RNA–Protein interactions for RNA: ENST00000588687.5

CCDC43-204, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 721 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-204ENST00000588687 CD55P08174 381 aa15.57■□□□□ 0.08
CCDC43-204ENST00000588687 HKR1P10072 659 aa15.57■□□□□ 0.08
CCDC43-204ENST00000588687 UMPSP11172 480 aa15.57■□□□□ 0.08
CCDC43-204ENST00000588687 DRD4P21917 467 aa15.57■□□□□ 0.08
CCDC43-204ENST00000588687 AQP2P41181 271 aa15.57■□□□□ 0.08
CCDC43-204ENST00000588687 GZMMP51124 257 aa15.57■□□□□ 0.08
CCDC43-204ENST00000588687 HSF2Q03933 536 aa15.57■□□□□ 0.08
CCDC43-204ENST00000588687 MOGQ16653 247 aa15.57■□□□□ 0.08
CCDC43-204ENST00000588687 ZNF771Q7L3S4 317 aaPredicted RBP15.57■□□□□ 0.08
CCDC43-204ENST00000588687 MOSPD2Q8NHP6 518 aa15.57■□□□□ 0.08
CCDC43-204ENST00000588687 LIPHQ8WWY8 451 aa15.57■□□□□ 0.08
CCDC43-204ENST00000588687 GEMIN6Q8WXD5 167 aaKnown RBP15.57■□□□□ 0.08
CCDC43-204ENST00000588687 HDAC2Q92769 488 aaKnown RBP15.57■□□□□ 0.08
CCDC43-204ENST00000588687 OR2J1Q9GZK6 312 aa15.57■□□□□ 0.08
CCDC43-204ENST00000588687 ZNF696Q9H7X3 374 aa15.57■□□□□ 0.08
CCDC43-204ENST00000588687 NPHS2Q9NP85 383 aa15.57■□□□□ 0.08
CCDC43-204ENST00000588687 PPIAL4AQ9Y536 164 aa15.57■□□□□ 0.08
CCDC43-204ENST00000588687 A0A1W2PRG6 482 aa15.56■□□□□ 0.08
CCDC43-204ENST00000588687 C5orf49A4QMS7 147 aa15.56■□□□□ 0.08
CCDC43-204ENST00000588687 MCIDASD6RGH6 385 aa15.56■□□□□ 0.08
CCDC43-204ENST00000588687 OR7A10O76100 309 aa15.56■□□□□ 0.08
CCDC43-204ENST00000588687 IGHV2-70P01814 119 aa15.56■□□□□ 0.08
CCDC43-204ENST00000588687 HIST1H2ABP04908 130 aa15.56■□□□□ 0.08
CCDC43-204ENST00000588687 CCNOP22674 350 aa15.56■□□□□ 0.08
CCDC43-204ENST00000588687 DAP3P51398 398 aaKnown RBP15.56■□□□□ 0.08
CCDC43-204ENST00000588687 PSG4Q00888 419 aa15.56■□□□□ 0.08
CCDC43-204ENST00000588687 ZNF718Q3SXZ3 478 aa15.56■□□□□ 0.08
CCDC43-204ENST00000588687 KLF17Q5JT82 389 aaPredicted RBP15.56■□□□□ 0.08
CCDC43-204ENST00000588687 DOK3Q7L591 496 aa15.56■□□□□ 0.08
CCDC43-204ENST00000588687 HIST3H2AQ7L7L0 130 aa15.56■□□□□ 0.08
CCDC43-204ENST00000588687 PATL1Q86TB9 770 aaKnown RBP15.56■□□□□ 0.08
CCDC43-204ENST00000588687 NKAIN4Q8IVV8 208 aa15.56■□□□□ 0.08
CCDC43-204ENST00000588687 SIGLECL1Q8N7X8 197 aa15.56■□□□□ 0.08
CCDC43-204ENST00000588687 AKR7LQ8NHP1 331 aa15.56■□□□□ 0.08
CCDC43-204ENST00000588687 TMEM255BQ8WV15 326 aa15.56■□□□□ 0.08
CCDC43-204ENST00000588687 HIST1H2ACQ93077 130 aa15.56■□□□□ 0.08
CCDC43-204ENST00000588687 WNT5BQ9H1J7 359 aa15.56■□□□□ 0.08
CCDC43-204ENST00000588687 NTN4Q9HB63 628 aa15.56■□□□□ 0.08
CCDC43-204ENST00000588687 MMP26Q9NRE1 261 aa15.56■□□□□ 0.08
CCDC43-204ENST00000588687 INIPQ9NRY2 104 aa15.56■□□□□ 0.08
CCDC43-204ENST00000588687 POLR3KQ9Y2Y1 108 aaPredicted RBP15.56■□□□□ 0.08
CCDC43-204ENST00000588687 H3BSA7 217 aa15.55■□□□□ 0.08
CCDC43-204ENST00000588687 NGFP01138 241 aa15.55■□□□□ 0.08
CCDC43-204ENST00000588687 RBM34P42696 430 aaKnown RBP15.55■□□□□ 0.08
CCDC43-204ENST00000588687 ERVK-25P63136 954 aa15.55■□□□□ 0.08
CCDC43-204ENST00000588687 SLC25A47Q6Q0C1 308 aa15.55■□□□□ 0.08
CCDC43-204ENST00000588687 FOXL2NBQ6ZUU3 175 aa15.55■□□□□ 0.08
CCDC43-204ENST00000588687 CCDC80Q76M96 950 aa15.55■□□□□ 0.08
CCDC43-204ENST00000588687 HDDC2Q7Z4H3 204 aa15.55■□□□□ 0.08
CCDC43-204ENST00000588687 SLC30A8Q8IWU4 369 aa15.55■□□□□ 0.08
CCDC43-204ENST00000588687 STON2Q8WXE9 905 aa15.55■□□□□ 0.08
CCDC43-204ENST00000588687 ZNF48Q96MX3 618 aaPredicted RBP15.55■□□□□ 0.08
CCDC43-204ENST00000588687 C1QTNF5Q9BXJ0 243 aa15.55■□□□□ 0.08
CCDC43-204ENST00000588687 NANOGQ9H9S0 305 aa15.55■□□□□ 0.08
CCDC43-204ENST00000588687 CGGBP1Q9UFW8 167 aaPredicted RBP15.55■□□□□ 0.08
CCDC43-204ENST00000588687 PURGQ9UJV8 347 aaKnown RBP15.55■□□□□ 0.08
CCDC43-204ENST00000588687 PLSCR5A0PG75 271 aa15.54■□□□□ 0.08
CCDC43-204ENST00000588687 ISPDA4D126 451 aa15.54■□□□□ 0.08
CCDC43-204ENST00000588687 DNAJC9-AS1A6NH13 148 aa15.54■□□□□ 0.08
CCDC43-204ENST00000588687 FUT1P19526 365 aa15.54■□□□□ 0.08
CCDC43-204ENST00000588687 TNFRSF1BP20333 461 aa15.54■□□□□ 0.08
CCDC43-204ENST00000588687 GCH1P30793 250 aa15.54■□□□□ 0.08
CCDC43-204ENST00000588687 SEC61A1P61619 476 aaKnown RBP15.54■□□□□ 0.08
CCDC43-204ENST00000588687 PPP1CBP62140 327 aa15.54■□□□□ 0.08
CCDC43-204ENST00000588687 FAM27BQ5VT28 67 aa15.54■□□□□ 0.08
CCDC43-204ENST00000588687 SHISA2Q6UWI4 295 aa15.54■□□□□ 0.08
CCDC43-204ENST00000588687 CLDN22Q8N7P3 220 aa15.54■□□□□ 0.08
CCDC43-204ENST00000588687 POP5Q969H6 163 aaKnown RBP15.54■□□□□ 0.08
CCDC43-204ENST00000588687 OR2H1Q9GZK4 316 aa15.54■□□□□ 0.08
CCDC43-204ENST00000588687 MSL2Q9HCI7 577 aa15.54■□□□□ 0.08
CCDC43-204ENST00000588687 CCNB1IP1Q9NPC3 277 aa15.54■□□□□ 0.08
CCDC43-204ENST00000588687 CYSLTR2Q9NS75 346 aa15.54■□□□□ 0.08
CCDC43-204ENST00000588687 DDX28Q9NUL7 540 aaKnown RBP15.54■□□□□ 0.08
CCDC43-204ENST00000588687 UBAP1Q9NZ09 502 aa15.54■□□□□ 0.08
CCDC43-204ENST00000588687 ZNF69Q9UC07 566 aa15.54■□□□□ 0.08
CCDC43-204ENST00000588687 NPTNQ9Y639 398 aa15.54■□□□□ 0.08
CCDC43-204ENST00000588687 A8MXK9 166 aa15.53■□□□□ 0.08
CCDC43-204ENST00000588687 F5H0A9 414 aaPredicted RBP15.53■□□□□ 0.08
CCDC43-204ENST00000588687 TRAPPC2LH3BP13 241 aa15.53■□□□□ 0.08
CCDC43-204ENST00000588687 IGHMP01871 453 aa15.53■□□□□ 0.08
CCDC43-204ENST00000588687 PRTN3P24158 256 aa15.53■□□□□ 0.08
CCDC43-204ENST00000588687 FPR2P25090 351 aa15.53■□□□□ 0.08
CCDC43-204ENST00000588687 GDI2P50395 445 aaKnown RBP15.53■□□□□ 0.08
CCDC43-204ENST00000588687 SLC3A1Q07837 685 aa15.53■□□□□ 0.08
CCDC43-204ENST00000588687 FOXL1Q12952 345 aa15.53■□□□□ 0.08
CCDC43-204ENST00000588687 VMACQ2NL98 169 aa15.53■□□□□ 0.08
CCDC43-204ENST00000588687 OR10A6Q8NH74 314 aa15.53■□□□□ 0.08
CCDC43-204ENST00000588687 ABHD4Q8TB40 342 aa15.53■□□□□ 0.08
CCDC43-204ENST00000588687 LRRC8CQ8TDW0 803 aa15.53■□□□□ 0.08
CCDC43-204ENST00000588687 NSMAFQ92636 917 aa15.53■□□□□ 0.08
CCDC43-204ENST00000588687 SGTBQ96EQ0 304 aa15.53■□□□□ 0.08
CCDC43-204ENST00000588687 SIGLEC11Q96RL6 698 aa15.53■□□□□ 0.08
CCDC43-204ENST00000588687 STX18Q9P2W9 335 aaKnown RBP15.53■□□□□ 0.08
CCDC43-204ENST00000588687 ZDHHC8Q9ULC8 765 aa15.53■□□□□ 0.08
CCDC43-204ENST00000588687 HIF3AQ9Y2N7 669 aa15.53■□□□□ 0.08
CCDC43-204ENST00000588687 NDUFAF1Q9Y375 327 aa15.53■□□□□ 0.08
CCDC43-204ENST00000588687 NOTCH1P46531 2555 aa15.53■□□□□ 0.08
CCDC43-204ENST00000588687 PIP5K1CO60331 668 aa15.52■□□□□ 0.08
CCDC43-204ENST00000588687 FOXH1O75593 365 aa15.52■□□□□ 0.08
CCDC43-204ENST00000588687 OR5F1O95221 314 aa15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms