RNA–Protein interactions for RNA: ENST00000612273.1

COL6A1-207, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL6A1, Length 3,251 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-207ENST00000612273 ELFN2Q5R3F8 820 aa12.68□□□□□ -0.38
COL6A1-207ENST00000612273 ARSKQ6UWY0 536 aa12.68□□□□□ -0.38
COL6A1-207ENST00000612273 SEZ6L2Q6UXD5 910 aa12.68□□□□□ -0.38
COL6A1-207ENST00000612273 ZNF546Q86UE3 836 aa12.68□□□□□ -0.38
COL6A1-207ENST00000612273 GPBAR1Q8TDU6 330 aa12.68□□□□□ -0.38
COL6A1-207ENST00000612273 WNT2BQ93097 391 aa12.68□□□□□ -0.38
COL6A1-207ENST00000612273 DCBLD2Q96PD2 775 aa12.68□□□□□ -0.38
COL6A1-207ENST00000612273 EMC6Q9BV81 110 aa12.68□□□□□ -0.38
COL6A1-207ENST00000612273 PCDH15Q96QU1 1955 aa12.67□□□□□ -0.38
COL6A1-207ENST00000612273 TEX51A0A1B0GUA7 166 aa12.67□□□□□ -0.38
COL6A1-207ENST00000612273 IGHV4-34P06331 123 aa12.67□□□□□ -0.38
COL6A1-207ENST00000612273 ASAH2BP0C7U1 165 aa12.67□□□□□ -0.38
COL6A1-207ENST00000612273 PNMTP11086 282 aa12.67□□□□□ -0.38
COL6A1-207ENST00000612273 M6PRP20645 277 aa12.67□□□□□ -0.38
COL6A1-207ENST00000612273 DNASE1L1P49184 302 aa12.67□□□□□ -0.38
COL6A1-207ENST00000612273 NSDHLQ15738 373 aa12.67□□□□□ -0.38
COL6A1-207ENST00000612273 BEST3Q8N1M1 668 aa12.67□□□□□ -0.38
COL6A1-207ENST00000612273 PTPMT1Q8WUK0 201 aaPredicted RBP12.67□□□□□ -0.38
COL6A1-207ENST00000612273 ZNF75AQ96N20 296 aa12.67□□□□□ -0.38
COL6A1-207ENST00000612273 CD207Q9UJ71 328 aa12.67□□□□□ -0.38
COL6A1-207ENST00000612273 VDAC3Q9Y277 283 aa12.67□□□□□ -0.38
COL6A1-207ENST00000612273 MRPS18BQ9Y676 258 aaKnown RBP12.67□□□□□ -0.38
COL6A1-207ENST00000612273 TNFRSF10CO14798 259 aa12.67□□□□□ -0.38
COL6A1-207ENST00000612273 HOXD4P09016 255 aaPredicted RBP12.67□□□□□ -0.38
COL6A1-207ENST00000612273 PSMD4P55036 377 aaKnown RBP12.67□□□□□ -0.38
COL6A1-207ENST00000612273 ANKRD16Q6P6B7 361 aa12.67□□□□□ -0.38
COL6A1-207ENST00000612273 ADGRG3Q86Y34 549 aa12.67□□□□□ -0.38
COL6A1-207ENST00000612273 ZNF595Q8IYB9 648 aa12.67□□□□□ -0.38
COL6A1-207ENST00000612273 GABRG1Q8N1C3 465 aa12.67□□□□□ -0.38
COL6A1-207ENST00000612273 SLC25A28Q96A46 364 aa12.67□□□□□ -0.38
COL6A1-207ENST00000612273 LRRC61Q9BV99 259 aa12.67□□□□□ -0.38
COL6A1-207ENST00000612273 ZNF471Q9BX82 626 aaPredicted RBP12.67□□□□□ -0.38
COL6A1-207ENST00000612273 KIR2DS5A0A0G2JLQ3 304 aa12.66□□□□□ -0.38
COL6A1-207ENST00000612273 A0A0G2JNG1 304 aa12.66□□□□□ -0.38
COL6A1-207ENST00000612273 SLC22A23A1A5C7 686 aa12.66□□□□□ -0.38
COL6A1-207ENST00000612273 TMEM212A6NML5 194 aa12.66□□□□□ -0.38
COL6A1-207ENST00000612273 EEF1E1-BLOC1S5C9J1V9 151 aa12.66□□□□□ -0.38
COL6A1-207ENST00000612273 H3BML4 177 aa12.66□□□□□ -0.38
COL6A1-207ENST00000612273 KIR2DS3K7RE56 304 aa12.66□□□□□ -0.38
COL6A1-207ENST00000612273 GABRA1P14867 456 aa12.66□□□□□ -0.38
COL6A1-207ENST00000612273 GMFBP60983 142 aa12.66□□□□□ -0.38
COL6A1-207ENST00000612273 GK2Q14410 553 aaPredicted RBP12.66□□□□□ -0.38
COL6A1-207ENST00000612273 KIR2DS5Q14953 304 aa12.66□□□□□ -0.38
COL6A1-207ENST00000612273 CDNFQ49AH0 187 aa12.66□□□□□ -0.38
COL6A1-207ENST00000612273 OLFML2AQ68BL7 652 aa12.66□□□□□ -0.38
COL6A1-207ENST00000612273 ASPHD2Q6ICH7 369 aa12.66□□□□□ -0.38
COL6A1-207ENST00000612273 C3orf33Q6P1S2 294 aa12.66□□□□□ -0.38
COL6A1-207ENST00000612273 GPAT4Q86UL3 456 aa12.66□□□□□ -0.38
COL6A1-207ENST00000612273 COMMD2Q86X83 199 aa12.66□□□□□ -0.38
COL6A1-207ENST00000612273 OTOSQ8NHW6 89 aa12.66□□□□□ -0.38
COL6A1-207ENST00000612273 APMAPQ9HDC9 416 aa12.66□□□□□ -0.38
COL6A1-207ENST00000612273 TMEM82A0PJX8 343 aa12.66□□□□□ -0.38
COL6A1-207ENST00000612273 SULT1B1O43704 296 aa12.66□□□□□ -0.38
COL6A1-207ENST00000612273 SLC2A1P11166 492 aa12.66□□□□□ -0.38
COL6A1-207ENST00000612273 STARP49675 285 aa12.66□□□□□ -0.38
COL6A1-207ENST00000612273 LUMP51884 338 aaPredicted RBP12.66□□□□□ -0.38
COL6A1-207ENST00000612273 SLC36A1Q7Z2H8 476 aa12.66□□□□□ -0.38
COL6A1-207ENST00000612273 SPICQ8N5J4 248 aa12.66□□□□□ -0.38
COL6A1-207ENST00000612273 LRRC75AQ8NAA5 344 aa12.66□□□□□ -0.38
COL6A1-207ENST00000612273 STEAP2Q8NFT2 490 aa12.66□□□□□ -0.38
COL6A1-207ENST00000612273 NUDCD2Q8WVJ2 157 aa12.66□□□□□ -0.38
COL6A1-207ENST00000612273 RADILQ96JH8 1075 aa12.66□□□□□ -0.38
COL6A1-207ENST00000612273 ZNF587Q96SQ5 575 aaPredicted RBP12.66□□□□□ -0.38
COL6A1-207ENST00000612273 ABHD6Q9BV23 337 aa12.66□□□□□ -0.38
COL6A1-207ENST00000612273 PPA2Q9H2U2 334 aa12.66□□□□□ -0.38
COL6A1-207ENST00000612273 MED29Q9NX70 200 aa12.66□□□□□ -0.38
COL6A1-207ENST00000612273 MRTO4Q9UKD2 239 aaKnown RBP12.66□□□□□ -0.38
COL6A1-207ENST00000612273 TRBV5-5A0A0J9YX44 114 aa12.66□□□□□ -0.38
COL6A1-207ENST00000612273 SPTY2D1-AS1A0A0U1RR47 76 aa12.66□□□□□ -0.38
COL6A1-207ENST00000612273 C13orf42A0A1B0GVH6 325 aa12.66□□□□□ -0.38
COL6A1-207ENST00000612273 P2RY10O00398 339 aa12.66□□□□□ -0.38
COL6A1-207ENST00000612273 OR4E1P0C645 316 aa12.66□□□□□ -0.38
COL6A1-207ENST00000612273 AVPR2P30518 371 aa12.66□□□□□ -0.38
COL6A1-207ENST00000612273 ARL4DP49703 201 aa12.66□□□□□ -0.38
COL6A1-207ENST00000612273 INSM1Q01101 510 aaPredicted RBP12.66□□□□□ -0.38
COL6A1-207ENST00000612273 SLC17A1Q14916 467 aa12.66□□□□□ -0.38
COL6A1-207ENST00000612273 NR0B2Q15466 257 aa12.66□□□□□ -0.38
COL6A1-207ENST00000612273 PRTGQ2VWP7 1150 aa12.66□□□□□ -0.38
COL6A1-207ENST00000612273 RGS7BPQ6MZT1 257 aaPredicted RBP12.66□□□□□ -0.38
COL6A1-207ENST00000612273 UNQ6126/PRO20091Q6UXV3 157 aa12.66□□□□□ -0.38
COL6A1-207ENST00000612273 TMPRSS9Q7Z410 1059 aa12.66□□□□□ -0.38
COL6A1-207ENST00000612273 KCTD20Q7Z5Y7 419 aa12.66□□□□□ -0.38
COL6A1-207ENST00000612273 PDZD9Q8IXQ8 264 aa12.66□□□□□ -0.38
COL6A1-207ENST00000612273 BPIFB2Q8N4F0 458 aa12.66□□□□□ -0.38
COL6A1-207ENST00000612273 OR13C3Q8NGS6 347 aa12.66□□□□□ -0.38
COL6A1-207ENST00000612273 PHYHIPQ92561 330 aa12.66□□□□□ -0.38
COL6A1-207ENST00000612273 KLHDC7BQ96G42 594 aa12.66□□□□□ -0.38
COL6A1-207ENST00000612273 REG4Q9BYZ8 158 aa12.66□□□□□ -0.38
COL6A1-207ENST00000612273 WDR13Q9H1Z4 485 aa12.66□□□□□ -0.38
COL6A1-207ENST00000612273 PRR13Q9NZ81 148 aa12.66□□□□□ -0.38
COL6A1-207ENST00000612273 PRODH2Q9UF12 536 aa12.66□□□□□ -0.38
COL6A1-207ENST00000612273 TMEM150CB9EJG8 249 aa12.65□□□□□ -0.38
COL6A1-207ENST00000612273 ZNF254O75437 659 aa12.65□□□□□ -0.38
COL6A1-207ENST00000612273 OR2A4O95047 310 aa12.65□□□□□ -0.38
COL6A1-207ENST00000612273 CYB5AP00167 134 aa12.65□□□□□ -0.38
COL6A1-207ENST00000612273 HLA-AP01891 365 aaKnown RBP12.65□□□□□ -0.38
COL6A1-207ENST00000612273 CSF1P09603 554 aa12.65□□□□□ -0.38
COL6A1-207ENST00000612273 AKR1C4P17516 323 aa12.65□□□□□ -0.38
COL6A1-207ENST00000612273 SLC37A1P57057 533 aa12.65□□□□□ -0.38
COL6A1-207ENST00000612273 CXADRP78310 365 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms