RNA–Protein interactions for RNA: ENST00000593026.1

DDX39A-221, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 657 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-221ENST00000593026 TMEM53Q6P2H8 277 aa13□□□□□ -0.33
DDX39A-221ENST00000593026 PIAS4Q8N2W9 510 aaPredicted RBP13□□□□□ -0.33
DDX39A-221ENST00000593026 CBR4Q8N4T8 237 aa13□□□□□ -0.33
DDX39A-221ENST00000593026 OR2T4Q8NH00 348 aa13□□□□□ -0.33
DDX39A-221ENST00000593026 FGFBP3Q8TAT2 258 aa13□□□□□ -0.33
DDX39A-221ENST00000593026 PLEKHA8Q96JA3 519 aa13□□□□□ -0.33
DDX39A-221ENST00000593026 KCNS3Q9BQ31 491 aa13□□□□□ -0.33
DDX39A-221ENST00000593026 C9orf16Q9BUW7 83 aa13□□□□□ -0.33
DDX39A-221ENST00000593026 FBXL3Q9UKT7 428 aa13□□□□□ -0.33
DDX39A-221ENST00000593026 C12orf71A8MTZ7 269 aa12.99□□□□□ -0.33
DDX39A-221ENST00000593026 SURF4O15260 269 aa12.99□□□□□ -0.33
DDX39A-221ENST00000593026 PLAUP00749 431 aa12.99□□□□□ -0.33
DDX39A-221ENST00000593026 ALPLP05186 524 aa12.99□□□□□ -0.33
DDX39A-221ENST00000593026 SCG5P05408 212 aa12.99□□□□□ -0.33
DDX39A-221ENST00000593026 CELA3BP08861 270 aa12.99□□□□□ -0.33
DDX39A-221ENST00000593026 CST2P09228 141 aa12.99□□□□□ -0.33
DDX39A-221ENST00000593026 CECR9P0C854 216 aa12.99□□□□□ -0.33
DDX39A-221ENST00000593026 PAICSP22234 425 aaKnown RBP12.99□□□□□ -0.33
DDX39A-221ENST00000593026 ELF3P78545 371 aaPredicted RBP12.99□□□□□ -0.33
DDX39A-221ENST00000593026 SPOCK1Q08629 439 aa12.99□□□□□ -0.33
DDX39A-221ENST00000593026 DBPQ10586 325 aaPredicted RBP12.99□□□□□ -0.33
DDX39A-221ENST00000593026 PTGES3Q15185 160 aaKnown RBP12.99□□□□□ -0.33
DDX39A-221ENST00000593026 SLC22A25Q6T423 547 aa12.99□□□□□ -0.33
DDX39A-221ENST00000593026 ZBTB46Q86UZ6 589 aa12.99□□□□□ -0.33
DDX39A-221ENST00000593026 DEPDC4Q8N2C3 294 aa12.99□□□□□ -0.33
DDX39A-221ENST00000593026 PROKR2Q8NFJ6 384 aa12.99□□□□□ -0.33
DDX39A-221ENST00000593026 KBTBD8Q8NFY9 601 aa12.99□□□□□ -0.33
DDX39A-221ENST00000593026 OR9Q1Q8NGQ5 310 aa12.99□□□□□ -0.33
DDX39A-221ENST00000593026 EME1Q96AY2 570 aa12.99□□□□□ -0.33
DDX39A-221ENST00000593026 RADILQ96JH8 1075 aa12.99□□□□□ -0.33
DDX39A-221ENST00000593026 DDOQ99489 341 aa12.99□□□□□ -0.33
DDX39A-221ENST00000593026 ZNF416Q9BWM5 594 aa12.99□□□□□ -0.33
DDX39A-221ENST00000593026 PRRG3Q9BZD7 231 aa12.99□□□□□ -0.33
DDX39A-221ENST00000593026 EMC7Q9NPA0 242 aa12.99□□□□□ -0.33
DDX39A-221ENST00000593026 USE1Q9NZ43 259 aa12.99□□□□□ -0.33
DDX39A-221ENST00000593026 ORC6Q9Y5N6 252 aa12.99□□□□□ -0.33
DDX39A-221ENST00000593026 FBN2P35556 2912 aa12.99□□□□□ -0.33
DDX39A-221ENST00000593026 FAM171A2A8MVW0 826 aa12.98□□□□□ -0.33
DDX39A-221ENST00000593026 MPZL1O95297 269 aa12.98□□□□□ -0.33
DDX39A-221ENST00000593026 CRYAAP02489 173 aa12.98□□□□□ -0.33
DDX39A-221ENST00000593026 MMP7P09237 267 aaPredicted RBP12.98□□□□□ -0.33
DDX39A-221ENST00000593026 GAAP10253 952 aa12.98□□□□□ -0.33
DDX39A-221ENST00000593026 ANPEPP15144 967 aa12.98□□□□□ -0.33
DDX39A-221ENST00000593026 ZNF14P17017 642 aaPredicted RBP12.98□□□□□ -0.33
DDX39A-221ENST00000593026 ZNF32P17041 273 aa12.98□□□□□ -0.33
DDX39A-221ENST00000593026 PYCR1P32322 319 aa12.98□□□□□ -0.33
DDX39A-221ENST00000593026 ALDH3A2P51648 485 aa12.98□□□□□ -0.33
DDX39A-221ENST00000593026 SLC25A1P53007 311 aa12.98□□□□□ -0.33
DDX39A-221ENST00000593026 PCBD1P61457 104 aa12.98□□□□□ -0.33
DDX39A-221ENST00000593026 NAAAQ02083 359 aa12.98□□□□□ -0.33
DDX39A-221ENST00000593026 PLP2Q04941 152 aa12.98□□□□□ -0.33
DDX39A-221ENST00000593026 ENDOGQ14249 297 aaKnown RBP12.98□□□□□ -0.33
DDX39A-221ENST00000593026 RAB39AQ14964 217 aa12.98□□□□□ -0.33
DDX39A-221ENST00000593026 UGT2A3Q6UWM9 527 aa12.98□□□□□ -0.33
DDX39A-221ENST00000593026 MYPOPQ86VE0 399 aaPredicted RBP12.98□□□□□ -0.33
DDX39A-221ENST00000593026 C11orf40Q8WZ69 217 aa12.98□□□□□ -0.33
DDX39A-221ENST00000593026 OTULINQ96BN8 352 aa12.98□□□□□ -0.33
DDX39A-221ENST00000593026 FBXO17Q96EF6 278 aa12.98□□□□□ -0.33
DDX39A-221ENST00000593026 MS4A3Q96HJ5 214 aa12.98□□□□□ -0.33
DDX39A-221ENST00000593026 LURAP1Q96LR2 239 aa12.98□□□□□ -0.33
DDX39A-221ENST00000593026 ZNF75AQ96N20 296 aa12.98□□□□□ -0.33
DDX39A-221ENST00000593026 GABARAPL3Q9BY60 117 aa12.98□□□□□ -0.33
DDX39A-221ENST00000593026 NMNAT2Q9BZQ4 307 aa12.98□□□□□ -0.33
DDX39A-221ENST00000593026 RIBC2Q9H4K1 309 aa12.98□□□□□ -0.33
DDX39A-221ENST00000593026 PLEKHF2Q9H8W4 249 aa12.98□□□□□ -0.33
DDX39A-221ENST00000593026 UBTD1Q9HAC8 227 aa12.98□□□□□ -0.33
DDX39A-221ENST00000593026 POU2F3Q9UKI9 436 aa12.98□□□□□ -0.33
DDX39A-221ENST00000593026 MOKQ9UQ07 419 aa12.98□□□□□ -0.33
DDX39A-221ENST00000593026 POLR1DQ9Y2S0 133 aa12.98□□□□□ -0.33
DDX39A-221ENST00000593026 TEX15Q9BXT5 2789 aa12.97□□□□□ -0.33
DDX39A-221ENST00000593026 IQCMA0A1B0GVH7 501 aa12.97□□□□□ -0.33
DDX39A-221ENST00000593026 FAM183AA6NL82 134 aa12.97□□□□□ -0.33
DDX39A-221ENST00000593026 ZAR1LA6NP61 321 aa12.97□□□□□ -0.33
DDX39A-221ENST00000593026 SHISA9B4DS77 424 aa12.97□□□□□ -0.33
DDX39A-221ENST00000593026 PRR23D1E9PI22 279 aaPredicted RBP12.97□□□□□ -0.33
DDX39A-221ENST00000593026 ATP6V1G2-DDX39BF2Z307 99 aa12.97□□□□□ -0.33
DDX39A-221ENST00000593026 GPANK1O95872 356 aa12.97□□□□□ -0.33
DDX39A-221ENST00000593026 HLA-DQA2P01906 255 aa12.97□□□□□ -0.33
DDX39A-221ENST00000593026 SERPINA5P05154 406 aa12.97□□□□□ -0.33
DDX39A-221ENST00000593026 PRR23D2P0DMB1 279 aaPredicted RBP12.97□□□□□ -0.33
DDX39A-221ENST00000593026 SPI1P17947 270 aa12.97□□□□□ -0.33
DDX39A-221ENST00000593026 EPHA2P29317 976 aa12.97□□□□□ -0.33
DDX39A-221ENST00000593026 RAD23AP54725 363 aa12.97□□□□□ -0.33
DDX39A-221ENST00000593026 LSM6P62312 80 aaKnown RBP12.97□□□□□ -0.33
DDX39A-221ENST00000593026 HSF2Q03933 536 aa12.97□□□□□ -0.33
DDX39A-221ENST00000593026 AQP6Q13520 282 aa12.97□□□□□ -0.33
DDX39A-221ENST00000593026 SNAPC1Q16533 368 aa12.97□□□□□ -0.33
DDX39A-221ENST00000593026 KCNMB1Q16558 191 aa12.97□□□□□ -0.33
DDX39A-221ENST00000593026 SLX4IPQ5VYV7 408 aa12.97□□□□□ -0.33
DDX39A-221ENST00000593026 OTPQ5XKR4 325 aa12.97□□□□□ -0.33
DDX39A-221ENST00000593026 ZBTB49Q6ZSB9 765 aa12.97□□□□□ -0.33
DDX39A-221ENST00000593026 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.97□□□□□ -0.33
DDX39A-221ENST00000593026 SYT9Q86SS6 491 aa12.97□□□□□ -0.33
DDX39A-221ENST00000593026 IL17RDQ8NFM7 739 aa12.97□□□□□ -0.33
DDX39A-221ENST00000593026 SLC26A10Q8NG04 563 aa12.97□□□□□ -0.33
DDX39A-221ENST00000593026 OR10H5Q8NGA6 315 aa12.97□□□□□ -0.33
DDX39A-221ENST00000593026 AKAP1Q92667 903 aaKnown RBP eCLIP12.97□□□□□ -0.33
DDX39A-221ENST00000593026 WACQ9BTA9 647 aa12.97□□□□□ -0.33
DDX39A-221ENST00000593026 C1orf198Q9H425 327 aa12.97□□□□□ -0.33
DDX39A-221ENST00000593026 MED20Q9H944 212 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms