RNA–Protein interactions for RNA: ENST00000597641.1

PRKD2-210, Transcript of protein kinase D2, human

TSL 4

Gene PRKD2, Length 456 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKD2-210	ENST00000597641	HIST1H2AC	Q93077	130 aa		12.81	□□□□□ -0.36
PRKD2-210	ENST00000597641	MPP4	Q96JB8	637 aa		12.81	□□□□□ -0.36
PRKD2-210	ENST00000597641	SLC19A3	Q9BZV2	496 aa		12.81	□□□□□ -0.36
PRKD2-210	ENST00000597641	WNT5B	Q9H1J7	359 aa		12.81	□□□□□ -0.36
PRKD2-210	ENST00000597641	C1orf198	Q9H425	327 aa		12.81	□□□□□ -0.36
PRKD2-210	ENST00000597641	SIAE	Q9HAT2	523 aa		12.81	□□□□□ -0.36
PRKD2-210	ENST00000597641	MSL2	Q9HCI7	577 aa		12.81	□□□□□ -0.36
PRKD2-210	ENST00000597641	NPHS2	Q9NP85	383 aa		12.81	□□□□□ -0.36
PRKD2-210	ENST00000597641	INIP	Q9NRY2	104 aa		12.81	□□□□□ -0.36
PRKD2-210	ENST00000597641	UBAP1	Q9NZ09	502 aa		12.81	□□□□□ -0.36
PRKD2-210	ENST00000597641	GPR160	Q9UJ42	338 aa		12.81	□□□□□ -0.36
PRKD2-210	ENST00000597641	SOX21	Q9Y651	276 aa	Predicted RBP	12.81	□□□□□ -0.36
PRKD2-210	ENST00000597641	C5orf49	A4QMS7	147 aa		12.8	□□□□□ -0.36
PRKD2-210	ENST00000597641	TRAPPC2L	H3BP13	241 aa		12.8	□□□□□ -0.36
PRKD2-210	ENST00000597641		J3QLI3	93 aa		12.8	□□□□□ -0.36
PRKD2-210	ENST00000597641	FBP2	O00757	339 aa		12.8	□□□□□ -0.36
PRKD2-210	ENST00000597641	DRD4	P21917	467 aa		12.8	□□□□□ -0.36
PRKD2-210	ENST00000597641	ZNF84	P51523	738 aa		12.8	□□□□□ -0.36
PRKD2-210	ENST00000597641	TEK	Q02763	1124 aa		12.8	□□□□□ -0.36
PRKD2-210	ENST00000597641	PLP2	Q04941	152 aa		12.8	□□□□□ -0.36
PRKD2-210	ENST00000597641	PIN1	Q13526	163 aa	Predicted RBP	12.8	□□□□□ -0.36
PRKD2-210	ENST00000597641	SGCA	Q16586	387 aa		12.8	□□□□□ -0.36
PRKD2-210	ENST00000597641	MMEL1	Q495T6	779 aa		12.8	□□□□□ -0.36
PRKD2-210	ENST00000597641	DPPA2	Q7Z7J5	298 aa		12.8	□□□□□ -0.36
PRKD2-210	ENST00000597641	SIGLECL1	Q8N7X8	197 aa		12.8	□□□□□ -0.36
PRKD2-210	ENST00000597641	SGMS2	Q8NHU3	365 aa		12.8	□□□□□ -0.36
PRKD2-210	ENST00000597641	NANP	Q8TBE9	248 aa		12.8	□□□□□ -0.36
PRKD2-210	ENST00000597641	LRRC58	Q96CX6	371 aa		12.8	□□□□□ -0.36
PRKD2-210	ENST00000597641	ELMOD3	Q96FG2	381 aa		12.8	□□□□□ -0.36
PRKD2-210	ENST00000597641	ZNF48	Q96MX3	618 aa	Predicted RBP	12.8	□□□□□ -0.36
PRKD2-210	ENST00000597641	GAL3ST1	Q99999	423 aa		12.8	□□□□□ -0.36
PRKD2-210	ENST00000597641	SUCNR1	Q9BXA5	334 aa		12.8	□□□□□ -0.36
PRKD2-210	ENST00000597641	NDUFAF1	Q9Y375	327 aa		12.8	□□□□□ -0.36
PRKD2-210	ENST00000597641		A0A1W2PRG6	482 aa		12.79	□□□□□ -0.36
PRKD2-210	ENST00000597641	ISPD	A4D126	451 aa		12.79	□□□□□ -0.36
PRKD2-210	ENST00000597641	MCIDAS	D6RGH6	385 aa		12.79	□□□□□ -0.36
PRKD2-210	ENST00000597641	TMPRSS2	O15393	492 aa		12.79	□□□□□ -0.36
PRKD2-210	ENST00000597641	PTH	P01270	115 aa		12.79	□□□□□ -0.36
PRKD2-210	ENST00000597641	IGHV2-70	P01814	119 aa		12.79	□□□□□ -0.36
PRKD2-210	ENST00000597641	LAP3	P28838	519 aa		12.79	□□□□□ -0.36
PRKD2-210	ENST00000597641	OR1E2	P47887	323 aa		12.79	□□□□□ -0.36
PRKD2-210	ENST00000597641	SCGB2A2	Q13296	93 aa		12.79	□□□□□ -0.36
PRKD2-210	ENST00000597641	VMAC	Q2NL98	169 aa		12.79	□□□□□ -0.36
PRKD2-210	ENST00000597641	ZNF718	Q3SXZ3	478 aa		12.79	□□□□□ -0.36
PRKD2-210	ENST00000597641	TTMP	Q5BVD1	217 aa		12.79	□□□□□ -0.36
PRKD2-210	ENST00000597641	FAM209A	Q5JX71	171 aa		12.79	□□□□□ -0.36
PRKD2-210	ENST00000597641	MBNL2	Q5VZF2	373 aa	Known RBP	12.79	□□□□□ -0.36
PRKD2-210	ENST00000597641	ZNF774	Q6NX45	483 aa		12.79	□□□□□ -0.36
PRKD2-210	ENST00000597641	CCDC80	Q76M96	950 aa		12.79	□□□□□ -0.36
PRKD2-210	ENST00000597641	PATL1	Q86TB9	770 aa	Known RBP	12.79	□□□□□ -0.36
PRKD2-210	ENST00000597641	BPIFB2	Q8N4F0	458 aa		12.79	□□□□□ -0.36
PRKD2-210	ENST00000597641	ABHD4	Q8TB40	342 aa		12.79	□□□□□ -0.36
PRKD2-210	ENST00000597641	RAB1C	Q92928	201 aa		12.79	□□□□□ -0.36
PRKD2-210	ENST00000597641	ZMYND19	Q96E35	227 aa	Predicted RBP	12.79	□□□□□ -0.36
PRKD2-210	ENST00000597641	SGTB	Q96EQ0	304 aa		12.79	□□□□□ -0.36
PRKD2-210	ENST00000597641	DCLRE1C	Q96SD1	692 aa	Known RBP	12.79	□□□□□ -0.36
PRKD2-210	ENST00000597641	OR2H1	Q9GZK4	316 aa		12.79	□□□□□ -0.36
PRKD2-210	ENST00000597641	LRMDA	Q9H2I8	198 aa		12.79	□□□□□ -0.36
PRKD2-210	ENST00000597641	ZNF69	Q9UC07	566 aa		12.79	□□□□□ -0.36
PRKD2-210	ENST00000597641	SH3GLB1	Q9Y371	365 aa		12.79	□□□□□ -0.36
PRKD2-210	ENST00000597641	CENPBD1	B2RD01	187 aa		12.78	□□□□□ -0.36
PRKD2-210	ENST00000597641	FXYD1	O00168	92 aa		12.78	□□□□□ -0.36
PRKD2-210	ENST00000597641	ADH4	P08319	380 aa		12.78	□□□□□ -0.36
PRKD2-210	ENST00000597641	LIMS1	P48059	325 aa		12.78	□□□□□ -0.36
PRKD2-210	ENST00000597641	ERF	P50548	548 aa		12.78	□□□□□ -0.36
PRKD2-210	ENST00000597641	PPP1CB	P62140	327 aa		12.78	□□□□□ -0.36
PRKD2-210	ENST00000597641	TOP3A	Q13472	1001 aa	Predicted RBP	12.78	□□□□□ -0.36
PRKD2-210	ENST00000597641	FHL1	Q13642	323 aa		12.78	□□□□□ -0.36
PRKD2-210	ENST00000597641	NFYC	Q13952	458 aa		12.78	□□□□□ -0.36
PRKD2-210	ENST00000597641	RABL3	Q5HYI8	236 aa		12.78	□□□□□ -0.36
PRKD2-210	ENST00000597641	AGBL2	Q5U5Z8	902 aa		12.78	□□□□□ -0.36
PRKD2-210	ENST00000597641	OTP	Q5XKR4	325 aa		12.78	□□□□□ -0.36
PRKD2-210	ENST00000597641		Q6ZR03	302 aa		12.78	□□□□□ -0.36
PRKD2-210	ENST00000597641	IGFN1	Q86VF2	1251 aa		12.78	□□□□□ -0.36
PRKD2-210	ENST00000597641	CALHM3	Q86XJ0	350 aa		12.78	□□□□□ -0.36
PRKD2-210	ENST00000597641	LRRC75A	Q8NAA5	344 aa		12.78	□□□□□ -0.36
PRKD2-210	ENST00000597641	TMEM239	Q8WW34	195 aa		12.78	□□□□□ -0.36
PRKD2-210	ENST00000597641	LIPH	Q8WWY8	451 aa		12.78	□□□□□ -0.36
PRKD2-210	ENST00000597641	TIMD4	Q96H15	378 aa		12.78	□□□□□ -0.36
PRKD2-210	ENST00000597641	JMJD8	Q96S16	334 aa		12.78	□□□□□ -0.36
PRKD2-210	ENST00000597641	CCNB1IP1	Q9NPC3	277 aa		12.78	□□□□□ -0.36
PRKD2-210	ENST00000597641	RIMS3	Q9UJD0	308 aa		12.78	□□□□□ -0.36
PRKD2-210	ENST00000597641	ENTPD5	O75356	428 aa		12.77	□□□□□ -0.37
PRKD2-210	ENST00000597641	HKR1	P10072	659 aa		12.77	□□□□□ -0.37
PRKD2-210	ENST00000597641	GCH1	P30793	250 aa		12.77	□□□□□ -0.37
PRKD2-210	ENST00000597641	GDI2	P50395	445 aa	Known RBP	12.77	□□□□□ -0.37
PRKD2-210	ENST00000597641	DAP3	P51398	398 aa	Known RBP	12.77	□□□□□ -0.37
PRKD2-210	ENST00000597641	CD47	Q08722	323 aa		12.77	□□□□□ -0.37
PRKD2-210	ENST00000597641	PSG7	Q13046	419 aa		12.77	□□□□□ -0.37
PRKD2-210	ENST00000597641	ENDOG	Q14249	297 aa	Known RBP	12.77	□□□□□ -0.37
PRKD2-210	ENST00000597641	FAM27B	Q5VT28	67 aa		12.77	□□□□□ -0.37
PRKD2-210	ENST00000597641	NANOGP8	Q6NSW7	305 aa		12.77	□□□□□ -0.37
PRKD2-210	ENST00000597641	FOXL2NB	Q6ZUU3	175 aa		12.77	□□□□□ -0.37
PRKD2-210	ENST00000597641	SLC26A7	Q8TE54	656 aa		12.77	□□□□□ -0.37
PRKD2-210	ENST00000597641	SIGLEC11	Q96RL6	698 aa		12.77	□□□□□ -0.37
PRKD2-210	ENST00000597641	ZNF747	Q9BV97	191 aa		12.77	□□□□□ -0.37
PRKD2-210	ENST00000597641	TXNIP	Q9H3M7	391 aa		12.77	□□□□□ -0.37
PRKD2-210	ENST00000597641	GMPR2	Q9P2T1	348 aa	Known RBP	12.77	□□□□□ -0.37
PRKD2-210	ENST00000597641	EGFL7	Q9UHF1	273 aa		12.77	□□□□□ -0.37
PRKD2-210	ENST00000597641	NPTN	Q9Y639	398 aa		12.77	□□□□□ -0.37

Retrieved 100 of 20,778 RNA–protein pairs in 100.3 ms