RNA–Protein interactions for RNA: ENST00000595726.1

SHKBP1-208, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 684 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-208ENST00000595726 SLC15A3Q8IY34 581 aa11.61□□□□□ -0.55
SHKBP1-208ENST00000595726 MICU2Q8IYU8 434 aa11.61□□□□□ -0.55
SHKBP1-208ENST00000595726 PAQR4Q8N4S7 273 aaPredicted RBP11.61□□□□□ -0.55
SHKBP1-208ENST00000595726 SCAIQ8N9R8 606 aa11.61□□□□□ -0.55
SHKBP1-208ENST00000595726 OR4F5Q8NH21 305 aa11.61□□□□□ -0.55
SHKBP1-208ENST00000595726 FGFBP3Q8TAT2 258 aa11.61□□□□□ -0.55
SHKBP1-208ENST00000595726 ST7LQ8TDW4 575 aa11.61□□□□□ -0.55
SHKBP1-208ENST00000595726 OR2M2Q96R28 347 aa11.61□□□□□ -0.55
SHKBP1-208ENST00000595726 ZNF426Q9BUY5 554 aa11.61□□□□□ -0.55
SHKBP1-208ENST00000595726 ASPNQ9BXN1 380 aa11.61□□□□□ -0.55
SHKBP1-208ENST00000595726 NSRP1Q9H0G5 558 aaKnown RBP11.61□□□□□ -0.55
SHKBP1-208ENST00000595726 DECR2Q9NUI1 292 aa11.61□□□□□ -0.55
SHKBP1-208ENST00000595726 C1RLQ9NZP8 487 aa11.61□□□□□ -0.55
SHKBP1-208ENST00000595726 GMPR2Q9P2T1 348 aaKnown RBP11.61□□□□□ -0.55
SHKBP1-208ENST00000595726 BAG5Q9UL15 447 aa11.61□□□□□ -0.55
SHKBP1-208ENST00000595726 SH3GLB1Q9Y371 365 aa11.61□□□□□ -0.55
SHKBP1-208ENST00000595726 PPIAL4EA0A075B759 164 aa11.6□□□□□ -0.55
SHKBP1-208ENST00000595726 PPIAL4CA0A0B4J2A2 164 aa11.6□□□□□ -0.55
SHKBP1-208ENST00000595726 A0A1B0GUS0 222 aa11.6□□□□□ -0.55
SHKBP1-208ENST00000595726 LOC102725191A0A1B0GVB3 256 aa11.6□□□□□ -0.55
SHKBP1-208ENST00000595726 PPIAL4DF5H284 164 aa11.6□□□□□ -0.55
SHKBP1-208ENST00000595726 MS4A18H0YCH9 400 aa11.6□□□□□ -0.55
SHKBP1-208ENST00000595726 NME4O00746 187 aa11.6□□□□□ -0.55
SHKBP1-208ENST00000595726 PIN1P1O15428 100 aa11.6□□□□□ -0.55
SHKBP1-208ENST00000595726 FOXH1O75593 365 aa11.6□□□□□ -0.55
SHKBP1-208ENST00000595726 HPRP00739 348 aa11.6□□□□□ -0.55
SHKBP1-208ENST00000595726 MT-ATP6P00846 226 aa11.6□□□□□ -0.55
SHKBP1-208ENST00000595726 PPIAL4FP0DN26 164 aa11.6□□□□□ -0.55
SHKBP1-208ENST00000595726 B4GALT1P15291 398 aa11.6□□□□□ -0.55
SHKBP1-208ENST00000595726 NQO1P15559 274 aaKnown RBP11.6□□□□□ -0.55
SHKBP1-208ENST00000595726 SELEP16581 610 aa11.6□□□□□ -0.55
SHKBP1-208ENST00000595726 KDELR2P33947 212 aa11.6□□□□□ -0.55
SHKBP1-208ENST00000595726 SLC7A2P52569 658 aa11.6□□□□□ -0.55
SHKBP1-208ENST00000595726 GYS2P54840 703 aa11.6□□□□□ -0.55
SHKBP1-208ENST00000595726 KLF3P57682 345 aaPredicted RBP11.6□□□□□ -0.55
SHKBP1-208ENST00000595726 SEC61A1P61619 476 aaKnown RBP11.6□□□□□ -0.55
SHKBP1-208ENST00000595726 C1DQ13901 141 aaKnown RBP11.6□□□□□ -0.55
SHKBP1-208ENST00000595726 MS4A18Q3C1V0 323 aa11.6□□□□□ -0.55
SHKBP1-208ENST00000595726 TMEM123Q8N131 208 aa11.6□□□□□ -0.55
SHKBP1-208ENST00000595726 SYNPRQ8TBG9 265 aa11.6□□□□□ -0.55
SHKBP1-208ENST00000595726 MPP4Q96JB8 637 aa11.6□□□□□ -0.55
SHKBP1-208ENST00000595726 EMC6Q9BV81 110 aa11.6□□□□□ -0.55
SHKBP1-208ENST00000595726 DCAF16Q9NXF7 216 aa11.6□□□□□ -0.55
SHKBP1-208ENST00000595726 MRPL39Q9NYK5 338 aaKnown RBP11.6□□□□□ -0.55
SHKBP1-208ENST00000595726 NKIRAS2Q9NYR9 191 aa11.6□□□□□ -0.55
SHKBP1-208ENST00000595726 AP3M1Q9Y2T2 418 aa11.6□□□□□ -0.55
SHKBP1-208ENST00000595726 INSIG2Q9Y5U4 225 aa11.6□□□□□ -0.55
SHKBP1-208ENST00000595726 CLPSL1A2RUU4 121 aa11.59□□□□□ -0.55
SHKBP1-208ENST00000595726 GMNCA6NCL1 334 aa11.59□□□□□ -0.55
SHKBP1-208ENST00000595726 SLC22A31A6NKX4 558 aa11.59□□□□□ -0.55
SHKBP1-208ENST00000595726 SHOX2O60902 331 aaPredicted RBP11.59□□□□□ -0.55
SHKBP1-208ENST00000595726 IFNA14P01570 189 aa11.59□□□□□ -0.55
SHKBP1-208ENST00000595726 HLA-DOBP13765 273 aa11.59□□□□□ -0.55
SHKBP1-208ENST00000595726 ZNF12P17014 697 aa11.59□□□□□ -0.55
SHKBP1-208ENST00000595726 OR1E2P47887 323 aa11.59□□□□□ -0.55
SHKBP1-208ENST00000595726 MTNR1AP48039 350 aa11.59□□□□□ -0.55
SHKBP1-208ENST00000595726 NUDT2P50583 147 aa11.59□□□□□ -0.55
SHKBP1-208ENST00000595726 SELENOVP59797 346 aa11.59□□□□□ -0.55
SHKBP1-208ENST00000595726 LIPEQ05469 1076 aa11.59□□□□□ -0.55
SHKBP1-208ENST00000595726 PUDPQ08623 228 aa11.59□□□□□ -0.55
SHKBP1-208ENST00000595726 ZNF74Q16587 644 aa11.59□□□□□ -0.55
SHKBP1-208ENST00000595726 TAF9Q16594 264 aa11.59□□□□□ -0.55
SHKBP1-208ENST00000595726 BEAN1Q3B7T3 259 aa11.59□□□□□ -0.55
SHKBP1-208ENST00000595726 CYBRD1Q53TN4 286 aa11.59□□□□□ -0.55
SHKBP1-208ENST00000595726 SPRNQ5BIV9 151 aa11.59□□□□□ -0.55
SHKBP1-208ENST00000595726 TTC33Q6PID6 262 aaPredicted RBP11.59□□□□□ -0.55
SHKBP1-208ENST00000595726 FIP1L1Q6UN15 594 aaKnown RBP11.59□□□□□ -0.55
SHKBP1-208ENST00000595726 HACD2Q6Y1H2 254 aa11.59□□□□□ -0.55
SHKBP1-208ENST00000595726 UEVLDQ8IX04 471 aa11.59□□□□□ -0.55
SHKBP1-208ENST00000595726 C10orf53Q8N6V4 93 aa11.59□□□□□ -0.55
SHKBP1-208ENST00000595726 PIK3C3Q8NEB9 887 aa11.59□□□□□ -0.55
SHKBP1-208ENST00000595726 OR52E2Q8NGJ4 325 aa11.59□□□□□ -0.55
SHKBP1-208ENST00000595726 SNX33Q8WV41 574 aa11.59□□□□□ -0.55
SHKBP1-208ENST00000595726 HOPXQ9BPY8 73 aaPredicted RBP11.59□□□□□ -0.55
SHKBP1-208ENST00000595726 PRSS27Q9BQR3 290 aa11.59□□□□□ -0.55
SHKBP1-208ENST00000595726 MRI1Q9BV20 369 aa11.59□□□□□ -0.55
SHKBP1-208ENST00000595726 POLR2J2Q9GZM3 115 aaKnown RBP11.59□□□□□ -0.55
SHKBP1-208ENST00000595726 POLR2J3Q9H1A7 115 aaKnown RBP11.59□□□□□ -0.55
SHKBP1-208ENST00000595726 EFCAB1Q9HAE3 211 aa11.59□□□□□ -0.55
SHKBP1-208ENST00000595726 SAP30LQ9HAJ7 183 aa11.59□□□□□ -0.55
SHKBP1-208ENST00000595726 EGFL7Q9UHF1 273 aa11.59□□□□□ -0.55
SHKBP1-208ENST00000595726 SLC7A8Q9UHI5 535 aa11.59□□□□□ -0.55
SHKBP1-208ENST00000595726 GPR160Q9UJ42 338 aa11.59□□□□□ -0.55
SHKBP1-208ENST00000595726 IGLV3-9A0A075B6K5 115 aa11.58□□□□□ -0.56
SHKBP1-208ENST00000595726 KPNA4O00629 521 aaPredicted RBP11.58□□□□□ -0.56
SHKBP1-208ENST00000595726 PLPP3O14495 311 aa11.58□□□□□ -0.56
SHKBP1-208ENST00000595726 SPRY3O43610 288 aa11.58□□□□□ -0.56
SHKBP1-208ENST00000595726 AKAP8O43823 692 aaKnown RBP11.58□□□□□ -0.56
SHKBP1-208ENST00000595726 UBOX5O94941 541 aa11.58□□□□□ -0.56
SHKBP1-208ENST00000595726 RAB36O95755 333 aa11.58□□□□□ -0.56
SHKBP1-208ENST00000595726 NGFP01138 241 aa11.58□□□□□ -0.56
SHKBP1-208ENST00000595726 IGHMP01871 453 aa11.58□□□□□ -0.56
SHKBP1-208ENST00000595726 SERPINA5P05154 406 aa11.58□□□□□ -0.56
SHKBP1-208ENST00000595726 CRYBA1P05813 215 aa11.58□□□□□ -0.56
SHKBP1-208ENST00000595726 LCKP06239 509 aa11.58□□□□□ -0.56
SHKBP1-208ENST00000595726 SBK2P0C263 348 aa11.58□□□□□ -0.56
SHKBP1-208ENST00000595726 OR8G3PP0DMU2 310 aa11.58□□□□□ -0.56
SHKBP1-208ENST00000595726 ZNF250P15622 560 aa11.58□□□□□ -0.56
SHKBP1-208ENST00000595726 PRDX6P30041 224 aa11.58□□□□□ -0.56
SHKBP1-208ENST00000595726 CD80P33681 288 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms