RNA–Protein interactions for RNA: ENST00000597146.1

LIG1-214, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-214ENST00000597146 OR6S1Q8NH40 331 aa13.08□□□□□ -0.32
LIG1-214ENST00000597146 ST7LQ8TDW4 575 aa13.08□□□□□ -0.32
LIG1-214ENST00000597146 ADAMTS16Q8TE57 1224 aa13.08□□□□□ -0.32
LIG1-214ENST00000597146 SNX33Q8WV41 574 aa13.08□□□□□ -0.32
LIG1-214ENST00000597146 ZNF583Q96ND8 569 aa13.08□□□□□ -0.32
LIG1-214ENST00000597146 HOPXQ9BPY8 73 aaPredicted RBP13.08□□□□□ -0.32
LIG1-214ENST00000597146 WFDC6Q9BQY6 131 aa13.08□□□□□ -0.32
LIG1-214ENST00000597146 RSPO3Q9BXY4 272 aaPredicted RBP13.08□□□□□ -0.32
LIG1-214ENST00000597146 C1RLQ9NZP8 487 aa13.08□□□□□ -0.32
LIG1-214ENST00000597146 SLC7A8Q9UHI5 535 aa13.08□□□□□ -0.32
LIG1-214ENST00000597146 IGKV1D-42A0A075B6H8 117 aa13.07□□□□□ -0.32
LIG1-214ENST00000597146 C3orf80F5H4A9 247 aa13.07□□□□□ -0.32
LIG1-214ENST00000597146 M0R3G1 203 aa13.07□□□□□ -0.32
LIG1-214ENST00000597146 KPNA4O00629 521 aaPredicted RBP13.07□□□□□ -0.32
LIG1-214ENST00000597146 NDUFAB1O14561 156 aa13.07□□□□□ -0.32
LIG1-214ENST00000597146 TPST2O60704 377 aa13.07□□□□□ -0.32
LIG1-214ENST00000597146 GMNNO75496 209 aa13.07□□□□□ -0.32
LIG1-214ENST00000597146 FOXH1O75593 365 aa13.07□□□□□ -0.32
LIG1-214ENST00000597146 CH25HO95992 272 aa13.07□□□□□ -0.32
LIG1-214ENST00000597146 MT-ATP6P00846 226 aa13.07□□□□□ -0.32
LIG1-214ENST00000597146 ADORA3P0DMS8 318 aa13.07□□□□□ -0.32
LIG1-214ENST00000597146 B4GALT1P15291 398 aa13.07□□□□□ -0.32
LIG1-214ENST00000597146 ZNF12P17014 697 aa13.07□□□□□ -0.32
LIG1-214ENST00000597146 GZMMP51124 257 aa13.07□□□□□ -0.32
LIG1-214ENST00000597146 SEC61A1P61619 476 aaKnown RBP13.07□□□□□ -0.32
LIG1-214ENST00000597146 CALHM3Q86XJ0 350 aa13.07□□□□□ -0.32
LIG1-214ENST00000597146 MICU2Q8IYU8 434 aa13.07□□□□□ -0.32
LIG1-214ENST00000597146 PARP8Q8N3A8 854 aa13.07□□□□□ -0.32
LIG1-214ENST00000597146 SCAIQ8N9R8 606 aa13.07□□□□□ -0.32
LIG1-214ENST00000597146 OR6N1Q8NGY5 312 aa13.07□□□□□ -0.32
LIG1-214ENST00000597146 CMTM5Q96DZ9 223 aa13.07□□□□□ -0.32
LIG1-214ENST00000597146 MPP4Q96JB8 637 aa13.07□□□□□ -0.32
LIG1-214ENST00000597146 MRI1Q9BV20 369 aa13.07□□□□□ -0.32
LIG1-214ENST00000597146 SAP30LQ9HAJ7 183 aa13.07□□□□□ -0.32
LIG1-214ENST00000597146 NANSQ9NR45 359 aa13.07□□□□□ -0.32
LIG1-214ENST00000597146 DECR2Q9NUI1 292 aa13.07□□□□□ -0.32
LIG1-214ENST00000597146 MRPL39Q9NYK5 338 aaKnown RBP13.07□□□□□ -0.32
LIG1-214ENST00000597146 NKIRAS2Q9NYR9 191 aa13.07□□□□□ -0.32
LIG1-214ENST00000597146 B3GAT1Q9P2W7 334 aa13.07□□□□□ -0.32
LIG1-214ENST00000597146 POFUT2Q9Y2G5 429 aa13.07□□□□□ -0.32
LIG1-214ENST00000597146 DNAH3Q8TD57 4116 aa13.06□□□□□ -0.32
LIG1-214ENST00000597146 IGLV3-9A0A075B6K5 115 aa13.06□□□□□ -0.32
LIG1-214ENST00000597146 LOC102725191A0A1B0GVB3 256 aa13.06□□□□□ -0.32
LIG1-214ENST00000597146 CLPSL1A2RUU4 121 aa13.06□□□□□ -0.32
LIG1-214ENST00000597146 GMNCA6NCL1 334 aa13.06□□□□□ -0.32
LIG1-214ENST00000597146 FAM220BPB1ANY3 271 aa13.06□□□□□ -0.32
LIG1-214ENST00000597146 C11orf98E9PRG8 122 aa13.06□□□□□ -0.32
LIG1-214ENST00000597146 MS4A18H0YCH9 400 aa13.06□□□□□ -0.32
LIG1-214ENST00000597146 RNF13O43567 381 aa13.06□□□□□ -0.32
LIG1-214ENST00000597146 RAB36O95755 333 aa13.06□□□□□ -0.32
LIG1-214ENST00000597146 NGFP01138 241 aa13.06□□□□□ -0.32
LIG1-214ENST00000597146 IGHMP01871 453 aa13.06□□□□□ -0.32
LIG1-214ENST00000597146 BGLAPP02818 100 aa13.06□□□□□ -0.32
LIG1-214ENST00000597146 SELEP16581 610 aa13.06□□□□□ -0.32
LIG1-214ENST00000597146 KDELR2P33947 212 aa13.06□□□□□ -0.32
LIG1-214ENST00000597146 MTNR1AP48039 350 aa13.06□□□□□ -0.32
LIG1-214ENST00000597146 KLF3P57682 345 aaPredicted RBP13.06□□□□□ -0.32
LIG1-214ENST00000597146 PUDPQ08623 228 aa13.06□□□□□ -0.32
LIG1-214ENST00000597146 RAB39AQ14964 217 aa13.06□□□□□ -0.32
LIG1-214ENST00000597146 NPTX1Q15818 432 aa13.06□□□□□ -0.32
LIG1-214ENST00000597146 TAF9Q16594 264 aa13.06□□□□□ -0.32
LIG1-214ENST00000597146 MS4A18Q3C1V0 323 aa13.06□□□□□ -0.32
LIG1-214ENST00000597146 CYBRD1Q53TN4 286 aa13.06□□□□□ -0.32
LIG1-214ENST00000597146 ZNF362Q5T0B9 420 aaPredicted RBP13.06□□□□□ -0.32
LIG1-214ENST00000597146 FIP1L1Q6UN15 594 aaKnown RBP13.06□□□□□ -0.32
LIG1-214ENST00000597146 ZNF813Q6ZN06 617 aa13.06□□□□□ -0.32
LIG1-214ENST00000597146 FKBP9P1Q75LS8 142 aa13.06□□□□□ -0.32
LIG1-214ENST00000597146 ZNF584Q8IVC4 421 aa13.06□□□□□ -0.32
LIG1-214ENST00000597146 OR5J2Q8NH18 312 aa13.06□□□□□ -0.32
LIG1-214ENST00000597146 CCL17Q92583 94 aa13.06□□□□□ -0.32
LIG1-214ENST00000597146 SLC41A3Q96GZ6 507 aa13.06□□□□□ -0.32
LIG1-214ENST00000597146 OR2M2Q96R28 347 aa13.06□□□□□ -0.32
LIG1-214ENST00000597146 INSIG2Q9Y5U4 225 aa13.06□□□□□ -0.32
LIG1-214ENST00000597146 PLPP3O14495 311 aa13.05□□□□□ -0.32
LIG1-214ENST00000597146 SHOX2O60902 331 aaPredicted RBP13.05□□□□□ -0.32
LIG1-214ENST00000597146 ZNF682O95780 498 aa13.05□□□□□ -0.32
LIG1-214ENST00000597146 OR1E2P47887 323 aa13.05□□□□□ -0.32
LIG1-214ENST00000597146 NUDT2P50583 147 aa13.05□□□□□ -0.32
LIG1-214ENST00000597146 LIPEQ05469 1076 aa13.05□□□□□ -0.32
LIG1-214ENST00000597146 C9orf139Q6ZV77 190 aa13.05□□□□□ -0.32
LIG1-214ENST00000597146 TMEM123Q8N131 208 aa13.05□□□□□ -0.32
LIG1-214ENST00000597146 PAQR4Q8N4S7 273 aaPredicted RBP13.05□□□□□ -0.32
LIG1-214ENST00000597146 ADPRHL1Q8NDY3 354 aa13.05□□□□□ -0.32
LIG1-214ENST00000597146 OR4D11Q8NGI4 311 aa13.05□□□□□ -0.32
LIG1-214ENST00000597146 MOGAT1Q96PD6 335 aa13.05□□□□□ -0.32
LIG1-214ENST00000597146 EMC6Q9BV81 110 aa13.05□□□□□ -0.32
LIG1-214ENST00000597146 MARCH7Q9H992 704 aa13.05□□□□□ -0.32
LIG1-214ENST00000597146 GPR160Q9UJ42 338 aa13.05□□□□□ -0.32
LIG1-214ENST00000597146 RIMS3Q9UJD0 308 aa13.05□□□□□ -0.32
LIG1-214ENST00000597146 TET2Q6N021 2002 aaPredicted RBP13.05□□□□□ -0.32
LIG1-214ENST00000597146 EPPK1P58107 5090 aaKnown RBP13.04□□□□□ -0.32
LIG1-214ENST00000597146 BIRC6Q9NR09 4857 aa13.04□□□□□ -0.32
LIG1-214ENST00000597146 TRAV40A0A0B4J280 105 aa13.04□□□□□ -0.32
LIG1-214ENST00000597146 LRRN3E7EW58 273 aa13.04□□□□□ -0.32
LIG1-214ENST00000597146 BLOC1S5-TXNDC5H3BN57 136 aa13.04□□□□□ -0.32
LIG1-214ENST00000597146 FXYD1O00168 92 aa13.04□□□□□ -0.32
LIG1-214ENST00000597146 NDUFA7O95182 113 aa13.04□□□□□ -0.32
LIG1-214ENST00000597146 CRYBA1P05813 215 aa13.04□□□□□ -0.32
LIG1-214ENST00000597146 PATE4P0C8F1 98 aa13.04□□□□□ -0.32
LIG1-214ENST00000597146 OR8G3PP0DMU2 310 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 89.5 ms