RNA–Protein interactions for RNA: ENST00000591849.5

BRCA1-227, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-227ENST00000591849 IMPA2O14732 288 aa8.72□□□□□ -1.01
BRCA1-227ENST00000591849 SMAD7O15105 426 aaKnown RBP8.72□□□□□ -1.01
BRCA1-227ENST00000591849 IDH3BO43837 385 aa8.72□□□□□ -1.01
BRCA1-227ENST00000591849 CIB2O75838 187 aa8.72□□□□□ -1.01
BRCA1-227ENST00000591849 GASTP01350 101 aa8.72□□□□□ -1.01
BRCA1-227ENST00000591849 LCKP06239 509 aa8.72□□□□□ -1.01
BRCA1-227ENST00000591849 CST2P09228 141 aa8.72□□□□□ -1.01
BRCA1-227ENST00000591849 APEHP13798 732 aaKnown RBP8.72□□□□□ -1.01
BRCA1-227ENST00000591849 ZNF26P17031 533 aaPredicted RBP8.72□□□□□ -1.01
BRCA1-227ENST00000591849 ZNF32P17041 273 aa8.72□□□□□ -1.01
BRCA1-227ENST00000591849 MSR1P21757 451 aa8.72□□□□□ -1.01
BRCA1-227ENST00000591849 LAP3P28838 519 aa8.72□□□□□ -1.01
BRCA1-227ENST00000591849 CRABP1P29762 137 aa8.72□□□□□ -1.01
BRCA1-227ENST00000591849 MAGEA2P43356 314 aa8.72□□□□□ -1.01
BRCA1-227ENST00000591849 GSSP48637 474 aa8.72□□□□□ -1.01
BRCA1-227ENST00000591849 GDI2P50395 445 aaKnown RBP8.72□□□□□ -1.01
BRCA1-227ENST00000591849 ERFP50548 548 aa8.72□□□□□ -1.01
BRCA1-227ENST00000591849 ARHGDIAP52565 204 aa8.72□□□□□ -1.01
BRCA1-227ENST00000591849 ADIPOQQ15848 244 aa8.72□□□□□ -1.01
BRCA1-227ENST00000591849 ETFDHQ16134 617 aa8.72□□□□□ -1.01
BRCA1-227ENST00000591849 CARTPTQ16568 116 aa8.72□□□□□ -1.01
BRCA1-227ENST00000591849 MICAQ29983 383 aa8.72□□□□□ -1.01
BRCA1-227ENST00000591849 MESTQ5EB52 335 aa8.72□□□□□ -1.01
BRCA1-227ENST00000591849 PABPC1L2AQ5JQF8 200 aa8.72□□□□□ -1.01
BRCA1-227ENST00000591849 CLEC12AQ5QGZ9 265 aa8.72□□□□□ -1.01
BRCA1-227ENST00000591849 LEG1Q6P5S2 330 aa8.72□□□□□ -1.01
BRCA1-227ENST00000591849 PGM2L1Q6PCE3 622 aa8.72□□□□□ -1.01
BRCA1-227ENST00000591849 THSD4Q6ZMP0 1018 aa8.72□□□□□ -1.01
BRCA1-227ENST00000591849 FAM122BQ7Z309 247 aa8.72□□□□□ -1.01
BRCA1-227ENST00000591849 ZSCAN2Q7Z7L9 614 aaPredicted RBP8.72□□□□□ -1.01
BRCA1-227ENST00000591849 MYPOPQ86VE0 399 aaPredicted RBP8.72□□□□□ -1.01
BRCA1-227ENST00000591849 ADGRG5Q8IZF4 528 aa8.72□□□□□ -1.01
BRCA1-227ENST00000591849 OR4K13Q8NH42 304 aa8.72□□□□□ -1.01
BRCA1-227ENST00000591849 GIPC3Q8TF64 312 aa8.72□□□□□ -1.01
BRCA1-227ENST00000591849 CANT1Q8WVQ1 401 aa8.72□□□□□ -1.01
BRCA1-227ENST00000591849 IGFBPL1Q8WX77 278 aa8.72□□□□□ -1.01
BRCA1-227ENST00000591849 NMD3Q96D46 503 aaKnown RBP8.72□□□□□ -1.01
BRCA1-227ENST00000591849 FOXN4Q96NZ1 517 aa8.72□□□□□ -1.01
BRCA1-227ENST00000591849 GPX7Q96SL4 187 aaPredicted RBP8.72□□□□□ -1.01
BRCA1-227ENST00000591849 RHNO1Q9BSD3 238 aa8.72□□□□□ -1.01
BRCA1-227ENST00000591849 TMUB1Q9BVT8 246 aa8.72□□□□□ -1.01
BRCA1-227ENST00000591849 CADM1Q9BY67 442 aaKnown RBP8.72□□□□□ -1.01
BRCA1-227ENST00000591849 SYT4Q9H2B2 425 aa8.72□□□□□ -1.01
BRCA1-227ENST00000591849 OR51B6Q9H340 312 aa8.72□□□□□ -1.01
BRCA1-227ENST00000591849 PLK3Q9H4B4 646 aa8.72□□□□□ -1.01
BRCA1-227ENST00000591849 ZNF442Q9H7R0 627 aa8.72□□□□□ -1.01
BRCA1-227ENST00000591849 SRA1Q9HD15 236 aaKnown RBP8.72□□□□□ -1.01
BRCA1-227ENST00000591849 TBC1D23Q9NUY8 699 aa8.72□□□□□ -1.01
BRCA1-227ENST00000591849 ZNF224Q9NZL3 707 aa8.72□□□□□ -1.01
BRCA1-227ENST00000591849 SLC7A8Q9UHI5 535 aa8.72□□□□□ -1.01
BRCA1-227ENST00000591849 GDF2Q9UK05 429 aaPredicted RBP8.72□□□□□ -1.01
BRCA1-227ENST00000591849 POMPQ9Y244 141 aa8.72□□□□□ -1.01
BRCA1-227ENST00000591849 UGT2A1Q9Y4X1 527 aa8.72□□□□□ -1.01
BRCA1-227ENST00000591849 FKBP7Q9Y680 259 aa8.72□□□□□ -1.01
BRCA1-227ENST00000591849 USF3Q68DE3 2245 aa8.72□□□□□ -1.01
BRCA1-227ENST00000591849 TRIM64A6NGJ6 449 aa8.71□□□□□ -1.02
BRCA1-227ENST00000591849 TRIM64BA6NI03 449 aa8.71□□□□□ -1.02
BRCA1-227ENST00000591849 NDUFS7O75251 213 aa8.71□□□□□ -1.02
BRCA1-227ENST00000591849 TXNDC12O95881 172 aa8.71□□□□□ -1.02
BRCA1-227ENST00000591849 HLA-DQA2P01906 255 aa8.71□□□□□ -1.02
BRCA1-227ENST00000591849 INHBBP09529 407 aa8.71□□□□□ -1.02
BRCA1-227ENST00000591849 FAM157BP0CG42 384 aa8.71□□□□□ -1.02
BRCA1-227ENST00000591849 CCL2P13500 99 aa8.71□□□□□ -1.02
BRCA1-227ENST00000591849 FOSL1P15407 271 aa8.71□□□□□ -1.02
BRCA1-227ENST00000591849 GSTM3P21266 225 aa8.71□□□□□ -1.02
BRCA1-227ENST00000591849 STOMP27105 288 aa8.71□□□□□ -1.02
BRCA1-227ENST00000591849 APEX1P27695 318 aaKnown RBP8.71□□□□□ -1.02
BRCA1-227ENST00000591849 GLRXP35754 106 aa8.71□□□□□ -1.02
BRCA1-227ENST00000591849 CDKN2AP42771 156 aaKnown RBP8.71□□□□□ -1.02
BRCA1-227ENST00000591849 RAD52P43351 418 aa8.71□□□□□ -1.02
BRCA1-227ENST00000591849 CBX1P83916 185 aa8.71□□□□□ -1.02
BRCA1-227ENST00000591849 SCRN3Q0VDG4 424 aa8.71□□□□□ -1.02
BRCA1-227ENST00000591849 GK3PQ14409 553 aa8.71□□□□□ -1.02
BRCA1-227ENST00000591849 SLC35F1Q5T1Q4 408 aa8.71□□□□□ -1.02
BRCA1-227ENST00000591849 C11orf71Q6IPW1 123 aa8.71□□□□□ -1.02
BRCA1-227ENST00000591849 ARL9Q6T311 187 aa8.71□□□□□ -1.02
BRCA1-227ENST00000591849 CLEC2AQ6UVW9 174 aa8.71□□□□□ -1.02
BRCA1-227ENST00000591849 UNQ6126/PRO20091Q6UXV3 157 aa8.71□□□□□ -1.02
BRCA1-227ENST00000591849 ZNF620Q6ZNG0 422 aa8.71□□□□□ -1.02
BRCA1-227ENST00000591849 CCDC121Q6ZUS5 278 aa8.71□□□□□ -1.02
BRCA1-227ENST00000591849 GLB1L2Q8IW92 636 aa8.71□□□□□ -1.02
BRCA1-227ENST00000591849 SVOPLQ8N434 492 aa8.71□□□□□ -1.02
BRCA1-227ENST00000591849 OR10H5Q8NGA6 315 aa8.71□□□□□ -1.02
BRCA1-227ENST00000591849 OR10G2Q8NGC3 310 aa8.71□□□□□ -1.02
BRCA1-227ENST00000591849 OR52E2Q8NGJ4 325 aa8.71□□□□□ -1.02
BRCA1-227ENST00000591849 OR4C15Q8NGM1 316 aa8.71□□□□□ -1.02
BRCA1-227ENST00000591849 AKR7LQ8NHP1 331 aa8.71□□□□□ -1.02
BRCA1-227ENST00000591849 C11orf40Q8WZ69 217 aa8.71□□□□□ -1.02
BRCA1-227ENST00000591849 C18orf12Q96KH6 178 aa8.71□□□□□ -1.02
BRCA1-227ENST00000591849 TSSK6Q9BXA6 273 aa8.71□□□□□ -1.02
BRCA1-227ENST00000591849 NUAK2Q9H093 628 aa8.71□□□□□ -1.02
BRCA1-227ENST00000591849 RAB1BQ9H0U4 201 aa8.71□□□□□ -1.02
BRCA1-227ENST00000591849 MMADHCQ9H3L0 296 aaPredicted RBP8.71□□□□□ -1.02
BRCA1-227ENST00000591849 EGLN3Q9H6Z9 239 aa8.71□□□□□ -1.02
BRCA1-227ENST00000591849 ZNF556Q9HAH1 456 aa8.71□□□□□ -1.02
BRCA1-227ENST00000591849 EMC7Q9NPA0 242 aa8.71□□□□□ -1.02
BRCA1-227ENST00000591849 POLE4Q9NR33 117 aa8.71□□□□□ -1.02
BRCA1-227ENST00000591849 VSX1Q9NZR4 365 aaPredicted RBP8.71□□□□□ -1.02
BRCA1-227ENST00000591849 DUSP13Q9UII6 198 aa8.71□□□□□ -1.02
BRCA1-227ENST00000591849 GPR160Q9UJ42 338 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms