RNA–Protein interactions for RNA: ENST00000588780.5

CAPNS1-205, Transcript of calpain small subunit 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CAPNS1, Length 1,035 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-205ENST00000588780 TAF11Q15544 211 aa18.25■□□□□ 0.51
CAPNS1-205ENST00000588780 NRN1LQ496H8 165 aa18.25■□□□□ 0.51
CAPNS1-205ENST00000588780 Q6YL49 198 aa18.25■□□□□ 0.51
CAPNS1-205ENST00000588780 ZNF620Q6ZNG0 422 aa18.25■□□□□ 0.51
CAPNS1-205ENST00000588780 RFPL4BQ6ZWI9 263 aa18.25■□□□□ 0.51
CAPNS1-205ENST00000588780 HIST3H2AQ7L7L0 130 aa18.25■□□□□ 0.51
CAPNS1-205ENST00000588780 ZER1Q7Z7L7 766 aa18.25■□□□□ 0.51
CAPNS1-205ENST00000588780 COMTD1Q86VU5 262 aa18.25■□□□□ 0.51
CAPNS1-205ENST00000588780 POU5F2Q8N7G0 328 aa18.25■□□□□ 0.51
CAPNS1-205ENST00000588780 HIST1H2ACQ93077 130 aa18.25■□□□□ 0.51
CAPNS1-205ENST00000588780 PLEKHA8Q96JA3 519 aa18.25■□□□□ 0.51
CAPNS1-205ENST00000588780 POM121L2Q96KW2 1035 aa18.25■□□□□ 0.51
CAPNS1-205ENST00000588780 SAMD8Q96LT4 415 aa18.25■□□□□ 0.51
CAPNS1-205ENST00000588780 RAD21L1Q9H4I0 556 aa18.25■□□□□ 0.51
CAPNS1-205ENST00000588780 MEAF6Q9HAF1 191 aa18.25■□□□□ 0.51
CAPNS1-205ENST00000588780 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP18.25■□□□□ 0.51
CAPNS1-205ENST00000588780 CH25HO95992 272 aa18.24■□□□□ 0.51
CAPNS1-205ENST00000588780 WNT2P09544 360 aa18.24■□□□□ 0.51
CAPNS1-205ENST00000588780 UMPSP11172 480 aa18.24■□□□□ 0.51
CAPNS1-205ENST00000588780 ZNF32P17041 273 aa18.24■□□□□ 0.51
CAPNS1-205ENST00000588780 RGNQ15493 299 aa18.24■□□□□ 0.51
CAPNS1-205ENST00000588780 SGCAQ16586 387 aa18.24■□□□□ 0.51
CAPNS1-205ENST00000588780 C2orf68Q2NKX9 166 aa18.24■□□□□ 0.51
CAPNS1-205ENST00000588780 RANBP3LQ86VV4 465 aaPredicted RBP18.24■□□□□ 0.51
CAPNS1-205ENST00000588780 C1orf174Q8IYL3 243 aa18.24■□□□□ 0.51
CAPNS1-205ENST00000588780 KIRREL3Q8IZU9 778 aa18.24■□□□□ 0.51
CAPNS1-205ENST00000588780 NFKBIDQ8NI38 313 aa18.24■□□□□ 0.51
CAPNS1-205ENST00000588780 C20orf27Q9GZN8 174 aa18.24■□□□□ 0.51
CAPNS1-205ENST00000588780 NANSQ9NR45 359 aa18.24■□□□□ 0.51
CAPNS1-205ENST00000588780 NIPSNAP3AQ9UFN0 247 aaPredicted RBP18.24■□□□□ 0.51
CAPNS1-205ENST00000588780 LOC100509620A0A075B734 347 aa18.23■□□□□ 0.51
CAPNS1-205ENST00000588780 TPST1O60507 370 aa18.23■□□□□ 0.51
CAPNS1-205ENST00000588780 SLC22A3O75751 556 aa18.23■□□□□ 0.51
CAPNS1-205ENST00000588780 ZNF205O95201 554 aa18.23■□□□□ 0.51
CAPNS1-205ENST00000588780 CDAP32320 146 aa18.23■□□□□ 0.51
CAPNS1-205ENST00000588780 CDK5R2Q13319 367 aa18.23■□□□□ 0.51
CAPNS1-205ENST00000588780 NXNQ6DKJ4 435 aa18.23■□□□□ 0.51
CAPNS1-205ENST00000588780 DHRS4L2Q6PKH6 230 aa18.23■□□□□ 0.51
CAPNS1-205ENST00000588780 TMEM86BQ8N661 226 aa18.23■□□□□ 0.51
CAPNS1-205ENST00000588780 ITLN1Q8WWA0 313 aa18.23■□□□□ 0.51
CAPNS1-205ENST00000588780 FAM71F1Q96KD3 344 aaPredicted RBP18.23■□□□□ 0.51
CAPNS1-205ENST00000588780 RSPO3Q9BXY4 272 aaPredicted RBP18.23■□□□□ 0.51
CAPNS1-205ENST00000588780 SIAEQ9HAT2 523 aa18.23■□□□□ 0.51
CAPNS1-205ENST00000588780 ELOVL3Q9HB03 270 aa18.23■□□□□ 0.51
CAPNS1-205ENST00000588780 PNPOQ9NVS9 261 aa18.23■□□□□ 0.51
CAPNS1-205ENST00000588780 TAS2R5Q9NYW4 299 aa18.23■□□□□ 0.51
CAPNS1-205ENST00000588780 KIF17Q9P2E2 1029 aa18.23■□□□□ 0.51
CAPNS1-205ENST00000588780 KLHL21Q9UJP4 597 aa18.23■□□□□ 0.51
CAPNS1-205ENST00000588780 G3V4G9 280 aa18.22■□□□□ 0.51
CAPNS1-205ENST00000588780 SURF4O15260 269 aa18.22■□□□□ 0.51
CAPNS1-205ENST00000588780 MELTFP08582 738 aa18.22■□□□□ 0.51
CAPNS1-205ENST00000588780 CSF1P09603 554 aa18.22■□□□□ 0.51
CAPNS1-205ENST00000588780 ERVK-25P63136 954 aa18.22■□□□□ 0.51
CAPNS1-205ENST00000588780 FAM189A2Q15884 450 aa18.22■□□□□ 0.51
CAPNS1-205ENST00000588780 RUSC1-AS1Q66K80 236 aa18.22■□□□□ 0.51
CAPNS1-205ENST00000588780 KLBQ86Z14 1044 aa18.22■□□□□ 0.51
CAPNS1-205ENST00000588780 ALDH16A1Q8IZ83 802 aa18.22■□□□□ 0.51
CAPNS1-205ENST00000588780 NOXO1Q8NFA2 376 aa18.22■□□□□ 0.51
CAPNS1-205ENST00000588780 LINC01006Q8NI28 216 aa18.22■□□□□ 0.51
CAPNS1-205ENST00000588780 SORT1Q99523 831 aa18.22■□□□□ 0.51
CAPNS1-205ENST00000588780 NUDT16L1Q9BRJ7 211 aaKnown RBP18.22■□□□□ 0.51
CAPNS1-205ENST00000588780 PRDM13Q9H4Q3 707 aa18.22■□□□□ 0.51
CAPNS1-205ENST00000588780 H3BSA7 217 aa18.21■□□□□ 0.51
CAPNS1-205ENST00000588780 CLIC1O00299 241 aa18.21■□□□□ 0.51
CAPNS1-205ENST00000588780 KPNA4O00629 521 aaPredicted RBP18.21■□□□□ 0.51
CAPNS1-205ENST00000588780 MGRN1O60291 552 aa18.21■□□□□ 0.51
CAPNS1-205ENST00000588780 GSTM3P21266 225 aa18.21■□□□□ 0.51
CAPNS1-205ENST00000588780 ETV4P43268 484 aa18.21■□□□□ 0.51
CAPNS1-205ENST00000588780 PCBP3P57721 371 aaKnown RBP18.21■□□□□ 0.51
CAPNS1-205ENST00000588780 FGF12P61328 243 aa18.21■□□□□ 0.51
CAPNS1-205ENST00000588780 PAX2Q02962 417 aa18.21■□□□□ 0.51
CAPNS1-205ENST00000588780 RUNDC3AQ59EK9 446 aa18.21■□□□□ 0.51
CAPNS1-205ENST00000588780 SWT1Q5T5J6 900 aaKnown RBP18.21■□□□□ 0.51
CAPNS1-205ENST00000588780 HHATQ5VTY9 493 aa18.21■□□□□ 0.51
CAPNS1-205ENST00000588780 SLC27A4Q6P1M0 643 aa18.21■□□□□ 0.51
CAPNS1-205ENST00000588780 ARL9Q6T311 187 aa18.21■□□□□ 0.51
CAPNS1-205ENST00000588780 Q6ZPA2 131 aa18.21■□□□□ 0.51
CAPNS1-205ENST00000588780 TBC1D15Q8TC07 691 aa18.21■□□□□ 0.51
CAPNS1-205ENST00000588780 SSMEM1Q8WWF3 244 aa18.21■□□□□ 0.51
CAPNS1-205ENST00000588780 SIGLEC11Q96RL6 698 aa18.21■□□□□ 0.51
CAPNS1-205ENST00000588780 WDR55Q9H6Y2 383 aaPredicted RBP18.21■□□□□ 0.51
CAPNS1-205ENST00000588780 MIOXQ9UGB7 285 aa18.21■□□□□ 0.51
CAPNS1-205ENST00000588780 POMT1Q9Y6A1 747 aa18.21■□□□□ 0.51
CAPNS1-205ENST00000588780 A0A1W2PRG6 482 aa18.2■□□□□ 0.5
CAPNS1-205ENST00000588780 PRORSD1PA6NEY8 169 aa18.2■□□□□ 0.5
CAPNS1-205ENST00000588780 BLOC1S5-TXNDC5H3BN57 136 aa18.2■□□□□ 0.5
CAPNS1-205ENST00000588780 TMEM178BH3BS89 294 aa18.2■□□□□ 0.5
CAPNS1-205ENST00000588780 SDHDO14521 159 aa18.2■□□□□ 0.5
CAPNS1-205ENST00000588780 PIP5K1CO60331 668 aa18.2■□□□□ 0.5
CAPNS1-205ENST00000588780 CLPXO76031 633 aa18.2■□□□□ 0.5
CAPNS1-205ENST00000588780 THRBP10828 461 aa18.2■□□□□ 0.5
CAPNS1-205ENST00000588780 EPHA3P29320 983 aa18.2■□□□□ 0.5
CAPNS1-205ENST00000588780 BPIFB3P59826 476 aa18.2■□□□□ 0.5
CAPNS1-205ENST00000588780 PSG4Q00888 419 aa18.2■□□□□ 0.5
CAPNS1-205ENST00000588780 PSG7Q13046 419 aa18.2■□□□□ 0.5
CAPNS1-205ENST00000588780 FADDQ13158 208 aa18.2■□□□□ 0.5
CAPNS1-205ENST00000588780 ZNF74Q16587 644 aa18.2■□□□□ 0.5
CAPNS1-205ENST00000588780 GCNT6Q5T4J0 391 aa18.2■□□□□ 0.5
CAPNS1-205ENST00000588780 REEP3Q6NUK4 255 aa18.2■□□□□ 0.5
CAPNS1-205ENST00000588780 TTC33Q6PID6 262 aaPredicted RBP18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms