RNA–Protein interactions for RNA: ENST00000601341.5

VRK3-223, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene VRK3, Length 1,777 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-223ENST00000601341 HOXD11P31277 338 aaPredicted RBP10.47□□□□□ -0.73
VRK3-223ENST00000601341 TNFSF10P50591 281 aa10.47□□□□□ -0.73
VRK3-223ENST00000601341 FOXK1P85037 733 aa10.47□□□□□ -0.73
VRK3-223ENST00000601341 LTBQ06643 244 aa10.47□□□□□ -0.73
VRK3-223ENST00000601341 YIF1BQ5BJH7 314 aa10.47□□□□□ -0.73
VRK3-223ENST00000601341 ZNF766Q5HY98 468 aa10.47□□□□□ -0.73
VRK3-223ENST00000601341 RAET1LQ5VY80 246 aa10.47□□□□□ -0.73
VRK3-223ENST00000601341 ZNF57Q68EA5 555 aaPredicted RBP10.47□□□□□ -0.73
VRK3-223ENST00000601341 GALNTL5Q7Z4T8 443 aa10.47□□□□□ -0.73
VRK3-223ENST00000601341 OR5M1Q8NGP8 315 aa10.47□□□□□ -0.73
VRK3-223ENST00000601341 OR5J2Q8NH18 312 aa10.47□□□□□ -0.73
VRK3-223ENST00000601341 UBASH3BQ8TF42 649 aa10.47□□□□□ -0.73
VRK3-223ENST00000601341 SNX33Q8WV41 574 aa10.47□□□□□ -0.73
VRK3-223ENST00000601341 THRSPQ92748 146 aa10.47□□□□□ -0.73
VRK3-223ENST00000601341 SLC25A36Q96CQ1 311 aa10.47□□□□□ -0.73
VRK3-223ENST00000601341 SCMH1Q96GD3 660 aa10.47□□□□□ -0.73
VRK3-223ENST00000601341 SMAD5Q99717 465 aaKnown RBP10.47□□□□□ -0.73
VRK3-223ENST00000601341 PTDSS2Q9BVG9 487 aa10.47□□□□□ -0.73
VRK3-223ENST00000601341 HDHD2Q9H0R4 259 aa10.47□□□□□ -0.73
VRK3-223ENST00000601341 PTTG3PQ9NZH4 202 aa10.47□□□□□ -0.73
VRK3-223ENST00000601341 NLKQ9UBE8 527 aa10.47□□□□□ -0.73
VRK3-223ENST00000601341 CAMK2AQ9UQM7 478 aa10.47□□□□□ -0.73
VRK3-223ENST00000601341 ALG5Q9Y673 324 aa10.47□□□□□ -0.73
VRK3-223ENST00000601341 OR2M5A3KFT3 312 aa10.47□□□□□ -0.73
VRK3-223ENST00000601341 C7orf66A4D0T2 115 aa10.47□□□□□ -0.73
VRK3-223ENST00000601341 H3BML4 177 aa10.47□□□□□ -0.73
VRK3-223ENST00000601341 BLOC1S5-TXNDC5H3BN57 136 aa10.47□□□□□ -0.73
VRK3-223ENST00000601341 DHFRP00374 187 aa10.47□□□□□ -0.73
VRK3-223ENST00000601341 CD14P08571 375 aa10.47□□□□□ -0.73
VRK3-223ENST00000601341 TACSTD2P09758 323 aa10.47□□□□□ -0.73
VRK3-223ENST00000601341 RFPL3SP0C7P2 107 aa10.47□□□□□ -0.73
VRK3-223ENST00000601341 SPI1P17947 270 aa10.47□□□□□ -0.73
VRK3-223ENST00000601341 IL11P20809 199 aa10.47□□□□□ -0.73
VRK3-223ENST00000601341 RPL4P36578 427 aaKnown RBP10.47□□□□□ -0.73
VRK3-223ENST00000601341 GZMKP49863 264 aa10.47□□□□□ -0.73
VRK3-223ENST00000601341 SCAND1P57086 179 aa10.47□□□□□ -0.73
VRK3-223ENST00000601341 RPS11P62280 158 aaKnown RBP eCLIP10.47□□□□□ -0.73
VRK3-223ENST00000601341 TLE3Q04726 772 aa10.47□□□□□ -0.73
VRK3-223ENST00000601341 FAPQ12884 760 aa10.47□□□□□ -0.73
VRK3-223ENST00000601341 MAB21L1Q13394 359 aa10.47□□□□□ -0.73
VRK3-223ENST00000601341 DYRK1AQ13627 763 aa10.47□□□□□ -0.73
VRK3-223ENST00000601341 GPR176Q14439 515 aa10.47□□□□□ -0.73
VRK3-223ENST00000601341 ZNF684Q5T5D7 378 aa10.47□□□□□ -0.73
VRK3-223ENST00000601341 LRRC69Q6ZNQ3 347 aa10.47□□□□□ -0.73
VRK3-223ENST00000601341 SSX6Q7RTT6 188 aa10.47□□□□□ -0.73
VRK3-223ENST00000601341 NANOGNBQ7Z5D8 188 aa10.47□□□□□ -0.73
VRK3-223ENST00000601341 SDR9C7Q8NEX9 313 aa10.47□□□□□ -0.73
VRK3-223ENST00000601341 OR4K13Q8NH42 304 aa10.47□□□□□ -0.73
VRK3-223ENST00000601341 OR14L1PQ8NHC6 308 aa10.47□□□□□ -0.73
VRK3-223ENST00000601341 MFSD8Q8NHS3 518 aa10.47□□□□□ -0.73
VRK3-223ENST00000601341 ZFAND1Q8TCF1 268 aa10.47□□□□□ -0.73
VRK3-223ENST00000601341 C15orf40Q8WUR7 153 aa10.47□□□□□ -0.73
VRK3-223ENST00000601341 AKAP1Q92667 903 aaKnown RBP eCLIP10.47□□□□□ -0.73
VRK3-223ENST00000601341 ARL5BQ96KC2 179 aa10.47□□□□□ -0.73
VRK3-223ENST00000601341 DCBLD2Q96PD2 775 aa10.47□□□□□ -0.73
VRK3-223ENST00000601341 EMC3Q9P0I2 261 aa10.47□□□□□ -0.73
VRK3-223ENST00000601341 MALT1Q9UDY8 824 aa10.47□□□□□ -0.73
VRK3-223ENST00000601341 NUBP2Q9Y5Y2 271 aa10.47□□□□□ -0.73
VRK3-223ENST00000601341 CACNG2Q9Y698 323 aa10.47□□□□□ -0.73
VRK3-223ENST00000601341 CPAMD8Q8IZJ3 1885 aa10.46□□□□□ -0.73
VRK3-223ENST00000601341 ACACAQ13085 2346 aa10.46□□□□□ -0.73
VRK3-223ENST00000601341 PCNX3Q9H6A9 2034 aa10.46□□□□□ -0.73
VRK3-223ENST00000601341 TRBV2A0A0J9YWF9 115 aa10.46□□□□□ -0.74
VRK3-223ENST00000601341 FTCDNL1E5RQL4 147 aa10.46□□□□□ -0.74
VRK3-223ENST00000601341 DVL2O14641 736 aa10.46□□□□□ -0.74
VRK3-223ENST00000601341 ARHGEF9O43307 516 aa10.46□□□□□ -0.74
VRK3-223ENST00000601341 TRAPPC6AO75865 159 aa10.46□□□□□ -0.74
VRK3-223ENST00000601341 MAPK3P27361 379 aaPredicted RBP10.46□□□□□ -0.74
VRK3-223ENST00000601341 SDHAP31040 664 aa10.46□□□□□ -0.74
VRK3-223ENST00000601341 ACVR1BP36896 505 aa10.46□□□□□ -0.74
VRK3-223ENST00000601341 MEOX1P50221 254 aa10.46□□□□□ -0.74
VRK3-223ENST00000601341 PLGLB1Q02325 96 aa10.46□□□□□ -0.74
VRK3-223ENST00000601341 CEP78Q5JTW2 689 aa10.46□□□□□ -0.74
VRK3-223ENST00000601341 GPR139Q6DWJ6 353 aa10.46□□□□□ -0.74
VRK3-223ENST00000601341 FAM122BQ7Z309 247 aa10.46□□□□□ -0.74
VRK3-223ENST00000601341 YRDCQ86U90 279 aaKnown RBP10.46□□□□□ -0.74
VRK3-223ENST00000601341 LILRB4Q8NHJ6 448 aa10.46□□□□□ -0.74
VRK3-223ENST00000601341 DEDD2Q8WXF8 326 aa10.46□□□□□ -0.74
VRK3-223ENST00000601341 ZMYND19Q96E35 227 aaPredicted RBP10.46□□□□□ -0.74
VRK3-223ENST00000601341 TTTY12Q9BZ98 90 aa10.46□□□□□ -0.74
VRK3-223ENST00000601341 ACTR6Q9GZN1 396 aa10.46□□□□□ -0.74
VRK3-223ENST00000601341 ABCG5Q9H222 651 aa10.46□□□□□ -0.74
VRK3-223ENST00000601341 DPAGT1Q9H3H5 408 aa10.46□□□□□ -0.74
VRK3-223ENST00000601341 ZNF703Q9H7S9 590 aaPredicted RBP10.46□□□□□ -0.74
VRK3-223ENST00000601341 ZNF281Q9Y2X9 895 aa10.46□□□□□ -0.74
VRK3-223ENST00000601341 RBMX2Q9Y388 322 aaKnown RBP10.46□□□□□ -0.74
VRK3-223ENST00000601341 HDGFL3Q9Y3E1 203 aa10.46□□□□□ -0.74
VRK3-223ENST00000601341 PCDHGA9Q9Y5G4 932 aaKnown RBP10.46□□□□□ -0.74
VRK3-223ENST00000601341 TRAV17A0A0B4J275 112 aa10.45□□□□□ -0.74
VRK3-223ENST00000601341 GJE1A6NN92 205 aa10.45□□□□□ -0.74
VRK3-223ENST00000601341 LINC01387J3KSC0 135 aa10.45□□□□□ -0.74
VRK3-223ENST00000601341 K7ENP7 123 aa10.45□□□□□ -0.74
VRK3-223ENST00000601341 SULT1B1O43704 296 aa10.45□□□□□ -0.74
VRK3-223ENST00000601341 ZNF432O94892 652 aa10.45□□□□□ -0.74
VRK3-223ENST00000601341 GYPBP06028 91 aa10.45□□□□□ -0.74
VRK3-223ENST00000601341 GRPRP30550 384 aa10.45□□□□□ -0.74
VRK3-223ENST00000601341 UQCRC1P31930 480 aa10.45□□□□□ -0.74
VRK3-223ENST00000601341 AQP2P41181 271 aa10.45□□□□□ -0.74
VRK3-223ENST00000601341 CENPAP49450 140 aa10.45□□□□□ -0.74
VRK3-223ENST00000601341 UCNP55089 124 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms