RNA–Protein interactions for RNA: ENST00000612050.4

CBWD3-208, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,440 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-208ENST00000612050 REEP1Q9H902 201 aa10.66□□□□□ -0.7
CBWD3-208ENST00000612050 ZNF224Q9NZL3 707 aa10.66□□□□□ -0.7
CBWD3-208ENST00000612050 DUSP13Q9UII6 198 aa10.66□□□□□ -0.7
CBWD3-208ENST00000612050 NDRG4Q9ULP0 352 aaKnown RBP10.66□□□□□ -0.7
CBWD3-208ENST00000612050 SIGLEC7Q9Y286 467 aa10.66□□□□□ -0.7
CBWD3-208ENST00000612050 ADAM18Q9Y3Q7 739 aa10.66□□□□□ -0.7
CBWD3-208ENST00000612050 TIMM10BQ9Y5J6 103 aa10.66□□□□□ -0.7
CBWD3-208ENST00000612050 TEX13CA0A0J9YWL9 993 aa10.65□□□□□ -0.7
CBWD3-208ENST00000612050 LOC390937A0A1W2PQ73 354 aa10.65□□□□□ -0.7
CBWD3-208ENST00000612050 TNFRSF11BO00300 401 aa10.65□□□□□ -0.7
CBWD3-208ENST00000612050 SOCS2O14508 198 aa10.65□□□□□ -0.7
CBWD3-208ENST00000612050 KHDRBS3O75525 346 aaKnown RBP10.65□□□□□ -0.7
CBWD3-208ENST00000612050 APEHP13798 732 aaKnown RBP10.65□□□□□ -0.7
CBWD3-208ENST00000612050 ZNF32P17041 273 aa10.65□□□□□ -0.7
CBWD3-208ENST00000612050 FPR3P25089 353 aa10.65□□□□□ -0.7
CBWD3-208ENST00000612050 PCSK6P29122 969 aa10.65□□□□□ -0.7
CBWD3-208ENST00000612050 GCH1P30793 250 aa10.65□□□□□ -0.7
CBWD3-208ENST00000612050 LIMS1P48059 325 aa10.65□□□□□ -0.7
CBWD3-208ENST00000612050 CENPAP49450 140 aa10.65□□□□□ -0.7
CBWD3-208ENST00000612050 RASSF2P50749 326 aa10.65□□□□□ -0.7
CBWD3-208ENST00000612050 ARHGDIAP52565 204 aa10.65□□□□□ -0.7
CBWD3-208ENST00000612050 KLF3P57682 345 aaPredicted RBP10.65□□□□□ -0.7
CBWD3-208ENST00000612050 PABPC1L2AQ5JQF8 200 aa10.65□□□□□ -0.7
CBWD3-208ENST00000612050 LCN8Q6JVE9 175 aa10.65□□□□□ -0.7
CBWD3-208ENST00000612050 ZNF525Q8N782 197 aa10.65□□□□□ -0.7
CBWD3-208ENST00000612050 SYNPRQ8TBG9 265 aa10.65□□□□□ -0.7
CBWD3-208ENST00000612050 HTRA1Q92743 480 aa10.65□□□□□ -0.7
CBWD3-208ENST00000612050 ASB9Q96DX5 294 aa10.65□□□□□ -0.7
CBWD3-208ENST00000612050 Q96M85 177 aa10.65□□□□□ -0.7
CBWD3-208ENST00000612050 ERMAPQ96PL5 475 aaPredicted RBP10.65□□□□□ -0.7
CBWD3-208ENST00000612050 SORCS2Q96PQ0 1159 aa10.65□□□□□ -0.7
CBWD3-208ENST00000612050 GPX7Q96SL4 187 aaPredicted RBP10.65□□□□□ -0.7
CBWD3-208ENST00000612050 SMR3AQ99954 134 aa10.65□□□□□ -0.7
CBWD3-208ENST00000612050 IFT27Q9BW83 186 aa10.65□□□□□ -0.7
CBWD3-208ENST00000612050 ELOVL3Q9HB03 270 aa10.65□□□□□ -0.7
CBWD3-208ENST00000612050 NRIP3Q9NQ35 241 aa10.65□□□□□ -0.7
CBWD3-208ENST00000612050 SLCO1C1Q9NYB5 712 aa10.65□□□□□ -0.7
CBWD3-208ENST00000612050 IER3IP1Q9Y5U9 82 aa10.65□□□□□ -0.7
CBWD3-208ENST00000612050 H7C1C5 153 aa10.64□□□□□ -0.71
CBWD3-208ENST00000612050 GNGT2O14610 69 aa10.64□□□□□ -0.71
CBWD3-208ENST00000612050 IMPA2O14732 288 aa10.64□□□□□ -0.71
CBWD3-208ENST00000612050 SLC16A7O60669 478 aa10.64□□□□□ -0.71
CBWD3-208ENST00000612050 CCNB2O95067 398 aa10.64□□□□□ -0.71
CBWD3-208ENST00000612050 SEMG1P04279 462 aa10.64□□□□□ -0.71
CBWD3-208ENST00000612050 FAM157BP0CG42 384 aa10.64□□□□□ -0.71
CBWD3-208ENST00000612050 APEX1P27695 318 aaKnown RBP10.64□□□□□ -0.71
CBWD3-208ENST00000612050 LAP3P28838 519 aa10.64□□□□□ -0.71
CBWD3-208ENST00000612050 UCP2P55851 309 aa10.64□□□□□ -0.71
CBWD3-208ENST00000612050 LCN6P62502 163 aa10.64□□□□□ -0.71
CBWD3-208ENST00000612050 TSPAN31Q12999 210 aa10.64□□□□□ -0.71
CBWD3-208ENST00000612050 GK3PQ14409 553 aa10.64□□□□□ -0.71
CBWD3-208ENST00000612050 MST1LQ2TV78 715 aa10.64□□□□□ -0.71
CBWD3-208ENST00000612050 IQCCQ4KMZ1 466 aa10.64□□□□□ -0.71
CBWD3-208ENST00000612050 TMEM154Q6P9G4 183 aa10.64□□□□□ -0.71
CBWD3-208ENST00000612050 RINLQ6ZS11 566 aa10.64□□□□□ -0.71
CBWD3-208ENST00000612050 Q71RC1 249 aaPredicted RBP10.64□□□□□ -0.71
CBWD3-208ENST00000612050 GLB1L2Q8IW92 636 aa10.64□□□□□ -0.71
CBWD3-208ENST00000612050 OR1J1Q8NGS3 322 aa10.64□□□□□ -0.71
CBWD3-208ENST00000612050 CCDC124Q96CT7 223 aaKnown RBP10.64□□□□□ -0.71
CBWD3-208ENST00000612050 ZNF75AQ96N20 296 aa10.64□□□□□ -0.71
CBWD3-208ENST00000612050 SYT3Q9BQG1 590 aa10.64□□□□□ -0.71
CBWD3-208ENST00000612050 THTPAQ9BU02 230 aa10.64□□□□□ -0.71
CBWD3-208ENST00000612050 OR51B6Q9H340 312 aa10.64□□□□□ -0.71
CBWD3-208ENST00000612050 OR52D1Q9H346 318 aa10.64□□□□□ -0.71
CBWD3-208ENST00000612050 YY1AP1Q9H869 796 aa10.64□□□□□ -0.71
CBWD3-208ENST00000612050 REV1Q9UBZ9 1251 aa10.64□□□□□ -0.71
CBWD3-208ENST00000612050 UGT2A1Q9Y4X1 527 aa10.64□□□□□ -0.71
CBWD3-208ENST00000612050 PLCE1Q9P212 2302 aa10.63□□□□□ -0.71
CBWD3-208ENST00000612050 PLSCR5A0PG75 271 aa10.63□□□□□ -0.71
CBWD3-208ENST00000612050 C5orf49A4QMS7 147 aa10.63□□□□□ -0.71
CBWD3-208ENST00000612050 TLX2O43763 284 aaPredicted RBP10.63□□□□□ -0.71
CBWD3-208ENST00000612050 IDH3BO43837 385 aa10.63□□□□□ -0.71
CBWD3-208ENST00000612050 PTP4A3O75365 173 aa10.63□□□□□ -0.71
CBWD3-208ENST00000612050 ADRA2AP08913 450 aa10.63□□□□□ -0.71
CBWD3-208ENST00000612050 MMP7P09237 267 aaPredicted RBP10.63□□□□□ -0.71
CBWD3-208ENST00000612050 DAOP14920 347 aa10.63□□□□□ -0.71
CBWD3-208ENST00000612050 TRAP1Q12931 704 aaKnown RBP10.63□□□□□ -0.71
CBWD3-208ENST00000612050 AQP6Q13520 282 aa10.63□□□□□ -0.71
CBWD3-208ENST00000612050 SEC23BQ15437 767 aa10.63□□□□□ -0.71
CBWD3-208ENST00000612050 RFX4Q33E94 735 aa10.63□□□□□ -0.71
CBWD3-208ENST00000612050 ZNF718Q3SXZ3 478 aa10.63□□□□□ -0.71
CBWD3-208ENST00000612050 MESTQ5EB52 335 aa10.63□□□□□ -0.71
CBWD3-208ENST00000612050 C1orf94Q6P1W5 598 aa10.63□□□□□ -0.71
CBWD3-208ENST00000612050 FAM122BQ7Z309 247 aa10.63□□□□□ -0.71
CBWD3-208ENST00000612050 TSEN54Q7Z6J9 526 aaKnown RBP10.63□□□□□ -0.71
CBWD3-208ENST00000612050 ZNF584Q8IVC4 421 aa10.63□□□□□ -0.71
CBWD3-208ENST00000612050 OR10H5Q8NGA6 315 aa10.63□□□□□ -0.71
CBWD3-208ENST00000612050 FGFBP3Q8TAT2 258 aa10.63□□□□□ -0.71
CBWD3-208ENST00000612050 NABP1Q96AH0 204 aa10.63□□□□□ -0.71
CBWD3-208ENST00000612050 RASD2Q96D21 266 aa10.63□□□□□ -0.71
CBWD3-208ENST00000612050 NMD3Q96D46 503 aaKnown RBP10.63□□□□□ -0.71
CBWD3-208ENST00000612050 COG8Q96MW5 612 aa10.63□□□□□ -0.71
CBWD3-208ENST00000612050 DOK1Q99704 481 aa10.63□□□□□ -0.71
CBWD3-208ENST00000612050 MRPL37Q9BZE1 423 aaKnown RBP10.63□□□□□ -0.71
CBWD3-208ENST00000612050 OR2H1Q9GZK4 316 aa10.63□□□□□ -0.71
CBWD3-208ENST00000612050 SYT4Q9H2B2 425 aa10.63□□□□□ -0.71
CBWD3-208ENST00000612050 POLE4Q9NR33 117 aa10.63□□□□□ -0.71
CBWD3-208ENST00000612050 IL20RAQ9UHF4 553 aa10.63□□□□□ -0.71
CBWD3-208ENST00000612050 SAMHD1Q9Y3Z3 626 aaKnown RBP10.63□□□□□ -0.71
CBWD3-208ENST00000612050 ALPK2Q86TB3 2170 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms