RNA–Protein interactions for RNA: ENST00000594297.1

FOXA3-202, Transcript of forkhead box A3, humanhuman

TSL 3

Gene FOXA3, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA3-202ENST00000594297 PITX2Q99697 317 aa13.48□□□□□ -0.25
FOXA3-202ENST00000594297 PLA2G12AQ9BZM1 189 aa13.48□□□□□ -0.25
FOXA3-202ENST00000594297 H2AFY2Q9P0M6 372 aaPredicted RBP13.48□□□□□ -0.25
FOXA3-202ENST00000594297 KLHL13Q9P2N7 655 aa13.48□□□□□ -0.25
FOXA3-202ENST00000594297 SEC14L4Q9UDX3 406 aa13.48□□□□□ -0.25
FOXA3-202ENST00000594297 OR6C65A6NJZ3 312 aa13.47□□□□□ -0.25
FOXA3-202ENST00000594297 SHISA9B4DS77 424 aa13.47□□□□□ -0.25
FOXA3-202ENST00000594297 DLGAP1O14490 977 aa13.47□□□□□ -0.25
FOXA3-202ENST00000594297 BHLHE40O14503 412 aa13.47□□□□□ -0.25
FOXA3-202ENST00000594297 AHCYL1O43865 530 aa13.47□□□□□ -0.25
FOXA3-202ENST00000594297 TXNDC12O95881 172 aa13.47□□□□□ -0.25
FOXA3-202ENST00000594297 IGHMP01871 453 aa13.47□□□□□ -0.25
FOXA3-202ENST00000594297 IFNGR1P15260 489 aa13.47□□□□□ -0.25
FOXA3-202ENST00000594297 SLC16A1P53985 500 aa13.47□□□□□ -0.25
FOXA3-202ENST00000594297 RUNX1T1Q06455 604 aa13.47□□□□□ -0.25
FOXA3-202ENST00000594297 ITGADQ13349 1161 aa13.47□□□□□ -0.25
FOXA3-202ENST00000594297 FHL1Q13642 323 aa13.47□□□□□ -0.25
FOXA3-202ENST00000594297 SLC17A1Q14916 467 aa13.47□□□□□ -0.25
FOXA3-202ENST00000594297 SFRP5Q5T4F7 317 aa13.47□□□□□ -0.25
FOXA3-202ENST00000594297 TMEM236Q5W0B7 351 aa13.47□□□□□ -0.25
FOXA3-202ENST00000594297 C12orf73Q69YU5 71 aa13.47□□□□□ -0.25
FOXA3-202ENST00000594297 ABLIM2Q6H8Q1 611 aa13.47□□□□□ -0.25
FOXA3-202ENST00000594297 CREB3L2Q70SY1 520 aa13.47□□□□□ -0.25
FOXA3-202ENST00000594297 IQCF1Q8N6M8 205 aa13.47□□□□□ -0.25
FOXA3-202ENST00000594297 ZNF525Q8N782 197 aa13.47□□□□□ -0.25
FOXA3-202ENST00000594297 LRRC75AQ8NAA5 344 aa13.47□□□□□ -0.25
FOXA3-202ENST00000594297 HTRA1Q92743 480 aa13.47□□□□□ -0.25
FOXA3-202ENST00000594297 RBP7Q96R05 134 aa13.47□□□□□ -0.25
FOXA3-202ENST00000594297 CACNG6Q9BXT2 260 aa13.47□□□□□ -0.25
FOXA3-202ENST00000594297 FAIMQ9NVQ4 179 aa13.47□□□□□ -0.25
FOXA3-202ENST00000594297 CISD1Q9NZ45 108 aaKnown RBP13.47□□□□□ -0.25
FOXA3-202ENST00000594297 ZNF346Q9UL40 294 aaKnown RBP13.47□□□□□ -0.25
FOXA3-202ENST00000594297 LRRC42Q9Y546 428 aa13.47□□□□□ -0.25
FOXA3-202ENST00000594297 ZNF724A8MTY0 619 aa13.46□□□□□ -0.25
FOXA3-202ENST00000594297 CENPBD1B2RD01 187 aa13.46□□□□□ -0.25
FOXA3-202ENST00000594297 IGHG1P01857 330 aa13.46□□□□□ -0.25
FOXA3-202ENST00000594297 YES1P07947 543 aa13.46□□□□□ -0.25
FOXA3-202ENST00000594297 SLC25A16P16260 332 aa13.46□□□□□ -0.25
FOXA3-202ENST00000594297 P2RY4P51582 365 aa13.46□□□□□ -0.25
FOXA3-202ENST00000594297 BIDP55957 195 aa13.46□□□□□ -0.25
FOXA3-202ENST00000594297 CLDN17P56750 224 aa13.46□□□□□ -0.25
FOXA3-202ENST00000594297 FXYD6P3P58550 94 aa13.46□□□□□ -0.25
FOXA3-202ENST00000594297 KRR1Q13601 381 aaKnown RBP13.46□□□□□ -0.25
FOXA3-202ENST00000594297 SLC35F1Q5T1Q4 408 aa13.46□□□□□ -0.25
FOXA3-202ENST00000594297 ZNF691Q5VV52 312 aa13.46□□□□□ -0.25
FOXA3-202ENST00000594297 MEDAGQ5VYS4 303 aa13.46□□□□□ -0.25
FOXA3-202ENST00000594297 CYB5R2Q6BCY4 276 aa13.46□□□□□ -0.25
FOXA3-202ENST00000594297 C11orf71Q6IPW1 123 aa13.46□□□□□ -0.25
FOXA3-202ENST00000594297 ACSM5Q6NUN0 579 aa13.46□□□□□ -0.25
FOXA3-202ENST00000594297 AAED1Q7RTV5 226 aa13.46□□□□□ -0.25
FOXA3-202ENST00000594297 NUFIP2Q7Z417 695 aaKnown RBP13.46□□□□□ -0.25
FOXA3-202ENST00000594297 THAP5Q7Z6K1 395 aa13.46□□□□□ -0.25
FOXA3-202ENST00000594297 OR52E2Q8NGJ4 325 aa13.46□□□□□ -0.25
FOXA3-202ENST00000594297 OR4Q3Q8NH05 313 aa13.46□□□□□ -0.25
FOXA3-202ENST00000594297 OR6X1Q8NH79 312 aa13.46□□□□□ -0.25
FOXA3-202ENST00000594297 ABHD3Q8WU67 409 aa13.46□□□□□ -0.25
FOXA3-202ENST00000594297 HSD17B8Q92506 261 aa13.46□□□□□ -0.25
FOXA3-202ENST00000594297 KISS1RQ969F8 398 aaPredicted RBP13.46□□□□□ -0.25
FOXA3-202ENST00000594297 ZNF566Q969W8 418 aa13.46□□□□□ -0.25
FOXA3-202ENST00000594297 OTULINQ96BN8 352 aa13.46□□□□□ -0.25
FOXA3-202ENST00000594297 SLC25A44Q96H78 314 aaPredicted RBP13.46□□□□□ -0.25
FOXA3-202ENST00000594297 MUS81Q96NY9 551 aa13.46□□□□□ -0.25
FOXA3-202ENST00000594297 HDHD5Q9BXW7 423 aa13.46□□□□□ -0.25
FOXA3-202ENST00000594297 ANKRD60Q9BZ19 345 aa13.46□□□□□ -0.25
FOXA3-202ENST00000594297 FN3KQ9H479 309 aa13.46□□□□□ -0.25
FOXA3-202ENST00000594297 CHODLQ9H9P2 273 aa13.46□□□□□ -0.25
FOXA3-202ENST00000594297 B3GAT2Q9NPZ5 323 aa13.46□□□□□ -0.25
FOXA3-202ENST00000594297 CMC2Q9NRP2 79 aa13.46□□□□□ -0.25
FOXA3-202ENST00000594297 CLN6Q9NWW5 311 aa13.46□□□□□ -0.25
FOXA3-202ENST00000594297 RCE1Q9Y256 329 aa13.46□□□□□ -0.25
FOXA3-202ENST00000594297 NOSIPQ9Y314 301 aaKnown RBP13.46□□□□□ -0.25
FOXA3-202ENST00000594297 ADAM18Q9Y3Q7 739 aa13.46□□□□□ -0.25
FOXA3-202ENST00000594297 IGKV3D-15A0A087WSY6 115 aa13.45□□□□□ -0.26
FOXA3-202ENST00000594297 TEX13CA0A0J9YWL9 993 aa13.45□□□□□ -0.26
FOXA3-202ENST00000594297 PRR23D1E9PI22 279 aaPredicted RBP13.45□□□□□ -0.26
FOXA3-202ENST00000594297 SURF4O15260 269 aa13.45□□□□□ -0.26
FOXA3-202ENST00000594297 DENRO43583 198 aaKnown RBP13.45□□□□□ -0.26
FOXA3-202ENST00000594297 LMX1BO60663 402 aa13.45□□□□□ -0.26
FOXA3-202ENST00000594297 MRPL33O75394 65 aaKnown RBP13.45□□□□□ -0.26
FOXA3-202ENST00000594297 PRR23D2P0DMB1 279 aaPredicted RBP13.45□□□□□ -0.26
FOXA3-202ENST00000594297 EPHA2P29317 976 aa13.45□□□□□ -0.26
FOXA3-202ENST00000594297 CLRN1P58418 232 aa13.45□□□□□ -0.26
FOXA3-202ENST00000594297 DSCR9P59020 149 aa13.45□□□□□ -0.26
FOXA3-202ENST00000594297 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.45□□□□□ -0.26
FOXA3-202ENST00000594297 LGALS3BPQ08380 585 aa13.45□□□□□ -0.26
FOXA3-202ENST00000594297 DNM1P34Q6PK57 102 aa13.45□□□□□ -0.26
FOXA3-202ENST00000594297 TCEANCQ8N8B7 351 aa13.45□□□□□ -0.26
FOXA3-202ENST00000594297 TMEM163Q8TC26 289 aa13.45□□□□□ -0.26
FOXA3-202ENST00000594297 RFKQ969G6 155 aa13.45□□□□□ -0.26
FOXA3-202ENST00000594297 CNBD2Q96M20 576 aa13.45□□□□□ -0.26
FOXA3-202ENST00000594297 Q96M85 177 aa13.45□□□□□ -0.26
FOXA3-202ENST00000594297 TSPAN32Q96QS1 320 aa13.45□□□□□ -0.26
FOXA3-202ENST00000594297 SNX18Q96RF0 628 aa13.45□□□□□ -0.26
FOXA3-202ENST00000594297 ALG12Q9BV10 488 aa13.45□□□□□ -0.26
FOXA3-202ENST00000594297 BCO1Q9HAY6 547 aa13.45□□□□□ -0.26
FOXA3-202ENST00000594297 B3GAT1Q9P2W7 334 aa13.45□□□□□ -0.26
FOXA3-202ENST00000594297 SLC35F4A4IF30 521 aa13.44□□□□□ -0.26
FOXA3-202ENST00000594297 ZNF716A6NP11 495 aa13.44□□□□□ -0.26
FOXA3-202ENST00000594297 ZNF814B7Z6K7 855 aa13.44□□□□□ -0.26
FOXA3-202ENST00000594297 ABCD4O14678 606 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms