RNA–Protein interactions for RNA: ENST00000613099.4

VPS13D-213, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13D, Length 16,245 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-213ENST00000613099 IL10RBQ08334 325 aa4.57□□□□□ -1.68
VPS13D-213ENST00000613099 ELAVL1Q15717 326 aaKnown RBP4.57□□□□□ -1.68
VPS13D-213ENST00000613099 CITED1Q99966 193 aa4.57□□□□□ -1.68
VPS13D-213ENST00000613099 CPPED1Q9BRF8 314 aaPredicted RBP4.57□□□□□ -1.68
VPS13D-213ENST00000613099 ZCCHC3Q9NUD5 404 aaKnown RBP4.57□□□□□ -1.68
VPS13D-213ENST00000613099 M0R082 166 aa4.57□□□□□ -1.68
VPS13D-213ENST00000613099 KLK1P06870 262 aa4.57□□□□□ -1.68
VPS13D-213ENST00000613099 ACHEP22303 614 aa4.57□□□□□ -1.68
VPS13D-213ENST00000613099 KLRK1P26718 216 aa4.57□□□□□ -1.68
VPS13D-213ENST00000613099 SSR2P43308 183 aa4.57□□□□□ -1.68
VPS13D-213ENST00000613099 NIT1Q86X76 327 aa4.57□□□□□ -1.68
VPS13D-213ENST00000613099 PRSS58Q8IYP2 241 aa4.57□□□□□ -1.68
VPS13D-213ENST00000613099 OR5AR1Q8NGP9 310 aa4.57□□□□□ -1.68
VPS13D-213ENST00000613099 OR2T10Q8NGZ9 312 aa4.57□□□□□ -1.68
VPS13D-213ENST00000613099 STARD4Q96DR4 205 aa4.57□□□□□ -1.68
VPS13D-213ENST00000613099 FBXO17Q96EF6 278 aa4.57□□□□□ -1.68
VPS13D-213ENST00000613099 ANKRD20A5PA0PJZ0 165 aa4.56□□□□□ -1.68
VPS13D-213ENST00000613099 DVL2O14641 736 aa4.56□□□□□ -1.68
VPS13D-213ENST00000613099 TP53I11O14683 189 aa4.56□□□□□ -1.68
VPS13D-213ENST00000613099 GREM1O60565 184 aa4.56□□□□□ -1.68
VPS13D-213ENST00000613099 VNN1O95497 513 aa4.56□□□□□ -1.68
VPS13D-213ENST00000613099 TTRP02766 147 aa4.56□□□□□ -1.68
VPS13D-213ENST00000613099 OR5M10Q6IEU7 315 aa4.56□□□□□ -1.68
VPS13D-213ENST00000613099 PRSS35Q8N3Z0 413 aa4.56□□□□□ -1.68
VPS13D-213ENST00000613099 OR4K15Q8NH41 348 aa4.56□□□□□ -1.68
VPS13D-213ENST00000613099 ARRDC2Q8TBH0 407 aa4.56□□□□□ -1.68
VPS13D-213ENST00000613099 BCL2L2Q92843 193 aaPredicted RBP4.56□□□□□ -1.68
VPS13D-213ENST00000613099 SMIM7Q9BQ49 75 aa4.56□□□□□ -1.68
VPS13D-213ENST00000613099 SUSD5O60279 629 aa4.56□□□□□ -1.68
VPS13D-213ENST00000613099 ITGB2P05107 769 aa4.56□□□□□ -1.68
VPS13D-213ENST00000613099 YBEYP58557 167 aaPredicted RBP4.56□□□□□ -1.68
VPS13D-213ENST00000613099 PODNL1Q6PEZ8 512 aa4.56□□□□□ -1.68
VPS13D-213ENST00000613099 OR4N2Q8NGD1 307 aa4.56□□□□□ -1.68
VPS13D-213ENST00000613099 ZBTB45Q96K62 511 aaPredicted RBP4.56□□□□□ -1.68
VPS13D-213ENST00000613099 IP6K3Q96PC2 410 aa4.56□□□□□ -1.68
VPS13D-213ENST00000613099 ZNF701Q9NV72 531 aaPredicted RBP4.56□□□□□ -1.68
VPS13D-213ENST00000613099 AUP1Q9Y679 476 aa4.56□□□□□ -1.68
VPS13D-213ENST00000613099 DSCR3O14972 297 aa4.56□□□□□ -1.68
VPS13D-213ENST00000613099 LAMP1P11279 417 aa4.56□□□□□ -1.68
VPS13D-213ENST00000613099 FCGR2CP31995 323 aa4.56□□□□□ -1.68
VPS13D-213ENST00000613099 ZNF695Q8IW36 515 aa4.56□□□□□ -1.68
VPS13D-213ENST00000613099 TBX15Q96SF7 602 aa4.56□□□□□ -1.68
VPS13D-213ENST00000613099 C1orf198Q9H425 327 aa4.56□□□□□ -1.68
VPS13D-213ENST00000613099 RIMS4Q9H426 269 aaPredicted RBP4.56□□□□□ -1.68
VPS13D-213ENST00000613099 XRCC3O43542 346 aa4.56□□□□□ -1.68
VPS13D-213ENST00000613099 CXCL3P19876 107 aa4.56□□□□□ -1.68
VPS13D-213ENST00000613099 TCL1AP56279 114 aa4.56□□□□□ -1.68
VPS13D-213ENST00000613099 HBA1P69905 142 aa4.56□□□□□ -1.68
VPS13D-213ENST00000613099 METTL7BQ6UX53 244 aa4.56□□□□□ -1.68
VPS13D-213ENST00000613099 DPPA3Q6W0C5 159 aa4.56□□□□□ -1.68
VPS13D-213ENST00000613099 C6orf120Q7Z4R8 191 aa4.56□□□□□ -1.68
VPS13D-213ENST00000613099 VRK2Q86Y07 508 aa4.56□□□□□ -1.68
VPS13D-213ENST00000613099 PTOV1Q86YD1 416 aa4.56□□□□□ -1.68
VPS13D-213ENST00000613099 GRHL3Q8TE85 626 aa4.56□□□□□ -1.68
VPS13D-213ENST00000613099 TPPP3Q9BW30 176 aa4.56□□□□□ -1.68
VPS13D-213ENST00000613099 APOBEC3GQ9HC16 384 aaKnown RBP4.56□□□□□ -1.68
VPS13D-213ENST00000613099 TMEM150BA6NC51 233 aa4.56□□□□□ -1.68
VPS13D-213ENST00000613099 RAD51DO75771 328 aa4.56□□□□□ -1.68
VPS13D-213ENST00000613099 TCTAP57738 103 aa4.56□□□□□ -1.68
VPS13D-213ENST00000613099 HLA-DRB3P79483 266 aa4.56□□□□□ -1.68
VPS13D-213ENST00000613099 FAM110CQ1W6H9 321 aa4.56□□□□□ -1.68
VPS13D-213ENST00000613099 COX19Q49B96 90 aa4.56□□□□□ -1.68
VPS13D-213ENST00000613099 TPGS2Q68CL5 300 aa4.56□□□□□ -1.68
VPS13D-213ENST00000613099 JMJD6Q6NYC1 403 aaPredicted RBP4.56□□□□□ -1.68
VPS13D-213ENST00000613099 OR6K2Q8NGY2 324 aa4.56□□□□□ -1.68
VPS13D-213ENST00000613099 UBE2FQ969M7 185 aa4.56□□□□□ -1.68
VPS13D-213ENST00000613099 FUBP1Q96AE4 644 aaKnown RBP4.56□□□□□ -1.68
VPS13D-213ENST00000613099 C2orf50Q96LR7 162 aa4.56□□□□□ -1.68
VPS13D-213ENST00000613099 STACQ99469 402 aa4.56□□□□□ -1.68
VPS13D-213ENST00000613099 B3GAT2Q9NPZ5 323 aa4.56□□□□□ -1.68
VPS13D-213ENST00000613099 PIN4Q9Y237 131 aaKnown RBP4.56□□□□□ -1.68
VPS13D-213ENST00000613099 GPR52Q9Y2T5 361 aa4.56□□□□□ -1.68
VPS13D-213ENST00000613099 V9GYH0 126 aa4.56□□□□□ -1.68
VPS13D-213ENST00000613099 PRSS47A8MTI9 375 aa4.56□□□□□ -1.68
VPS13D-213ENST00000613099 OR5G3P0C626 314 aa4.56□□□□□ -1.68
VPS13D-213ENST00000613099 CDKN2DP55273 166 aa4.56□□□□□ -1.68
VPS13D-213ENST00000613099 HERPUD1Q15011 391 aa4.56□□□□□ -1.68
VPS13D-213ENST00000613099 SECTM1Q8WVN6 248 aa4.56□□□□□ -1.68
VPS13D-213ENST00000613099 LMF1Q96S06 567 aa4.56□□□□□ -1.68
VPS13D-213ENST00000613099 MTHFD2LQ9H903 347 aaPredicted RBP4.56□□□□□ -1.68
VPS13D-213ENST00000613099 FAM206AQ9NX38 181 aa4.56□□□□□ -1.68
VPS13D-213ENST00000613099 A0A1W2PN81 502 aa4.56□□□□□ -1.68
VPS13D-213ENST00000613099 ZNF850A8MQ14 1090 aa4.56□□□□□ -1.68
VPS13D-213ENST00000613099 MEIS2O14770 477 aa4.56□□□□□ -1.68
VPS13D-213ENST00000613099 GUSBP08236 651 aa4.56□□□□□ -1.68
VPS13D-213ENST00000613099 PIRTP0C851 137 aa4.56□□□□□ -1.68
VPS13D-213ENST00000613099 CHRNA7P36544 502 aa4.56□□□□□ -1.68
VPS13D-213ENST00000613099 CTSCP53634 463 aa4.56□□□□□ -1.68
VPS13D-213ENST00000613099 HFEQ30201 348 aa4.56□□□□□ -1.68
VPS13D-213ENST00000613099 MESTQ5EB52 335 aa4.56□□□□□ -1.68
VPS13D-213ENST00000613099 GRASPQ7Z6J2 395 aaPredicted RBP4.56□□□□□ -1.68
VPS13D-213ENST00000613099 OR10W1Q8NGF6 305 aa4.56□□□□□ -1.68
VPS13D-213ENST00000613099 THEM6Q8WUY1 208 aa4.56□□□□□ -1.68
VPS13D-213ENST00000613099 BMFQ96LC9 184 aa4.56□□□□□ -1.68
VPS13D-213ENST00000613099 C1QTNF2Q9BXJ5 285 aa4.56□□□□□ -1.68
VPS13D-213ENST00000613099 MASP2O00187 686 aa4.56□□□□□ -1.68
VPS13D-213ENST00000613099 INSIG1O15503 277 aa4.56□□□□□ -1.68
VPS13D-213ENST00000613099 SOD1P00441 154 aa4.56□□□□□ -1.68
VPS13D-213ENST00000613099 BCHEP06276 602 aa4.56□□□□□ -1.68
VPS13D-213ENST00000613099 MRPL3P09001 348 aaKnown RBP4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms