RNA–Protein interactions for RNA: ENST00000595945.5

SHKBP1-211, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-211ENST00000595945 ZNF322Q6U7Q0 402 aaPredicted RBP13□□□□□ -0.33
SHKBP1-211ENST00000595945 GFRALQ6UXV0 394 aa13□□□□□ -0.33
SHKBP1-211ENST00000595945 ZC3HAV1Q7Z2W4 902 aaKnown RBP13□□□□□ -0.33
SHKBP1-211ENST00000595945 DPY19L4Q7Z388 723 aa13□□□□□ -0.33
SHKBP1-211ENST00000595945 GPR137CQ8N3F9 429 aa13□□□□□ -0.33
SHKBP1-211ENST00000595945 KLHL36Q8N4N3 616 aa13□□□□□ -0.33
SHKBP1-211ENST00000595945 OR13F1Q8NGS4 319 aa13□□□□□ -0.33
SHKBP1-211ENST00000595945 OTOSQ8NHW6 89 aa13□□□□□ -0.33
SHKBP1-211ENST00000595945 APH1AQ96BI3 265 aa13□□□□□ -0.33
SHKBP1-211ENST00000595945 ZNF837Q96EG3 531 aaPredicted RBP13□□□□□ -0.33
SHKBP1-211ENST00000595945 COG8Q96MW5 612 aa13□□□□□ -0.33
SHKBP1-211ENST00000595945 TM9SF2Q99805 663 aa13□□□□□ -0.33
SHKBP1-211ENST00000595945 ALG8Q9BVK2 526 aa13□□□□□ -0.33
SHKBP1-211ENST00000595945 SLC7A10Q9NS82 523 aa13□□□□□ -0.33
SHKBP1-211ENST00000595945 KCNG2Q9UJ96 466 aa13□□□□□ -0.33
SHKBP1-211ENST00000595945 A0A1W2PPL8 197 aa12.99□□□□□ -0.33
SHKBP1-211ENST00000595945 DPPA5A6NC42 116 aa12.99□□□□□ -0.33
SHKBP1-211ENST00000595945 ZNF670-ZNF695F2Z2N8 137 aa12.99□□□□□ -0.33
SHKBP1-211ENST00000595945 HLA-DQA2P01906 255 aa12.99□□□□□ -0.33
SHKBP1-211ENST00000595945 CDAP32320 146 aa12.99□□□□□ -0.33
SHKBP1-211ENST00000595945 KIR2DL2P43627 348 aaPredicted RBP12.99□□□□□ -0.33
SHKBP1-211ENST00000595945 ZNF84P51523 738 aa12.99□□□□□ -0.33
SHKBP1-211ENST00000595945 WNT4P56705 351 aa12.99□□□□□ -0.33
SHKBP1-211ENST00000595945 MRPS34P82930 218 aaKnown RBP12.99□□□□□ -0.33
SHKBP1-211ENST00000595945 ACSM1Q08AH1 577 aa12.99□□□□□ -0.33
SHKBP1-211ENST00000595945 SPHARQ15513 63 aa12.99□□□□□ -0.33
SHKBP1-211ENST00000595945 CDONQ4KMG0 1287 aa12.99□□□□□ -0.33
SHKBP1-211ENST00000595945 OTPQ5XKR4 325 aa12.99□□□□□ -0.33
SHKBP1-211ENST00000595945 FAM214BQ7L5A3 538 aa12.99□□□□□ -0.33
SHKBP1-211ENST00000595945 SATL1Q86VE3 508 aa12.99□□□□□ -0.33
SHKBP1-211ENST00000595945 EGFL6Q8IUX8 553 aa12.99□□□□□ -0.33
SHKBP1-211ENST00000595945 SYS1Q8N2H4 156 aa12.99□□□□□ -0.33
SHKBP1-211ENST00000595945 ZNF454Q8N9F8 522 aa12.99□□□□□ -0.33
SHKBP1-211ENST00000595945 ALKBH3Q96Q83 286 aaPredicted RBP12.99□□□□□ -0.33
SHKBP1-211ENST00000595945 TP63Q9H3D4 680 aaPredicted RBP12.99□□□□□ -0.33
SHKBP1-211ENST00000595945 CRLF2Q9HC73 371 aa12.99□□□□□ -0.33
SHKBP1-211ENST00000595945 ISYNA1Q9NPH2 558 aa12.99□□□□□ -0.33
SHKBP1-211ENST00000595945 TMEM14AQ9Y6G1 99 aa12.99□□□□□ -0.33
SHKBP1-211ENST00000595945 CFAP46Q8IYW2 2715 aa12.99□□□□□ -0.33
SHKBP1-211ENST00000595945 TTLL8A6PVC2 850 aa12.98□□□□□ -0.33
SHKBP1-211ENST00000595945 PHYHO14832 338 aa12.98□□□□□ -0.33
SHKBP1-211ENST00000595945 TOXO94900 526 aa12.98□□□□□ -0.33
SHKBP1-211ENST00000595945 CRHP06850 196 aa12.98□□□□□ -0.33
SHKBP1-211ENST00000595945 ZNF823P16415 610 aa12.98□□□□□ -0.33
SHKBP1-211ENST00000595945 MSR1P21757 451 aa12.98□□□□□ -0.33
SHKBP1-211ENST00000595945 CEACAM8P31997 349 aaPredicted RBP12.98□□□□□ -0.33
SHKBP1-211ENST00000595945 TIMP3P35625 211 aa12.98□□□□□ -0.33
SHKBP1-211ENST00000595945 RPS27P42677 84 aaKnown RBP12.98□□□□□ -0.33
SHKBP1-211ENST00000595945 LSM6P62312 80 aaKnown RBP12.98□□□□□ -0.33
SHKBP1-211ENST00000595945 ADAM8P78325 824 aa12.98□□□□□ -0.33
SHKBP1-211ENST00000595945 ROR2Q01974 943 aaKnown RBP12.98□□□□□ -0.33
SHKBP1-211ENST00000595945 CEACAM16Q2WEN9 425 aa12.98□□□□□ -0.33
SHKBP1-211ENST00000595945 TMPRSS11AQ6ZMR5 421 aa12.98□□□□□ -0.33
SHKBP1-211ENST00000595945 ZNF627Q7L945 461 aa12.98□□□□□ -0.33
SHKBP1-211ENST00000595945 GPR141Q7Z602 305 aa12.98□□□□□ -0.33
SHKBP1-211ENST00000595945 DOLPP1Q86YN1 238 aa12.98□□□□□ -0.33
SHKBP1-211ENST00000595945 ZNF100Q8IYN0 542 aa12.98□□□□□ -0.33
SHKBP1-211ENST00000595945 OR6K3Q8NGY3 331 aa12.98□□□□□ -0.33
SHKBP1-211ENST00000595945 ST7LQ8TDW4 575 aa12.98□□□□□ -0.33
SHKBP1-211ENST00000595945 SPRYD4Q8WW59 207 aaPredicted RBP12.98□□□□□ -0.33
SHKBP1-211ENST00000595945 ZFP3Q96NJ6 502 aa12.98□□□□□ -0.33
SHKBP1-211ENST00000595945 CNTNAP3BQ96NU0 1288 aa12.98□□□□□ -0.33
SHKBP1-211ENST00000595945 OPALINQ96PE5 141 aa12.98□□□□□ -0.33
SHKBP1-211ENST00000595945 AMELYQ99218 206 aa12.98□□□□□ -0.33
SHKBP1-211ENST00000595945 RBM24Q9BX46 236 aaKnown RBP12.98□□□□□ -0.33
SHKBP1-211ENST00000595945 CNTNAP3Q9BZ76 1288 aa12.98□□□□□ -0.33
SHKBP1-211ENST00000595945 ISG20L2Q9H9L3 353 aaKnown RBP12.98□□□□□ -0.33
SHKBP1-211ENST00000595945 EMC7Q9NPA0 242 aa12.98□□□□□ -0.33
SHKBP1-211ENST00000595945 TMEM38BQ9NVV0 291 aa12.98□□□□□ -0.33
SHKBP1-211ENST00000595945 MALT1Q9UDY8 824 aa12.98□□□□□ -0.33
SHKBP1-211ENST00000595945 CYB5R1Q9UHQ9 305 aa12.98□□□□□ -0.33
SHKBP1-211ENST00000595945 EMC9Q9Y3B6 208 aa12.98□□□□□ -0.33
SHKBP1-211ENST00000595945 ESPL1Q14674 2120 aa12.97□□□□□ -0.33
SHKBP1-211ENST00000595945 HIVEP3Q5T1R4 2406 aa12.97□□□□□ -0.33
SHKBP1-211ENST00000595945 PRRG2O14669 202 aa12.97□□□□□ -0.33
SHKBP1-211ENST00000595945 SLC19A2O60779 497 aa12.97□□□□□ -0.33
SHKBP1-211ENST00000595945 TNFSF13O75888 250 aa12.97□□□□□ -0.33
SHKBP1-211ENST00000595945 ABHD16AO95870 558 aa12.97□□□□□ -0.33
SHKBP1-211ENST00000595945 LALBAP00709 142 aa12.97□□□□□ -0.33
SHKBP1-211ENST00000595945 SPARCP09486 303 aa12.97□□□□□ -0.33
SHKBP1-211ENST00000595945 PSMB9P28065 219 aa12.97□□□□□ -0.33
SHKBP1-211ENST00000595945 TTKP33981 857 aa12.97□□□□□ -0.33
SHKBP1-211ENST00000595945 TGFBR2P37173 567 aa12.97□□□□□ -0.33
SHKBP1-211ENST00000595945 CAPZA2P47755 286 aa12.97□□□□□ -0.33
SHKBP1-211ENST00000595945 ACTA2P62736 377 aa12.97□□□□□ -0.33
SHKBP1-211ENST00000595945 ACTG2P63267 376 aa12.97□□□□□ -0.33
SHKBP1-211ENST00000595945 FOXF2Q12947 444 aa12.97□□□□□ -0.33
SHKBP1-211ENST00000595945 ENDOGQ14249 297 aaKnown RBP12.97□□□□□ -0.33
SHKBP1-211ENST00000595945 TIGD6Q17RP2 521 aa12.97□□□□□ -0.33
SHKBP1-211ENST00000595945 EIF2S3LQ2VIR3 472 aaKnown RBP12.97□□□□□ -0.33
SHKBP1-211ENST00000595945 SLC18B1Q6NT16 456 aa12.97□□□□□ -0.33
SHKBP1-211ENST00000595945 TFAP2EQ6VUC0 442 aa12.97□□□□□ -0.33
SHKBP1-211ENST00000595945 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.97□□□□□ -0.33
SHKBP1-211ENST00000595945 GCNT2Q8N0V5 402 aa12.97□□□□□ -0.33
SHKBP1-211ENST00000595945 RPRMLQ8N4K4 120 aa12.97□□□□□ -0.33
SHKBP1-211ENST00000595945 OR10H5Q8NGA6 315 aa12.97□□□□□ -0.33
SHKBP1-211ENST00000595945 ASB17Q8WXJ9 295 aa12.97□□□□□ -0.33
SHKBP1-211ENST00000595945 YIPF6Q96EC8 236 aa12.97□□□□□ -0.33
SHKBP1-211ENST00000595945 MRPL48Q96GC5 212 aaKnown RBP12.97□□□□□ -0.33
SHKBP1-211ENST00000595945 MGLLQ99685 303 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms