RNA–Protein interactions for RNA: ENST00000592535.5

APOC1-208, Transcript of apolipoprotein C1, humanhuman

TSL 1 (best)

Gene APOC1, Length 430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-208ENST00000592535 NAT2P11245 290 aa11.9□□□□□ -0.5
APOC1-208ENST00000592535 HSD17B1P14061 328 aa11.9□□□□□ -0.5
APOC1-208ENST00000592535 ZNF23P17027 643 aa11.9□□□□□ -0.5
APOC1-208ENST00000592535 CCNOP22674 350 aa11.9□□□□□ -0.5
APOC1-208ENST00000592535 LAP3P28838 519 aa11.9□□□□□ -0.5
APOC1-208ENST00000592535 LIMS1P48059 325 aa11.9□□□□□ -0.5
APOC1-208ENST00000592535 GZMKP49863 264 aa11.9□□□□□ -0.5
APOC1-208ENST00000592535 UCP2P55851 309 aa11.9□□□□□ -0.5
APOC1-208ENST00000592535 PSG4Q00888 419 aa11.9□□□□□ -0.5
APOC1-208ENST00000592535 SEC23BQ15437 767 aa11.9□□□□□ -0.5
APOC1-208ENST00000592535 ALKBH6Q3KRA9 238 aa11.9□□□□□ -0.5
APOC1-208ENST00000592535 MESTQ5EB52 335 aa11.9□□□□□ -0.5
APOC1-208ENST00000592535 FAM27BQ5VT28 67 aa11.9□□□□□ -0.5
APOC1-208ENST00000592535 FAM122BQ7Z309 247 aa11.9□□□□□ -0.5
APOC1-208ENST00000592535 ICA1LQ8NDH6 482 aa11.9□□□□□ -0.5
APOC1-208ENST00000592535 ZNF540Q8NDQ6 660 aa11.9□□□□□ -0.5
APOC1-208ENST00000592535 Q96M85 177 aa11.9□□□□□ -0.5
APOC1-208ENST00000592535 LRRC37BQ96QE4 947 aa11.9□□□□□ -0.5
APOC1-208ENST00000592535 LRMDAQ9H2I8 198 aa11.9□□□□□ -0.5
APOC1-208ENST00000592535 GORASP2Q9H8Y8 452 aa11.9□□□□□ -0.5
APOC1-208ENST00000592535 GRHPRQ9UBQ7 328 aa11.9□□□□□ -0.5
APOC1-208ENST00000592535 CD300AQ9UGN4 299 aa11.9□□□□□ -0.5
APOC1-208ENST00000592535 MAGEL2Q9UJ55 1249 aa11.9□□□□□ -0.5
APOC1-208ENST00000592535 IGLV3-9A0A075B6K5 115 aa11.89□□□□□ -0.51
APOC1-208ENST00000592535 LRP5LA4QPB2 252 aa11.89□□□□□ -0.51
APOC1-208ENST00000592535 PTP4A3O75365 173 aa11.89□□□□□ -0.51
APOC1-208ENST00000592535 HPXP02790 462 aa11.89□□□□□ -0.51
APOC1-208ENST00000592535 SEMG1P04279 462 aa11.89□□□□□ -0.51
APOC1-208ENST00000592535 SCG5P05408 212 aa11.89□□□□□ -0.51
APOC1-208ENST00000592535 CST2P09228 141 aa11.89□□□□□ -0.51
APOC1-208ENST00000592535 STOMP27105 288 aa11.89□□□□□ -0.51
APOC1-208ENST00000592535 RAD52P43351 418 aa11.89□□□□□ -0.51
APOC1-208ENST00000592535 OMPP47874 163 aa11.89□□□□□ -0.51
APOC1-208ENST00000592535 KLF3P57682 345 aaPredicted RBP11.89□□□□□ -0.51
APOC1-208ENST00000592535 ENDOGQ14249 297 aaKnown RBP11.89□□□□□ -0.51
APOC1-208ENST00000592535 CHRFAM7AQ494W8 412 aa11.89□□□□□ -0.51
APOC1-208ENST00000592535 ELFN2Q5R3F8 820 aa11.89□□□□□ -0.51
APOC1-208ENST00000592535 OR52J3Q8NH60 311 aa11.89□□□□□ -0.51
APOC1-208ENST00000592535 SYNPRQ8TBG9 265 aa11.89□□□□□ -0.51
APOC1-208ENST00000592535 RASD2Q96D21 266 aa11.89□□□□□ -0.51
APOC1-208ENST00000592535 MSI2Q96DH6 328 aaKnown RBP11.89□□□□□ -0.51
APOC1-208ENST00000592535 PYURFQ96I23 114 aa11.89□□□□□ -0.51
APOC1-208ENST00000592535 RSRC1Q96IZ7 334 aaKnown RBP11.89□□□□□ -0.51
APOC1-208ENST00000592535 POM121L2Q96KW2 1035 aa11.89□□□□□ -0.51
APOC1-208ENST00000592535 DHRS1Q96LJ7 313 aa11.89□□□□□ -0.51
APOC1-208ENST00000592535 ZNF570Q96NI8 536 aa11.89□□□□□ -0.51
APOC1-208ENST00000592535 CCT8L2Q96SF2 557 aa11.89□□□□□ -0.51
APOC1-208ENST00000592535 CDRT15Q96T59 188 aa11.89□□□□□ -0.51
APOC1-208ENST00000592535 FUZQ9BT04 418 aa11.89□□□□□ -0.51
APOC1-208ENST00000592535 SOX7Q9BT81 388 aa11.89□□□□□ -0.51
APOC1-208ENST00000592535 BCL2L14Q9BZR8 327 aa11.89□□□□□ -0.51
APOC1-208ENST00000592535 OR2H1Q9GZK4 316 aa11.89□□□□□ -0.51
APOC1-208ENST00000592535 WNT5BQ9H1J7 359 aa11.89□□□□□ -0.51
APOC1-208ENST00000592535 TAAR3PQ9P1P4 343 aa11.89□□□□□ -0.51
APOC1-208ENST00000592535 SIGLEC7Q9Y286 467 aa11.89□□□□□ -0.51
APOC1-208ENST00000592535 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.89□□□□□ -0.512e-32■■■■■ 32.6
APOC1-208ENST00000592535 LOC100509620A0A075B734 347 aa11.88□□□□□ -0.51
APOC1-208ENST00000592535 TEX13CA0A0J9YWL9 993 aa11.88□□□□□ -0.51
APOC1-208ENST00000592535 C5orf49A4QMS7 147 aa11.88□□□□□ -0.51
APOC1-208ENST00000592535 XKRYO14609 159 aa11.88□□□□□ -0.51
APOC1-208ENST00000592535 ARPC2O15144 300 aa11.88□□□□□ -0.51
APOC1-208ENST00000592535 LILRA1O75019 489 aa11.88□□□□□ -0.51
APOC1-208ENST00000592535 DCTN3O75935 186 aa11.88□□□□□ -0.51
APOC1-208ENST00000592535 NCR1O76036 304 aa11.88□□□□□ -0.51
APOC1-208ENST00000592535 NDUFB2O95178 105 aa11.88□□□□□ -0.51
APOC1-208ENST00000592535 FAM107AO95990 144 aa11.88□□□□□ -0.51
APOC1-208ENST00000592535 ZNF250P15622 560 aa11.88□□□□□ -0.51
APOC1-208ENST00000592535 MSR1P21757 451 aa11.88□□□□□ -0.51
APOC1-208ENST00000592535 IL2RGP31785 369 aa11.88□□□□□ -0.51
APOC1-208ENST00000592535 WNT5AP41221 380 aa11.88□□□□□ -0.51
APOC1-208ENST00000592535 FXYD6P3P58550 94 aa11.88□□□□□ -0.51
APOC1-208ENST00000592535 RIN1Q13671 783 aa11.88□□□□□ -0.51
APOC1-208ENST00000592535 KRT72Q14CN4 511 aa11.88□□□□□ -0.51
APOC1-208ENST00000592535 TRIP10Q15642 601 aa11.88□□□□□ -0.51
APOC1-208ENST00000592535 NKPD1Q17RQ9 610 aa11.88□□□□□ -0.51
APOC1-208ENST00000592535 SAMD4BQ5PRF9 694 aaKnown RBP11.88□□□□□ -0.51
APOC1-208ENST00000592535 UGT2A3Q6UWM9 527 aa11.88□□□□□ -0.51
APOC1-208ENST00000592535 THSD4Q6ZMP0 1018 aa11.88□□□□□ -0.51
APOC1-208ENST00000592535 ZNF101Q8IZC7 436 aa11.88□□□□□ -0.51
APOC1-208ENST00000592535 OR1J1Q8NGS3 322 aa11.88□□□□□ -0.51
APOC1-208ENST00000592535 C11orf40Q8WZ69 217 aa11.88□□□□□ -0.51
APOC1-208ENST00000592535 NSMCE2Q96MF7 247 aa11.88□□□□□ -0.51
APOC1-208ENST00000592535 GPA33Q99795 319 aa11.88□□□□□ -0.51
APOC1-208ENST00000592535 ZNF416Q9BWM5 594 aa11.88□□□□□ -0.51
APOC1-208ENST00000592535 NDEL1Q9GZM8 345 aa11.88□□□□□ -0.51
APOC1-208ENST00000592535 EMC7Q9NPA0 242 aa11.88□□□□□ -0.51
APOC1-208ENST00000592535 NRIP3Q9NQ35 241 aa11.88□□□□□ -0.51
APOC1-208ENST00000592535 POLE4Q9NR33 117 aa11.88□□□□□ -0.51
APOC1-208ENST00000592535 TMEM160Q9NX00 188 aa11.88□□□□□ -0.51
APOC1-208ENST00000592535 IL20RAQ9UHF4 553 aa11.88□□□□□ -0.51
APOC1-208ENST00000592535 AURKCQ9UQB9 309 aa11.88□□□□□ -0.51
APOC1-208ENST00000592535 LOC100289279A0A1B0GTE1 492 aa11.87□□□□□ -0.51
APOC1-208ENST00000592535 PRSS37A4D1T9 235 aa11.87□□□□□ -0.51
APOC1-208ENST00000592535 UNC119BA6NIH7 251 aa11.87□□□□□ -0.51
APOC1-208ENST00000592535 IMPA2O14732 288 aa11.87□□□□□ -0.51
APOC1-208ENST00000592535 LMX1BO60663 402 aa11.87□□□□□ -0.51
APOC1-208ENST00000592535 TACSTD2P09758 323 aa11.87□□□□□ -0.51
APOC1-208ENST00000592535 CTLA4P16410 223 aa11.87□□□□□ -0.51
APOC1-208ENST00000592535 ITGA2P17301 1181 aa11.87□□□□□ -0.51
APOC1-208ENST00000592535 IGFBP5P24593 272 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms