RNA–Protein interactions for RNA: ENST00000618902.1

SHMT1-211, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 5 BASIC

Gene SHMT1, Length 378 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-211ENST00000618902 ALG10BQ5I7T1 473 aa4.65□□□□□ -1.67
SHMT1-211ENST00000618902 DDI2Q5TDH0 399 aa4.65□□□□□ -1.67
SHMT1-211ENST00000618902 C1orf140Q5VVS0 124 aa4.65□□□□□ -1.67
SHMT1-211ENST00000618902 AGAP6Q5VW22 663 aa4.65□□□□□ -1.67
SHMT1-211ENST00000618902 STEAP3Q658P3 488 aa4.65□□□□□ -1.67
SHMT1-211ENST00000618902 ABLIM2Q6H8Q1 611 aa4.65□□□□□ -1.67
SHMT1-211ENST00000618902 RPL13AP3Q6NVV1 102 aa4.65□□□□□ -1.67
SHMT1-211ENST00000618902 MZT2BQ6NZ67 158 aa4.65□□□□□ -1.67
SHMT1-211ENST00000618902 ZNF613Q6PF04 617 aa4.65□□□□□ -1.67
SHMT1-211ENST00000618902 KLHL17Q6TDP4 642 aa4.65□□□□□ -1.67
SHMT1-211ENST00000618902 SPNS3Q6ZMD2 512 aa4.65□□□□□ -1.67
SHMT1-211ENST00000618902 NUFIP2Q7Z417 695 aaKnown RBP4.65□□□□□ -1.67
SHMT1-211ENST00000618902 BTLAQ7Z6A9 289 aa4.65□□□□□ -1.67
SHMT1-211ENST00000618902 CCDC103Q8IW40 242 aa4.65□□□□□ -1.67
SHMT1-211ENST00000618902 TMEM99Q8N816 258 aa4.65□□□□□ -1.67
SHMT1-211ENST00000618902 ZIC4Q8N9L1 334 aa4.65□□□□□ -1.67
SHMT1-211ENST00000618902 AQP11Q8NBQ7 271 aa4.65□□□□□ -1.67
SHMT1-211ENST00000618902 STEAP2Q8NFT2 490 aa4.65□□□□□ -1.67
SHMT1-211ENST00000618902 PFN4Q8NHR9 129 aa4.65□□□□□ -1.67
SHMT1-211ENST00000618902 STK35Q8TDR2 534 aa4.65□□□□□ -1.67
SHMT1-211ENST00000618902 RNF128Q8TEB7 428 aa4.65□□□□□ -1.67
SHMT1-211ENST00000618902 TMEM255BQ8WV15 326 aa4.65□□□□□ -1.67
SHMT1-211ENST00000618902 DNAJA4Q8WW22 397 aaPredicted RBP4.65□□□□□ -1.67
SHMT1-211ENST00000618902 HPS1Q92902 700 aa4.65□□□□□ -1.67
SHMT1-211ENST00000618902 ZNF775Q96BV0 537 aaPredicted RBP4.65□□□□□ -1.67
SHMT1-211ENST00000618902 INTS12Q96CB8 462 aaKnown RBP4.65□□□□□ -1.67
SHMT1-211ENST00000618902 KCTD12Q96CX2 325 aaKnown RBP4.65□□□□□ -1.67
SHMT1-211ENST00000618902 DDIT4LQ96D03 193 aa4.65□□□□□ -1.67
SHMT1-211ENST00000618902 STARD4Q96DR4 205 aa4.65□□□□□ -1.67
SHMT1-211ENST00000618902 SLC41A3Q96GZ6 507 aa4.65□□□□□ -1.67
SHMT1-211ENST00000618902 BOD1Q96IK1 185 aa4.65□□□□□ -1.67
SHMT1-211ENST00000618902 RADILQ96JH8 1075 aa4.65□□□□□ -1.67
SHMT1-211ENST00000618902 LURAP1Q96LR2 239 aa4.65□□□□□ -1.67
SHMT1-211ENST00000618902 KCTD7Q96MP8 289 aa4.65□□□□□ -1.67
SHMT1-211ENST00000618902 MOGAT1Q96PD6 335 aa4.65□□□□□ -1.67
SHMT1-211ENST00000618902 NIPSNAP1Q9BPW8 284 aa4.65□□□□□ -1.67
SHMT1-211ENST00000618902 FUZQ9BT04 418 aa4.65□□□□□ -1.67
SHMT1-211ENST00000618902 SF3B5Q9BWJ5 86 aaKnown RBP4.65□□□□□ -1.67
SHMT1-211ENST00000618902 ASPNQ9BXN1 380 aa4.65□□□□□ -1.67
SHMT1-211ENST00000618902 POTEKPQ9BYX7 375 aa4.65□□□□□ -1.67
SHMT1-211ENST00000618902 PRRG4Q9BZD6 226 aa4.65□□□□□ -1.67
SHMT1-211ENST00000618902 C6orf62Q9GZU0 229 aaPredicted RBP4.65□□□□□ -1.67
SHMT1-211ENST00000618902 SLC22A4Q9H015 551 aa4.65□□□□□ -1.67
SHMT1-211ENST00000618902 BCO1Q9HAY6 547 aa4.65□□□□□ -1.67
SHMT1-211ENST00000618902 TMEM27Q9HBJ8 222 aa4.65□□□□□ -1.67
SHMT1-211ENST00000618902 MEPEQ9NQ76 525 aaPredicted RBP4.65□□□□□ -1.67
SHMT1-211ENST00000618902 INPP5EQ9NRR6 644 aa4.65□□□□□ -1.67
SHMT1-211ENST00000618902 ZNF275Q9NSD4 429 aaPredicted RBP4.65□□□□□ -1.67
SHMT1-211ENST00000618902 PARPBPQ9NWS1 579 aa4.65□□□□□ -1.67
SHMT1-211ENST00000618902 ASB6Q9NWX5 421 aa4.65□□□□□ -1.67
SHMT1-211ENST00000618902 NDUFB11Q9NX14 153 aa4.65□□□□□ -1.67
SHMT1-211ENST00000618902 EMC3Q9P0I2 261 aa4.65□□□□□ -1.67
SHMT1-211ENST00000618902 H2AFY2Q9P0M6 372 aaPredicted RBP4.65□□□□□ -1.67
SHMT1-211ENST00000618902 RHCGQ9UBD6 479 aa4.65□□□□□ -1.67
SHMT1-211ENST00000618902 FBXO9Q9UK97 447 aaPredicted RBP4.65□□□□□ -1.67
SHMT1-211ENST00000618902 SLC13A4Q9UKG4 626 aa4.65□□□□□ -1.67
SHMT1-211ENST00000618902 SLC7A7Q9UM01 511 aa4.65□□□□□ -1.67
SHMT1-211ENST00000618902 GPR52Q9Y2T5 361 aa4.65□□□□□ -1.67
SHMT1-211ENST00000618902 PMF1-BGLAPU3KQ54 211 aa4.65□□□□□ -1.67
SHMT1-211ENST00000618902 ZANQ9Y493 2812 aa4.65□□□□□ -1.67
SHMT1-211ENST00000618902 ACANP16112 2415 aa4.65□□□□□ -1.67
SHMT1-211ENST00000618902 IGKV3D-15A0A087WSY6 115 aa4.64□□□□□ -1.67
SHMT1-211ENST00000618902 A0A087WUU8 490 aa4.64□□□□□ -1.67
SHMT1-211ENST00000618902 TRBV4-1A0A0J9YWV2 114 aa4.64□□□□□ -1.67
SHMT1-211ENST00000618902 TRDV1A0A1B0GX56 115 aa4.64□□□□□ -1.67
SHMT1-211ENST00000618902 ANKRD61A6NGH8 418 aa4.64□□□□□ -1.67
SHMT1-211ENST00000618902 ELOA3DA6NLF2 546 aaPredicted RBP4.64□□□□□ -1.67
SHMT1-211ENST00000618902 A6NNC1 897 aa4.64□□□□□ -1.67
SHMT1-211ENST00000618902 FAM90A27PA6NNH2 459 aa4.64□□□□□ -1.67
SHMT1-211ENST00000618902 A8MVM7 634 aa4.64□□□□□ -1.67
SHMT1-211ENST00000618902 MS4A18H0YCH9 400 aa4.64□□□□□ -1.67
SHMT1-211ENST00000618902 SULT2B1O00204 365 aa4.64□□□□□ -1.67
SHMT1-211ENST00000618902 MYL12BO14950 172 aa4.64□□□□□ -1.67
SHMT1-211ENST00000618902 CHP2O43745 196 aa4.64□□□□□ -1.67
SHMT1-211ENST00000618902 CYTIPO60759 359 aa4.64□□□□□ -1.67
SHMT1-211ENST00000618902 AKR7A3O95154 331 aa4.64□□□□□ -1.67
SHMT1-211ENST00000618902 PNMTP11086 282 aa4.64□□□□□ -1.67
SHMT1-211ENST00000618902 DBTP11182 482 aaKnown RBP4.64□□□□□ -1.67
SHMT1-211ENST00000618902 FUT1P19526 365 aa4.64□□□□□ -1.67
SHMT1-211ENST00000618902 EPHA2P29317 976 aa4.64□□□□□ -1.67
SHMT1-211ENST00000618902 GRPRP30550 384 aa4.64□□□□□ -1.67
SHMT1-211ENST00000618902 TNFSF8P32971 234 aa4.64□□□□□ -1.67
SHMT1-211ENST00000618902 CD79BP40259 229 aa4.64□□□□□ -1.67
SHMT1-211ENST00000618902 CRYBB2P43320 205 aa4.64□□□□□ -1.67
SHMT1-211ENST00000618902 SLC16A1P53985 500 aa4.64□□□□□ -1.67
SHMT1-211ENST00000618902 FOXG1P55316 489 aaPredicted RBP4.64□□□□□ -1.67
SHMT1-211ENST00000618902 WNT4P56705 351 aa4.64□□□□□ -1.67
SHMT1-211ENST00000618902 PPP3R1P63098 170 aa4.64□□□□□ -1.67
SHMT1-211ENST00000618902 SIRPAP78324 504 aa4.64□□□□□ -1.67
SHMT1-211ENST00000618902 IFITM3Q01628 133 aa4.64□□□□□ -1.67
SHMT1-211ENST00000618902 TGFBR3Q03167 851 aa4.64□□□□□ -1.67
SHMT1-211ENST00000618902 PPP1R8Q12972 351 aaKnown RBP4.64□□□□□ -1.67
SHMT1-211ENST00000618902 TSPAN31Q12999 210 aa4.64□□□□□ -1.67
SHMT1-211ENST00000618902 ASAH1Q13510 395 aa4.64□□□□□ -1.67
SHMT1-211ENST00000618902 FHL1Q13642 323 aa4.64□□□□□ -1.67
SHMT1-211ENST00000618902 TRAM2Q15035 370 aa4.64□□□□□ -1.67
SHMT1-211ENST00000618902 OR7A5Q15622 319 aa4.64□□□□□ -1.67
SHMT1-211ENST00000618902 KCNJ8Q15842 424 aa4.64□□□□□ -1.67
SHMT1-211ENST00000618902 SMN1Q16637 294 aaKnown RBP4.64□□□□□ -1.67
SHMT1-211ENST00000618902 MS4A18Q3C1V0 323 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms