RNA–Protein interactions for RNA: ENST00000609587.1

SMCHD1-213, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

Gene SMCHD1, Length 460 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-213ENST00000609587 SKP1P63208 163 aa2.87□□□□□ -1.95
SMCHD1-213ENST00000609587 CDK16Q00536 496 aa2.87□□□□□ -1.95
SMCHD1-213ENST00000609587 CASP8Q14790 479 aa2.87□□□□□ -1.95
SMCHD1-213ENST00000609587 PON2Q15165 354 aa2.87□□□□□ -1.95
SMCHD1-213ENST00000609587 ATP6AP1Q15904 470 aa2.87□□□□□ -1.95
SMCHD1-213ENST00000609587 MOGQ16653 247 aa2.87□□□□□ -1.95
SMCHD1-213ENST00000609587 TMEM31Q5JXX7 168 aa2.87□□□□□ -1.95
SMCHD1-213ENST00000609587 CDKL4Q5MAI5 379 aa2.87□□□□□ -1.95
SMCHD1-213ENST00000609587 MFSD14CQ5VZR4 134 aa2.87□□□□□ -1.95
SMCHD1-213ENST00000609587 TWF2Q6IBS0 349 aaKnown RBP2.87□□□□□ -1.95
SMCHD1-213ENST00000609587 ASCL4Q6XD76 172 aa2.87□□□□□ -1.95
SMCHD1-213ENST00000609587 RFLNAQ6ZTI6 216 aa2.87□□□□□ -1.95
SMCHD1-213ENST00000609587 EIF3MQ7L2H7 374 aaKnown RBP2.87□□□□□ -1.95
SMCHD1-213ENST00000609587 TRIM69Q86WT6 500 aa2.87□□□□□ -1.95
SMCHD1-213ENST00000609587 MICU2Q8IYU8 434 aa2.87□□□□□ -1.95
SMCHD1-213ENST00000609587 LIX1Q8N485 282 aa2.87□□□□□ -1.95
SMCHD1-213ENST00000609587 C17orf78Q8N4C9 275 aa2.87□□□□□ -1.95
SMCHD1-213ENST00000609587 ACOT4Q8N9L9 421 aa2.87□□□□□ -1.95
SMCHD1-213ENST00000609587 FAM83FQ8NEG4 500 aaPredicted RBP2.87□□□□□ -1.95
SMCHD1-213ENST00000609587 MARCH1Q8TCQ1 289 aa2.87□□□□□ -1.95
SMCHD1-213ENST00000609587 ELMO1Q92556 727 aa2.87□□□□□ -1.95
SMCHD1-213ENST00000609587 ARPC1AQ92747 370 aa2.87□□□□□ -1.95
SMCHD1-213ENST00000609587 RDH5Q92781 318 aa2.87□□□□□ -1.95
SMCHD1-213ENST00000609587 MYDGFQ969H8 173 aa2.87□□□□□ -1.95
SMCHD1-213ENST00000609587 SNF8Q96H20 258 aa2.87□□□□□ -1.95
SMCHD1-213ENST00000609587 ITCHQ96J02 903 aa2.87□□□□□ -1.95
SMCHD1-213ENST00000609587 NRTNQ99748 197 aa2.87□□□□□ -1.95
SMCHD1-213ENST00000609587 RASL11BQ9BPW5 248 aa2.87□□□□□ -1.95
SMCHD1-213ENST00000609587 ROGDIQ9GZN7 287 aa2.87□□□□□ -1.95
SMCHD1-213ENST00000609587 DERL2Q9GZP9 239 aa2.87□□□□□ -1.95
SMCHD1-213ENST00000609587 MFFQ9GZY8 342 aa2.87□□□□□ -1.95
SMCHD1-213ENST00000609587 GAL3ST2Q9H3Q3 398 aa2.87□□□□□ -1.95
SMCHD1-213ENST00000609587 NXF3Q9H4D5 531 aaKnown RBP2.87□□□□□ -1.95
SMCHD1-213ENST00000609587 RANBP3Q9H6Z4 567 aaPredicted RBP2.87□□□□□ -1.95
SMCHD1-213ENST00000609587 LYRM4Q9HD34 91 aa2.87□□□□□ -1.95
SMCHD1-213ENST00000609587 NT5MQ9NPB1 228 aa2.87□□□□□ -1.95
SMCHD1-213ENST00000609587 DMAP1Q9NPF5 467 aaPredicted RBP2.87□□□□□ -1.95
SMCHD1-213ENST00000609587 TREX1Q9NSU2 369 aa2.87□□□□□ -1.95
SMCHD1-213ENST00000609587 MS4A12Q9NXJ0 267 aa2.87□□□□□ -1.95
SMCHD1-213ENST00000609587 KCNIP1Q9NZI2 227 aa2.87□□□□□ -1.95
SMCHD1-213ENST00000609587 SLC7A8Q9UHI5 535 aa2.87□□□□□ -1.95
SMCHD1-213ENST00000609587 VANGL2Q9ULK5 521 aa2.87□□□□□ -1.95
SMCHD1-213ENST00000609587 ATP10AO60312 1499 aa2.87□□□□□ -1.95
SMCHD1-213ENST00000609587 GOLGA8QA0A0J9YX86 632 aa2.86□□□□□ -1.95
SMCHD1-213ENST00000609587 A0A1B0GVL5 298 aa2.86□□□□□ -1.95
SMCHD1-213ENST00000609587 TRPC5OSA6NMA1 111 aa2.86□□□□□ -1.95
SMCHD1-213ENST00000609587 GOLGA8RI6L899 631 aa2.86□□□□□ -1.95
SMCHD1-213ENST00000609587 RTL8CO15255 209 aa2.86□□□□□ -1.95
SMCHD1-213ENST00000609587 TRAF3IP2O43734 574 aaPredicted RBP2.86□□□□□ -1.95
SMCHD1-213ENST00000609587 FAM189A1O60320 539 aa2.86□□□□□ -1.95
SMCHD1-213ENST00000609587 CCNB2O95067 398 aa2.86□□□□□ -1.95
SMCHD1-213ENST00000609587 LCA5LO95447 670 aa2.86□□□□□ -1.95
SMCHD1-213ENST00000609587 NSA2O95478 260 aaKnown RBP2.86□□□□□ -1.95
SMCHD1-213ENST00000609587 TSPAN12O95859 305 aa2.86□□□□□ -1.95
SMCHD1-213ENST00000609587 CST1P01037 141 aa2.86□□□□□ -1.95
SMCHD1-213ENST00000609587 INSP01308 110 aa2.86□□□□□ -1.95
SMCHD1-213ENST00000609587 MBP02144 154 aa2.86□□□□□ -1.95
SMCHD1-213ENST00000609587 IGHV4-34P06331 123 aa2.86□□□□□ -1.95
SMCHD1-213ENST00000609587 CHTF8P0CG12 524 aa2.86□□□□□ -1.95
SMCHD1-213ENST00000609587 ICAM2P13598 275 aa2.86□□□□□ -1.95
SMCHD1-213ENST00000609587 NQO2P16083 231 aa2.86□□□□□ -1.95
SMCHD1-213ENST00000609587 ABOP16442 354 aa2.86□□□□□ -1.95
SMCHD1-213ENST00000609587 CNR1P21554 472 aa2.86□□□□□ -1.95
SMCHD1-213ENST00000609587 FMO3P31513 532 aa2.86□□□□□ -1.95
SMCHD1-213ENST00000609587 NUDT1P36639 197 aa2.86□□□□□ -1.95
SMCHD1-213ENST00000609587 OPRD1P41143 372 aa2.86□□□□□ -1.95
SMCHD1-213ENST00000609587 BCAP31P51572 246 aa2.86□□□□□ -1.95
SMCHD1-213ENST00000609587 OGDHQ02218 1023 aa2.86□□□□□ -1.95
SMCHD1-213ENST00000609587 PAX5Q02548 391 aa2.86□□□□□ -1.95
SMCHD1-213ENST00000609587 CDH17Q12864 832 aa2.86□□□□□ -1.95
SMCHD1-213ENST00000609587 ILKQ13418 452 aa2.86□□□□□ -1.95
SMCHD1-213ENST00000609587 ART3Q13508 389 aa2.86□□□□□ -1.95
SMCHD1-213ENST00000609587 ITIH4Q14624 930 aa2.86□□□□□ -1.95
SMCHD1-213ENST00000609587 SGCAQ16586 387 aa2.86□□□□□ -1.95
SMCHD1-213ENST00000609587 C6orf226Q5I0X4 101 aa2.86□□□□□ -1.95
SMCHD1-213ENST00000609587 GPR157Q5UAW9 335 aa2.86□□□□□ -1.95
SMCHD1-213ENST00000609587 ABHD12BQ7Z5M8 362 aaPredicted RBP2.86□□□□□ -1.95
SMCHD1-213ENST00000609587 RALGPS2Q86X27 583 aaPredicted RBP2.86□□□□□ -1.95
SMCHD1-213ENST00000609587 NUDCD3Q8IVD9 361 aa2.86□□□□□ -1.95
SMCHD1-213ENST00000609587 MFSD6LQ8IWD5 586 aa2.86□□□□□ -1.95
SMCHD1-213ENST00000609587 LRRC8AQ8IWT6 810 aa2.86□□□□□ -1.95
SMCHD1-213ENST00000609587 SELENOHQ8IZQ5 122 aaKnown RBP2.86□□□□□ -1.95
SMCHD1-213ENST00000609587 TTLQ8NG68 377 aa2.86□□□□□ -1.95
SMCHD1-213ENST00000609587 OR1L4Q8NGR5 311 aa2.86□□□□□ -1.95
SMCHD1-213ENST00000609587 OR13C9Q8NGT0 318 aa2.86□□□□□ -1.95
SMCHD1-213ENST00000609587 FAM81AQ8TBF8 368 aa2.86□□□□□ -1.95
SMCHD1-213ENST00000609587 LRRC20Q8TCA0 184 aa2.86□□□□□ -1.95
SMCHD1-213ENST00000609587 OPTNQ96CV9 577 aa2.86□□□□□ -1.95
SMCHD1-213ENST00000609587 ASB9Q96DX5 294 aa2.86□□□□□ -1.95
SMCHD1-213ENST00000609587 DUS3LQ96G46 650 aaKnown RBP2.86□□□□□ -1.95
SMCHD1-213ENST00000609587 PLEKHA8Q96JA3 519 aa2.86□□□□□ -1.95
SMCHD1-213ENST00000609587 ZNF641Q96N77 438 aaPredicted RBP2.86□□□□□ -1.95
SMCHD1-213ENST00000609587 HES7Q9BYE0 225 aa2.86□□□□□ -1.95
SMCHD1-213ENST00000609587 UPF3BQ9BZI7 483 aaKnown RBP2.86□□□□□ -1.95
SMCHD1-213ENST00000609587 OR2AG1Q9H205 316 aa2.86□□□□□ -1.95
SMCHD1-213ENST00000609587 RBAKQ9NYW8 714 aaPredicted RBP2.86□□□□□ -1.95
SMCHD1-213ENST00000609587 MTCH1Q9NZJ7 389 aa2.86□□□□□ -1.95
SMCHD1-213ENST00000609587 ADA2Q9NZK5 511 aa2.86□□□□□ -1.95
SMCHD1-213ENST00000609587 NAGKQ9UJ70 344 aa2.86□□□□□ -1.95
SMCHD1-213ENST00000609587 ZNF229Q9UJW7 825 aa2.86□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms