RNA–Protein interactions for RNA: ENST00000588516.5

NEDD4L-223, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 5

Gene NEDD4L, Length 1,304 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-223ENST00000588516 DUX4L3P0CJ86 424 aa12.67□□□□□ -0.38
NEDD4L-223ENST00000588516 DUX4L4P0CJ87 422 aa12.67□□□□□ -0.38
NEDD4L-223ENST00000588516 DUX4L5P0CJ88 424 aa12.67□□□□□ -0.38
NEDD4L-223ENST00000588516 DUX4L6P0CJ89 424 aa12.67□□□□□ -0.38
NEDD4L-223ENST00000588516 DUX4L7P0CJ90 424 aa12.67□□□□□ -0.38
NEDD4L-223ENST00000588516 GRPRP30550 384 aa12.67□□□□□ -0.38
NEDD4L-223ENST00000588516 PRSS3P35030 304 aa12.67□□□□□ -0.38
NEDD4L-223ENST00000588516 SOX2P48431 317 aa12.67□□□□□ -0.38
NEDD4L-223ENST00000588516 ZNF81P51508 661 aa12.67□□□□□ -0.38
NEDD4L-223ENST00000588516 SLC26A5P58743 744 aa12.67□□□□□ -0.38
NEDD4L-223ENST00000588516 GLO1Q04760 184 aa12.67□□□□□ -0.38
NEDD4L-223ENST00000588516 ZP4Q12836 540 aa12.67□□□□□ -0.38
NEDD4L-223ENST00000588516 EBPQ15125 230 aaKnown RBP12.67□□□□□ -0.38
NEDD4L-223ENST00000588516 GRK1Q15835 563 aa12.67□□□□□ -0.38
NEDD4L-223ENST00000588516 TEX30Q5JUR7 227 aa12.67□□□□□ -0.38
NEDD4L-223ENST00000588516 ZNF626Q68DY1 528 aa12.67□□□□□ -0.38
NEDD4L-223ENST00000588516 ZNF704Q6ZNC4 412 aaPredicted RBP12.67□□□□□ -0.38
NEDD4L-223ENST00000588516 ESPNLQ6ZVH7 1005 aa12.67□□□□□ -0.38
NEDD4L-223ENST00000588516 NLRC3Q7RTR2 1065 aa12.67□□□□□ -0.38
NEDD4L-223ENST00000588516 DPY19L4Q7Z388 723 aa12.67□□□□□ -0.38
NEDD4L-223ENST00000588516 IZUMO1Q8IYV9 350 aa12.67□□□□□ -0.38
NEDD4L-223ENST00000588516 OR8H3Q8N146 312 aa12.67□□□□□ -0.38
NEDD4L-223ENST00000588516 PLPP5Q8NEB5 264 aa12.67□□□□□ -0.38
NEDD4L-223ENST00000588516 OR1N1Q8NGS0 311 aa12.67□□□□□ -0.38
NEDD4L-223ENST00000588516 ST8SIA1Q92185 356 aa12.67□□□□□ -0.38
NEDD4L-223ENST00000588516 PTX4Q96A99 478 aa12.67□□□□□ -0.38
NEDD4L-223ENST00000588516 CLIP3Q96DZ5 547 aa12.67□□□□□ -0.38
NEDD4L-223ENST00000588516 GAL3ST4Q96RP7 486 aa12.67□□□□□ -0.38
NEDD4L-223ENST00000588516 ORAI3Q9BRQ5 295 aa12.67□□□□□ -0.38
NEDD4L-223ENST00000588516 ALX4Q9H161 411 aaPredicted RBP12.67□□□□□ -0.38
NEDD4L-223ENST00000588516 METTL17Q9H7H0 456 aaPredicted RBP12.67□□□□□ -0.38
NEDD4L-223ENST00000588516 ELOVL3Q9HB03 270 aa12.67□□□□□ -0.38
NEDD4L-223ENST00000588516 DUX4Q9UBX2 424 aa12.67□□□□□ -0.38
NEDD4L-223ENST00000588516 TMED7Q9Y3B3 224 aa12.67□□□□□ -0.38
NEDD4L-223ENST00000588516 HELZ2Q9BYK8 2649 aaKnown RBP12.67□□□□□ -0.38
NEDD4L-223ENST00000588516 CACNA1EQ15878 2313 aa12.67□□□□□ -0.38
NEDD4L-223ENST00000588516 PCNX2A6NKB5 2137 aa12.67□□□□□ -0.38
NEDD4L-223ENST00000588516 GGT3PA6NGU5 568 aa12.66□□□□□ -0.38
NEDD4L-223ENST00000588516 TVP23AA6NH52 213 aa12.66□□□□□ -0.38
NEDD4L-223ENST00000588516 FAM171A2A8MVW0 826 aa12.66□□□□□ -0.38
NEDD4L-223ENST00000588516 SHOXO15266 292 aa12.66□□□□□ -0.38
NEDD4L-223ENST00000588516 OIP5O43482 229 aa12.66□□□□□ -0.38
NEDD4L-223ENST00000588516 ICOSLGO75144 302 aa12.66□□□□□ -0.38
NEDD4L-223ENST00000588516 OR2A4O95047 310 aa12.66□□□□□ -0.38
NEDD4L-223ENST00000588516 AKR7A3O95154 331 aa12.66□□□□□ -0.38
NEDD4L-223ENST00000588516 MELTFP08582 738 aa12.66□□□□□ -0.38
NEDD4L-223ENST00000588516 ZNF823P16415 610 aa12.66□□□□□ -0.38
NEDD4L-223ENST00000588516 CXCL3P19876 107 aa12.66□□□□□ -0.38
NEDD4L-223ENST00000588516 FSTP19883 344 aa12.66□□□□□ -0.38
NEDD4L-223ENST00000588516 VEGFCP49767 419 aa12.66□□□□□ -0.38
NEDD4L-223ENST00000588516 DAP3P51398 398 aaKnown RBP12.66□□□□□ -0.38
NEDD4L-223ENST00000588516 TSPAN5P62079 268 aa12.66□□□□□ -0.38
NEDD4L-223ENST00000588516 GXYLT1Q4G148 440 aa12.66□□□□□ -0.38
NEDD4L-223ENST00000588516 C1orf140Q5VVS0 124 aa12.66□□□□□ -0.38
NEDD4L-223ENST00000588516 CBLN3Q6UW01 205 aa12.66□□□□□ -0.38
NEDD4L-223ENST00000588516 SEZ6L2Q6UXD5 910 aa12.66□□□□□ -0.38
NEDD4L-223ENST00000588516 SFTPA2Q8IWL1 248 aa12.66□□□□□ -0.38
NEDD4L-223ENST00000588516 OR6N1Q8NGY5 312 aa12.66□□□□□ -0.38
NEDD4L-223ENST00000588516 ZNF519Q8TB69 540 aa12.66□□□□□ -0.38
NEDD4L-223ENST00000588516 RNF166Q96A37 237 aaPredicted RBP12.66□□□□□ -0.38
NEDD4L-223ENST00000588516 OMA1Q96E52 524 aa12.66□□□□□ -0.38
NEDD4L-223ENST00000588516 OR2A7Q96R45 310 aa12.66□□□□□ -0.38
NEDD4L-223ENST00000588516 POTEKPQ9BYX7 375 aa12.66□□□□□ -0.38
NEDD4L-223ENST00000588516 WWTR1Q9GZV5 400 aa12.66□□□□□ -0.38
NEDD4L-223ENST00000588516 TSPAN10Q9H1Z9 355 aaPredicted RBP12.66□□□□□ -0.38
NEDD4L-223ENST00000588516 SYT4Q9H2B2 425 aa12.66□□□□□ -0.38
NEDD4L-223ENST00000588516 ANKRD10Q9NXR5 420 aa12.66□□□□□ -0.38
NEDD4L-223ENST00000588516 SEMA5BQ9P283 1151 aa12.66□□□□□ -0.38
NEDD4L-223ENST00000588516 ZNF69Q9UC07 566 aa12.66□□□□□ -0.38
NEDD4L-223ENST00000588516 KIF25Q9UIL4 384 aa12.66□□□□□ -0.38
NEDD4L-223ENST00000588516 SRPK3Q9UPE1 567 aa12.66□□□□□ -0.38
NEDD4L-223ENST00000588516 HEATR5AQ86XA9 2040 aa12.66□□□□□ -0.38
NEDD4L-223ENST00000588516 MAST4O15021 2626 aa12.66□□□□□ -0.38
NEDD4L-223ENST00000588516 HMSDA8MTL9 139 aa12.65□□□□□ -0.38
NEDD4L-223ENST00000588516 A8MUA0 341 aa12.65□□□□□ -0.38
NEDD4L-223ENST00000588516 IDSB3KWA1 339 aa12.65□□□□□ -0.38
NEDD4L-223ENST00000588516 L7N2F9 121 aa12.65□□□□□ -0.38
NEDD4L-223ENST00000588516 SUSD5O60279 629 aa12.65□□□□□ -0.38
NEDD4L-223ENST00000588516 GMDSO60547 372 aa12.65□□□□□ -0.38
NEDD4L-223ENST00000588516 MAS1P04201 325 aa12.65□□□□□ -0.38
NEDD4L-223ENST00000588516 ACHEP22303 614 aa12.65□□□□□ -0.38
NEDD4L-223ENST00000588516 NR0B1P51843 470 aaKnown RBP12.65□□□□□ -0.38
NEDD4L-223ENST00000588516 TAS2R19P59542 299 aa12.65□□□□□ -0.38
NEDD4L-223ENST00000588516 NSDHLQ15738 373 aa12.65□□□□□ -0.38
NEDD4L-223ENST00000588516 PCGF3Q3KNV8 242 aa12.65□□□□□ -0.38
NEDD4L-223ENST00000588516 LGALSLQ3ZCW2 172 aaPredicted RBP12.65□□□□□ -0.38
NEDD4L-223ENST00000588516 TMEM244Q5VVB8 128 aa12.65□□□□□ -0.38
NEDD4L-223ENST00000588516 RAB12Q6IQ22 244 aa12.65□□□□□ -0.38
NEDD4L-223ENST00000588516 PRSS42Q7Z5A4 293 aa12.65□□□□□ -0.38
NEDD4L-223ENST00000588516 PM20D2Q8IYS1 436 aa12.65□□□□□ -0.38
NEDD4L-223ENST00000588516 D2HGDHQ8N465 521 aa12.65□□□□□ -0.38
NEDD4L-223ENST00000588516 FTMTQ8N4E7 242 aa12.65□□□□□ -0.38
NEDD4L-223ENST00000588516 METTL27Q8N6F8 245 aaPredicted RBP12.65□□□□□ -0.38
NEDD4L-223ENST00000588516 NKAIN3Q8N8D7 197 aa12.65□□□□□ -0.38
NEDD4L-223ENST00000588516 OR6M1Q8NGM8 313 aa12.65□□□□□ -0.38
NEDD4L-223ENST00000588516 PIGKQ92643 395 aa12.65□□□□□ -0.38
NEDD4L-223ENST00000588516 SLC41A2Q96JW4 573 aa12.65□□□□□ -0.38
NEDD4L-223ENST00000588516 TSSK2Q96PF2 358 aa12.65□□□□□ -0.38
NEDD4L-223ENST00000588516 SMAD5Q99717 465 aaKnown RBP12.65□□□□□ -0.38
NEDD4L-223ENST00000588516 SLC25A21Q9BQT8 299 aaPredicted RBP12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms