206ENST00000619300 OR4M2Q8NGB6 313 aa16.96■□□□□ 0.3
PSPC1-206ENST00000619300 FREM3P0C091 2139 aa16.95■□□□□ 0.3
PSPC1-206ENST00000619300 A0A0J9YW62 118 aa16.95■□□□□ 0.3
PSPC1-206ENST00000619300 LRRC3CA6NJW4 275 aa16.95■□□□□ 0.3
PSPC1-206ENST00000619300 AIPO00170 330 aa16.95■□□□□ 0.3
PSPC1-206ENST00000619300 TLX3O43711 291 aaPredicted RBP16.95■□□□□ 0.3
PSPC1-206ENST00000619300 VAMP5O95183 116 aa16.95■□□□□ 0.3
PSPC1-206ENST00000619300 CNR1P21554 472 aa16.95■□□□□ 0.3
PSPC1-206ENST00000619300 PITPNBP48739 271 aa16.95■□□□□ 0.3
PSPC1-206ENST00000619300 GPR85P60893 370 aa16.95■□□□□ 0.3
PSPC1-206ENST00000619300 MFGE8Q08431 387 aaPredicted RBP16.95■□□□□ 0.3
PSPC1-206ENST00000619300 DCAF10Q5QP82 559 aa16.95■□□□□ 0.3
PSPC1-206ENST00000619300 YRDCQ86U90 279 aaKnown RBP16.95■□□□□ 0.3
PSPC1-206ENST00000619300 ZNF671Q8TAW3 534 aa16.95■□□□□ 0.3
PSPC1-206ENST00000619300 THRSPQ92748 146 aa16.95■□□□□ 0.3
PSPC1-206ENST00000619300 MCHR2Q969V1 340 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms