RNA–Protein interactions for RNA: ENST00000618534.4

NEK3-208, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene NEK3, Length 2,414 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-208ENST00000618534 ZMYND11Q15326 602 aa18.38■□□□□ 0.53
NEK3-208ENST00000618534 NR0B2Q15466 257 aa18.38■□□□□ 0.53
NEK3-208ENST00000618534 FAM74A1Q5RGS3 127 aa18.38■□□□□ 0.53
NEK3-208ENST00000618534 ZNF679Q8IYX0 411 aa18.38■□□□□ 0.53
NEK3-208ENST00000618534 OR1J2Q8NGS2 313 aa18.38■□□□□ 0.53
NEK3-208ENST00000618534 RNF128Q8TEB7 428 aa18.38■□□□□ 0.53
NEK3-208ENST00000618534 ASB13Q8WXK3 278 aa18.38■□□□□ 0.53
NEK3-208ENST00000618534 ST8SIA2Q92186 375 aa18.38■□□□□ 0.53
NEK3-208ENST00000618534 TAS2R4Q9NYW5 299 aa18.38■□□□□ 0.53
NEK3-208ENST00000618534 CGGBP1Q9UFW8 167 aaPredicted RBP18.38■□□□□ 0.53
NEK3-208ENST00000618534 FBXO4Q9UKT5 387 aa18.38■□□□□ 0.53
NEK3-208ENST00000618534 B9D1Q9UPM9 204 aa18.38■□□□□ 0.53
NEK3-208ENST00000618534 SIGLEC5O15389 551 aa18.38■□□□□ 0.53
NEK3-208ENST00000618534 WISP1O95388 367 aa18.38■□□□□ 0.53
NEK3-208ENST00000618534 BGLAPP02818 100 aa18.38■□□□□ 0.53
NEK3-208ENST00000618534 AMY2AP04746 511 aa18.38■□□□□ 0.53
NEK3-208ENST00000618534 MELTFP08582 738 aa18.38■□□□□ 0.53
NEK3-208ENST00000618534 CTHP32929 405 aa18.38■□□□□ 0.53
NEK3-208ENST00000618534 HSD17B7P56937 341 aa18.38■□□□□ 0.53
NEK3-208ENST00000618534 SIGLEC14Q08ET2 396 aa18.38■□□□□ 0.53
NEK3-208ENST00000618534 TOMM34Q15785 309 aaPredicted RBP18.38■□□□□ 0.53
NEK3-208ENST00000618534 TMEM92Q6UXU6 159 aa18.38■□□□□ 0.53
NEK3-208ENST00000618534 CHRDL2Q6WN34 429 aa18.38■□□□□ 0.53
NEK3-208ENST00000618534 MDGA2Q7Z553 956 aa18.38■□□□□ 0.53
NEK3-208ENST00000618534 FAM160A2Q8N612 972 aaPredicted RBP18.38■□□□□ 0.53
NEK3-208ENST00000618534 TMEM229BQ8NBD8 167 aa18.38■□□□□ 0.53
NEK3-208ENST00000618534 PXT1Q8NFP0 134 aa18.38■□□□□ 0.53
NEK3-208ENST00000618534 ADOQ96SZ5 270 aa18.38■□□□□ 0.53
NEK3-208ENST00000618534 ADAM19Q9H013 955 aa18.38■□□□□ 0.53
NEK3-208ENST00000618534 B4DGG1 531 aa18.37■□□□□ 0.53
NEK3-208ENST00000618534 ZNF117Q03924 483 aa18.37■□□□□ 0.53
NEK3-208ENST00000618534 TEX30Q5JUR7 227 aa18.37■□□□□ 0.53
NEK3-208ENST00000618534 GLYATL3Q5SZD4 288 aa18.37■□□□□ 0.53
NEK3-208ENST00000618534 BEST3Q8N1M1 668 aa18.37■□□□□ 0.53
NEK3-208ENST00000618534 ADAMTS18Q8TE60 1221 aa18.37■□□□□ 0.53
NEK3-208ENST00000618534 ASB5Q8WWX0 329 aa18.37■□□□□ 0.53
NEK3-208ENST00000618534 METTL21AQ8WXB1 218 aa18.37■□□□□ 0.53
NEK3-208ENST00000618534 SLC41A2Q96JW4 573 aa18.37■□□□□ 0.53
NEK3-208ENST00000618534 MAP3K3Q99759 626 aa18.37■□□□□ 0.53
NEK3-208ENST00000618534 ZMAT3Q9HA38 289 aaKnown RBP18.37■□□□□ 0.53
NEK3-208ENST00000618534 MRPL22Q9NWU5 206 aaKnown RBP18.37■□□□□ 0.53
NEK3-208ENST00000618534 TTLL8A6PVC2 850 aa18.37■□□□□ 0.53
NEK3-208ENST00000618534 ICOSLGO75144 302 aa18.37■□□□□ 0.53
NEK3-208ENST00000618534 APOC3P02656 99 aa18.37■□□□□ 0.53
NEK3-208ENST00000618534 UBBP0CG47 229 aa18.37■□□□□ 0.53
NEK3-208ENST00000618534 UBCP0CG48 685 aaKnown RBP18.37■□□□□ 0.53
NEK3-208ENST00000618534 HTR2CP28335 458 aa18.37■□□□□ 0.53
NEK3-208ENST00000618534 SLC37A1P57057 533 aa18.37■□□□□ 0.53
NEK3-208ENST00000618534 RPS27AP62979 156 aaKnown RBP18.37■□□□□ 0.53
NEK3-208ENST00000618534 UBA52P62987 128 aaKnown RBP18.37■□□□□ 0.53
NEK3-208ENST00000618534 TOMM20Q15388 145 aa18.37■□□□□ 0.53
NEK3-208ENST00000618534 ETFDHQ16134 617 aa18.37■□□□□ 0.53
NEK3-208ENST00000618534 ATPAF1Q5TC12 328 aaPredicted RBP18.37■□□□□ 0.53
NEK3-208ENST00000618534 SLC18B1Q6NT16 456 aa18.37■□□□□ 0.53
NEK3-208ENST00000618534 C17orf107Q6ZR85 190 aa18.37■□□□□ 0.53
NEK3-208ENST00000618534 ASB17Q8WXJ9 295 aa18.37■□□□□ 0.53
NEK3-208ENST00000618534 PMEPA1Q969W9 287 aa18.37■□□□□ 0.53
NEK3-208ENST00000618534 SLC25A36Q96CQ1 311 aa18.37■□□□□ 0.53
NEK3-208ENST00000618534 SLC38A3Q99624 504 aa18.37■□□□□ 0.53
NEK3-208ENST00000618534 SLC25A32Q9H2D1 315 aa18.37■□□□□ 0.53
NEK3-208ENST00000618534 PNO1Q9NRX1 252 aaKnown RBP18.37■□□□□ 0.53
NEK3-208ENST00000618534 MYEF2Q9P2K5 600 aaKnown RBP18.37■□□□□ 0.53
NEK3-208ENST00000618534 SLC16A7O60669 478 aa18.36■□□□□ 0.53
NEK3-208ENST00000618534 MGMTP16455 207 aa18.36■□□□□ 0.53
NEK3-208ENST00000618534 PBX2P40425 430 aa18.36■□□□□ 0.53
NEK3-208ENST00000618534 RABIFP47224 123 aa18.36■□□□□ 0.53
NEK3-208ENST00000618534 GLT8D1Q68CQ7 371 aa18.36■□□□□ 0.53
NEK3-208ENST00000618534 PTPMT1Q8WUK0 201 aaPredicted RBP18.36■□□□□ 0.53
NEK3-208ENST00000618534 RELTQ969Z4 430 aa18.36■□□□□ 0.53
NEK3-208ENST00000618534 SLC25A21Q9BQT8 299 aaPredicted RBP18.36■□□□□ 0.53
NEK3-208ENST00000618534 WDR13Q9H1Z4 485 aa18.36■□□□□ 0.53
NEK3-208ENST00000618534 MRPS18BQ9Y676 258 aaKnown RBP18.36■□□□□ 0.53
NEK3-208ENST00000618534 A0A1W2PPC1 479 aa18.35■□□□□ 0.53
NEK3-208ENST00000618534 PRSS37A4D1T9 235 aa18.35■□□□□ 0.53
NEK3-208ENST00000618534 SULT1C2O00338 296 aa18.35■□□□□ 0.53
NEK3-208ENST00000618534 HCRTR2O43614 444 aa18.35■□□□□ 0.53
NEK3-208ENST00000618534 EIF4E2O60573 245 aaKnown RBP18.35■□□□□ 0.53
NEK3-208ENST00000618534 OR6A2O95222 327 aa18.35■□□□□ 0.53
NEK3-208ENST00000618534 ZNF735P0CB33 412 aa18.35■□□□□ 0.53
NEK3-208ENST00000618534 ICAM2P13598 275 aa18.35■□□□□ 0.53
NEK3-208ENST00000618534 CXCR1P25024 350 aa18.35■□□□□ 0.53
NEK3-208ENST00000618534 PPICP45877 212 aa18.35■□□□□ 0.53
NEK3-208ENST00000618534 ACKR1Q16570 336 aa18.35■□□□□ 0.53
NEK3-208ENST00000618534 OR51A2Q8NGJ7 313 aa18.35■□□□□ 0.53
NEK3-208ENST00000618534 OR10K1Q8NGX5 313 aa18.35■□□□□ 0.53
NEK3-208ENST00000618534 HS3ST3A1Q9Y663 406 aa18.35■□□□□ 0.53
NEK3-208ENST00000618534 DOK2O60496 412 aa18.35■□□□□ 0.53
NEK3-208ENST00000618534 NAT1P18440 290 aa18.35■□□□□ 0.53
NEK3-208ENST00000618534 INSM1Q01101 510 aaPredicted RBP18.35■□□□□ 0.53
NEK3-208ENST00000618534 LRFN4Q6PJG9 635 aa18.35■□□□□ 0.53
NEK3-208ENST00000618534 NUP54Q7Z3B4 507 aa18.35■□□□□ 0.53
NEK3-208ENST00000618534 OR5M8Q8NGP6 311 aa18.35■□□□□ 0.53
NEK3-208ENST00000618534 C8orf44Q96CB5 159 aa18.35■□□□□ 0.53
NEK3-208ENST00000618534 PTDSS2Q9BVG9 487 aa18.35■□□□□ 0.53
NEK3-208ENST00000618534 OR8D2Q9GZM6 311 aa18.35■□□□□ 0.53
NEK3-208ENST00000618534 LAT2Q9GZY6 243 aa18.35■□□□□ 0.53
NEK3-208ENST00000618534 PRMT8Q9NR22 394 aaPredicted RBP18.35■□□□□ 0.53
NEK3-208ENST00000618534 RASL12Q9NYN1 266 aa18.35■□□□□ 0.53
NEK3-208ENST00000618534 CKLFQ9UBR5 152 aa18.35■□□□□ 0.53
NEK3-208ENST00000618534 FARSAQ9Y285 508 aaKnown RBP18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms