RNA–Protein interactions for RNA: ENST00000615540.4

PDLIM5-222, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 6,219 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-222ENST00000615540 FITM1A5D6W6 292 aa8.09□□□□□ -1.11
PDLIM5-222ENST00000615540 M0R036 132 aa8.09□□□□□ -1.11
PDLIM5-222ENST00000615540 PEX14O75381 377 aa8.09□□□□□ -1.11
PDLIM5-222ENST00000615540 MRPL33O75394 65 aaKnown RBP8.09□□□□□ -1.11
PDLIM5-222ENST00000615540 AIMP2Q13155 320 aaKnown RBP8.09□□□□□ -1.11
PDLIM5-222ENST00000615540 ASAH1Q13510 395 aa8.09□□□□□ -1.11
PDLIM5-222ENST00000615540 GLIPR1L1Q6UWM5 242 aa8.09□□□□□ -1.11
PDLIM5-222ENST00000615540 AAED1Q7RTV5 226 aa8.09□□□□□ -1.11
PDLIM5-222ENST00000615540 SPEM1Q8N4L4 309 aa8.09□□□□□ -1.11
PDLIM5-222ENST00000615540 OR51S1Q8NGJ8 323 aa8.09□□□□□ -1.11
PDLIM5-222ENST00000615540 ZBTB8AQ96BR9 441 aa8.09□□□□□ -1.11
PDLIM5-222ENST00000615540 KCTD12Q96CX2 325 aaKnown RBP8.09□□□□□ -1.11
PDLIM5-222ENST00000615540 ZNF436Q9C0F3 470 aaPredicted RBP8.09□□□□□ -1.11
PDLIM5-222ENST00000615540 S1PR5Q9H228 398 aa8.09□□□□□ -1.11
PDLIM5-222ENST00000615540 FKRPQ9H9S5 495 aa8.09□□□□□ -1.11
PDLIM5-222ENST00000615540 PLSCR3Q9NRY6 295 aa8.09□□□□□ -1.11
PDLIM5-222ENST00000615540 GPR173Q9NS66 373 aa8.09□□□□□ -1.11
PDLIM5-222ENST00000615540 DVL2O14641 736 aa8.09□□□□□ -1.11
PDLIM5-222ENST00000615540 CCL11P51671 97 aa8.09□□□□□ -1.11
PDLIM5-222ENST00000615540 NXPH1P58417 271 aa8.09□□□□□ -1.11
PDLIM5-222ENST00000615540 FAM189A2Q15884 450 aa8.09□□□□□ -1.11
PDLIM5-222ENST00000615540 FIP1L1Q6UN15 594 aaKnown RBP8.09□□□□□ -1.11
PDLIM5-222ENST00000615540 ARSKQ6UWY0 536 aa8.09□□□□□ -1.11
PDLIM5-222ENST00000615540 ABI3BPQ7Z7G0 1075 aa8.09□□□□□ -1.11
PDLIM5-222ENST00000615540 KIAA1958Q8N8K9 716 aa8.09□□□□□ -1.11
PDLIM5-222ENST00000615540 OR10G3Q8NGC4 313 aa8.09□□□□□ -1.11
PDLIM5-222ENST00000615540 OR56B4Q8NH76 319 aa8.09□□□□□ -1.11
PDLIM5-222ENST00000615540 RADILQ96JH8 1075 aa8.09□□□□□ -1.11
PDLIM5-222ENST00000615540 ACAD8Q9UKU7 415 aa8.09□□□□□ -1.11
PDLIM5-222ENST00000615540 MEGF11A6BM72 1044 aa8.09□□□□□ -1.11
PDLIM5-222ENST00000615540 ZNF705EA8MWA4 302 aaPredicted RBP8.09□□□□□ -1.11
PDLIM5-222ENST00000615540 TGM1P22735 817 aa8.09□□□□□ -1.11
PDLIM5-222ENST00000615540 CDKN2AP42771 156 aaKnown RBP8.09□□□□□ -1.11
PDLIM5-222ENST00000615540 RPS18P62269 152 aaKnown RBP8.09□□□□□ -1.11
PDLIM5-222ENST00000615540 IL13RA1P78552 427 aa8.09□□□□□ -1.11
PDLIM5-222ENST00000615540 PSG6Q00889 435 aa8.09□□□□□ -1.11
PDLIM5-222ENST00000615540 TMEM201Q5SNT2 666 aa8.09□□□□□ -1.11
PDLIM5-222ENST00000615540 ELP2Q6IA86 826 aa8.09□□□□□ -1.11
PDLIM5-222ENST00000615540 OR52B4Q8NGK2 314 aa8.09□□□□□ -1.11
PDLIM5-222ENST00000615540 ZPLD1Q8TCW7 415 aa8.09□□□□□ -1.11
PDLIM5-222ENST00000615540 C10orf90Q96M02 699 aa8.09□□□□□ -1.11
PDLIM5-222ENST00000615540 DCBLD2Q96PD2 775 aa8.09□□□□□ -1.11
PDLIM5-222ENST00000615540 LOXL2Q9Y4K0 774 aa8.09□□□□□ -1.11
PDLIM5-222ENST00000615540 B4DXG7 233 aa8.09□□□□□ -1.11
PDLIM5-222ENST00000615540 LIMS3P0CW19 117 aa8.09□□□□□ -1.11
PDLIM5-222ENST00000615540 LIMS4P0CW20 117 aa8.09□□□□□ -1.11
PDLIM5-222ENST00000615540 Q6ZTK2 550 aa8.09□□□□□ -1.11
PDLIM5-222ENST00000615540 ARIH2OSQ8N7S6 290 aa8.09□□□□□ -1.11
PDLIM5-222ENST00000615540 MAFIPQ8WZ33 124 aa8.09□□□□□ -1.11
PDLIM5-222ENST00000615540 FOXRED1Q96CU9 486 aaPredicted RBP8.09□□□□□ -1.11
PDLIM5-222ENST00000615540 UTP23Q9BRU9 249 aaKnown RBP8.09□□□□□ -1.11
PDLIM5-222ENST00000615540 OCIAD1Q9NX40 245 aa8.09□□□□□ -1.11
PDLIM5-222ENST00000615540 MCTS1Q9ULC4 181 aaKnown RBP8.09□□□□□ -1.11
PDLIM5-222ENST00000615540 SLC5A6Q9Y289 635 aa8.09□□□□□ -1.11
PDLIM5-222ENST00000615540 TP53P04637 393 aaPredicted RBP8.08□□□□□ -1.12
PDLIM5-222ENST00000615540 MTCP1P56278 107 aa8.08□□□□□ -1.12
PDLIM5-222ENST00000615540 UBE2IP63279 158 aaKnown RBP8.08□□□□□ -1.12
PDLIM5-222ENST00000615540 ZNF85Q03923 595 aa8.08□□□□□ -1.12
PDLIM5-222ENST00000615540 PPA1Q15181 289 aa8.08□□□□□ -1.12
PDLIM5-222ENST00000615540 CNN3Q15417 329 aaKnown RBP8.08□□□□□ -1.12
PDLIM5-222ENST00000615540 HACD4Q5VWC8 232 aa8.08□□□□□ -1.12
PDLIM5-222ENST00000615540 OR10K2Q6IF99 312 aa8.08□□□□□ -1.12
PDLIM5-222ENST00000615540 TMPPEQ6ZT21 453 aa8.08□□□□□ -1.12
PDLIM5-222ENST00000615540 ELMOD2Q8IZ81 293 aa8.08□□□□□ -1.12
PDLIM5-222ENST00000615540 STOML3Q8TAV4 291 aa8.08□□□□□ -1.12
PDLIM5-222ENST00000615540 ROBO4Q8WZ75 1007 aa8.08□□□□□ -1.12
PDLIM5-222ENST00000615540 OR2M2Q96R28 347 aa8.08□□□□□ -1.12
PDLIM5-222ENST00000615540 ZNF700Q9H0M5 742 aa8.08□□□□□ -1.12
PDLIM5-222ENST00000615540 ASH2LQ9UBL3 628 aa8.08□□□□□ -1.12
PDLIM5-222ENST00000615540 COPS3Q9UNS2 423 aa8.08□□□□□ -1.12
PDLIM5-222ENST00000615540 HRH3Q9Y5N1 445 aa8.08□□□□□ -1.12
PDLIM5-222ENST00000615540 H7C417 338 aa8.08□□□□□ -1.12
PDLIM5-222ENST00000615540 KIR2DL3P43628 341 aa8.08□□□□□ -1.12
PDLIM5-222ENST00000615540 EVX1P49640 407 aa8.08□□□□□ -1.12
PDLIM5-222ENST00000615540 MRPL49Q13405 166 aaKnown RBP8.08□□□□□ -1.12
PDLIM5-222ENST00000615540 ADGRE4PQ86SQ3 457 aa8.08□□□□□ -1.12
PDLIM5-222ENST00000615540 ZNF454Q8N9F8 522 aa8.08□□□□□ -1.12
PDLIM5-222ENST00000615540 PTDSS2Q9BVG9 487 aa8.08□□□□□ -1.12
PDLIM5-222ENST00000615540 RABL2AQ9UBK7 228 aaPredicted RBP8.08□□□□□ -1.12
PDLIM5-222ENST00000615540 KCNN3Q9UGI6 736 aa8.08□□□□□ -1.12
PDLIM5-222ENST00000615540 FBXL2Q9UKC9 423 aa8.08□□□□□ -1.12
PDLIM5-222ENST00000615540 RABL2BQ9UNT1 228 aa8.08□□□□□ -1.12
PDLIM5-222ENST00000615540 ANKRD36A6QL64 1941 aa8.08□□□□□ -1.12
PDLIM5-222ENST00000615540 IGHV3-64DA0A0J9YX35 117 aa8.08□□□□□ -1.12
PDLIM5-222ENST00000615540 TMEM82A0PJX8 343 aa8.08□□□□□ -1.12
PDLIM5-222ENST00000615540 NPIPB8E9PQR5 432 aa8.08□□□□□ -1.12
PDLIM5-222ENST00000615540 ZNF93P35789 620 aaPredicted RBP8.08□□□□□ -1.12
PDLIM5-222ENST00000615540 EMP3P54852 163 aa8.08□□□□□ -1.12
PDLIM5-222ENST00000615540 GAB4Q2WGN9 574 aa8.08□□□□□ -1.12
PDLIM5-222ENST00000615540 EXOSC6Q5RKV6 272 aaKnown RBP8.08□□□□□ -1.12
PDLIM5-222ENST00000615540 CCDC28AQ8IWP9 274 aa8.08□□□□□ -1.12
PDLIM5-222ENST00000615540 MAFAQ8NHW3 353 aaPredicted RBP8.08□□□□□ -1.12
PDLIM5-222ENST00000615540 NINJ1Q92982 152 aa8.08□□□□□ -1.12
PDLIM5-222ENST00000615540 C7orf50Q9BRJ6 194 aaKnown RBP8.08□□□□□ -1.12
PDLIM5-222ENST00000615540 DEFB127Q9H1M4 99 aa8.08□□□□□ -1.12
PDLIM5-222ENST00000615540 UBE2J1Q9Y385 318 aaPredicted RBP8.08□□□□□ -1.12
PDLIM5-222ENST00000615540 MYO10Q9HD67 2058 aa8.08□□□□□ -1.12
PDLIM5-222ENST00000615540 BHLHE40O14503 412 aa8.08□□□□□ -1.12
PDLIM5-222ENST00000615540 IMPA2O14732 288 aa8.08□□□□□ -1.12
PDLIM5-222ENST00000615540 HOXB5P09067 269 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms