RNA–Protein interactions for RNA: ENST00000618500.4

SNCA-213, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,022 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-213ENST00000618500 NOP53Q9NZM5 478 aaKnown RBP3.79□□□□□ -1.8
SNCA-213ENST00000618500 P2RX2Q9UBL9 471 aa3.79□□□□□ -1.8
SNCA-213ENST00000618500 KAAG1Q9UBP8 84 aa3.79□□□□□ -1.8
SNCA-213ENST00000618500 DUSP13Q9UII6 198 aa3.79□□□□□ -1.8
SNCA-213ENST00000618500 DNAJC15Q9Y5T4 150 aa3.79□□□□□ -1.8
SNCA-213ENST00000618500 PRSS51A0A1B0GVH4 220 aa3.78□□□□□ -1.8
SNCA-213ENST00000618500 HTR3EA5X5Y0 456 aa3.78□□□□□ -1.8
SNCA-213ENST00000618500 M0R082 166 aa3.78□□□□□ -1.8
SNCA-213ENST00000618500 AKAP10O43572 662 aa3.78□□□□□ -1.8
SNCA-213ENST00000618500 CDC14BO60729 498 aa3.78□□□□□ -1.8
SNCA-213ENST00000618500 CYP7B1O75881 506 aa3.78□□□□□ -1.8
SNCA-213ENST00000618500 CST2P09228 141 aa3.78□□□□□ -1.8
SNCA-213ENST00000618500 B4GALT1P15291 398 aa3.78□□□□□ -1.8
SNCA-213ENST00000618500 RBMXP38159 391 aaKnown RBP3.78□□□□□ -1.8
SNCA-213ENST00000618500 WNT5AP41221 380 aa3.78□□□□□ -1.8
SNCA-213ENST00000618500 PITPNBP48739 271 aa3.78□□□□□ -1.8
SNCA-213ENST00000618500 FGF12P61328 243 aa3.78□□□□□ -1.8
SNCA-213ENST00000618500 PUDPQ08623 228 aa3.78□□□□□ -1.8
SNCA-213ENST00000618500 WDR25Q64LD2 544 aaPredicted RBP3.78□□□□□ -1.8
SNCA-213ENST00000618500 GLB1L2Q8IW92 636 aa3.78□□□□□ -1.8
SNCA-213ENST00000618500 RBM15BQ8NDT2 890 aaKnown RBP3.78□□□□□ -1.8
SNCA-213ENST00000618500 BEND2Q8NDZ0 799 aa3.78□□□□□ -1.8
SNCA-213ENST00000618500 SPATA4Q8NEY3 305 aa3.78□□□□□ -1.8
SNCA-213ENST00000618500 OR4A15Q8NGL6 344 aa3.78□□□□□ -1.8
SNCA-213ENST00000618500 OR1J1Q8NGS3 322 aa3.78□□□□□ -1.8
SNCA-213ENST00000618500 ZNF417Q8TAU3 575 aa3.78□□□□□ -1.8
SNCA-213ENST00000618500 KLF14Q8TD94 323 aaPredicted RBP3.78□□□□□ -1.8
SNCA-213ENST00000618500 TWIST2Q8WVJ9 160 aa3.78□□□□□ -1.8
SNCA-213ENST00000618500 NMD3Q96D46 503 aaKnown RBP3.78□□□□□ -1.8
SNCA-213ENST00000618500 C3orf30Q96M34 536 aa3.78□□□□□ -1.8
SNCA-213ENST00000618500 WDFY2Q96P53 400 aa3.78□□□□□ -1.8
SNCA-213ENST00000618500 ZNF587Q96SQ5 575 aaPredicted RBP3.78□□□□□ -1.8
SNCA-213ENST00000618500 TRIM31Q9BZY9 425 aa3.78□□□□□ -1.8
SNCA-213ENST00000618500 RASSF4Q9H2L5 321 aa3.78□□□□□ -1.8
SNCA-213ENST00000618500 EPB41L3Q9Y2J2 1087 aaPredicted RBP3.78□□□□□ -1.8
SNCA-213ENST00000618500 NOP16Q9Y3C1 178 aaKnown RBP3.78□□□□□ -1.8
SNCA-213ENST00000618500 ISPDA4D126 451 aa3.78□□□□□ -1.8
SNCA-213ENST00000618500 M0R3G1 203 aa3.78□□□□□ -1.8
SNCA-213ENST00000618500 PLIN3O60664 434 aa3.78□□□□□ -1.8
SNCA-213ENST00000618500 RPS2P15880 293 aaKnown RBP3.78□□□□□ -1.8
SNCA-213ENST00000618500 ECHS1P30084 290 aa3.78□□□□□ -1.8
SNCA-213ENST00000618500 GRPRP30550 384 aa3.78□□□□□ -1.8
SNCA-213ENST00000618500 MPV17P39210 176 aa3.78□□□□□ -1.8
SNCA-213ENST00000618500 CD200P41217 278 aa3.78□□□□□ -1.8
SNCA-213ENST00000618500 CAPZA2P47755 286 aa3.78□□□□□ -1.8
SNCA-213ENST00000618500 SRP9P49458 86 aaKnown RBP3.78□□□□□ -1.8
SNCA-213ENST00000618500 ZNF84P51523 738 aa3.78□□□□□ -1.8
SNCA-213ENST00000618500 PPP1CBP62140 327 aa3.78□□□□□ -1.8
SNCA-213ENST00000618500 C6orf136Q5SQH8 315 aa3.78□□□□□ -1.8
SNCA-213ENST00000618500 TRIML2Q8N7C3 387 aa3.78□□□□□ -1.8
SNCA-213ENST00000618500 FAM156AQ8NDB6 213 aa3.78□□□□□ -1.8
SNCA-213ENST00000618500 VPS37AQ8NEZ2 397 aa3.78□□□□□ -1.8
SNCA-213ENST00000618500 KIF18AQ8NI77 898 aa3.78□□□□□ -1.8
SNCA-213ENST00000618500 BBS10Q8TAM1 723 aa3.78□□□□□ -1.8
SNCA-213ENST00000618500 LRRC8CQ8TDW0 803 aa3.78□□□□□ -1.8
SNCA-213ENST00000618500 LIPHQ8WWY8 451 aa3.78□□□□□ -1.8
SNCA-213ENST00000618500 C22orf15Q8WYQ4 148 aa3.78□□□□□ -1.8
SNCA-213ENST00000618500 CCL17Q92583 94 aa3.78□□□□□ -1.8
SNCA-213ENST00000618500 TAAR8Q969N4 342 aa3.78□□□□□ -1.8
SNCA-213ENST00000618500 NABP1Q96AH0 204 aa3.78□□□□□ -1.8
SNCA-213ENST00000618500 HAVCR1Q96D42 359 aa3.78□□□□□ -1.8
SNCA-213ENST00000618500 CHMP6Q96FZ7 201 aa3.78□□□□□ -1.8
SNCA-213ENST00000618500 SLC25A44Q96H78 314 aaPredicted RBP3.78□□□□□ -1.8
SNCA-213ENST00000618500 TSPAN32Q96QS1 320 aa3.78□□□□□ -1.8
SNCA-213ENST00000618500 MRPL13Q9BYD1 178 aaKnown RBP3.78□□□□□ -1.8
SNCA-213ENST00000618500 DPY30Q9C005 99 aa3.78□□□□□ -1.8
SNCA-213ENST00000618500 WNT10AQ9GZT5 417 aa3.78□□□□□ -1.8
SNCA-213ENST00000618500 MEGF9Q9H1U4 602 aa3.78□□□□□ -1.8
SNCA-213ENST00000618500 DPH5Q9H2P9 285 aa3.78□□□□□ -1.8
SNCA-213ENST00000618500 MARCH7Q9H992 704 aa3.78□□□□□ -1.8
SNCA-213ENST00000618500 SIAEQ9HAT2 523 aa3.78□□□□□ -1.8
SNCA-213ENST00000618500 ZNF229Q9UJW7 825 aa3.78□□□□□ -1.8
SNCA-213ENST00000618500 UGT2A1Q9Y4X1 527 aa3.78□□□□□ -1.8
SNCA-213ENST00000618500 U3KQK5 164 aa3.78□□□□□ -1.8
SNCA-213ENST00000618500 BTBD17A6NE02 478 aa3.78□□□□□ -1.8
SNCA-213ENST00000618500 ZNF726A6NNF4 738 aa3.78□□□□□ -1.8
SNCA-213ENST00000618500 KRT75O95678 551 aa3.78□□□□□ -1.8
SNCA-213ENST00000618500 LCKP06239 509 aa3.78□□□□□ -1.8
SNCA-213ENST00000618500 FBP1P09467 338 aa3.78□□□□□ -1.8
SNCA-213ENST00000618500 SLC6A2P23975 617 aa3.78□□□□□ -1.8
SNCA-213ENST00000618500 STOMP27105 288 aa3.78□□□□□ -1.8
SNCA-213ENST00000618500 PCGF2P35227 344 aa3.78□□□□□ -1.8
SNCA-213ENST00000618500 SOAT1P35610 550 aa3.78□□□□□ -1.8
SNCA-213ENST00000618500 RGS6P49758 472 aa3.78□□□□□ -1.8
SNCA-213ENST00000618500 PLTPP55058 493 aa3.78□□□□□ -1.8
SNCA-213ENST00000618500 PCBD1P61457 104 aa3.78□□□□□ -1.8
SNCA-213ENST00000618500 C2orf54Q08AI8 447 aa3.78□□□□□ -1.8
SNCA-213ENST00000618500 GPAT3Q53EU6 434 aa3.78□□□□□ -1.8
SNCA-213ENST00000618500 C11orf87Q6NUJ2 197 aa3.78□□□□□ -1.8
SNCA-213ENST00000618500 ULK3Q6PHR2 472 aa3.78□□□□□ -1.8
SNCA-213ENST00000618500 FBXW12Q6X9E4 464 aa3.78□□□□□ -1.8
SNCA-213ENST00000618500 ANKFN1Q8N957 763 aa3.78□□□□□ -1.8
SNCA-213ENST00000618500 NOA1Q8NC60 698 aaKnown RBP3.78□□□□□ -1.8
SNCA-213ENST00000618500 NOXO1Q8NFA2 376 aa3.78□□□□□ -1.8
SNCA-213ENST00000618500 OR4C13Q8NGP0 309 aa3.78□□□□□ -1.8
SNCA-213ENST00000618500 OR52P1PQ8NH57 321 aa3.78□□□□□ -1.8
SNCA-213ENST00000618500 FGFBP3Q8TAT2 258 aa3.78□□□□□ -1.8
SNCA-213ENST00000618500 AJUBAQ96IF1 538 aa3.78□□□□□ -1.8
SNCA-213ENST00000618500 POLR2J2Q9GZM3 115 aaKnown RBP3.78□□□□□ -1.8
SNCA-213ENST00000618500 POLR2J3Q9H1A7 115 aaKnown RBP3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms